Literature DB >> 25309276

Crystal structure of 1-ethyl-spiro-[imid-az-olidine-4,1'-indane]-2,5-dione.

Wahraan Mohammed Hussein1, Cynthia E Theodore2, S B Benaka Prasad2, M Madaiah3, S Naveen4, N K Lokanath1.   

Abstract

In the title compound, C13H14N2O2, the C5 ring has an envelope conformation with the C atom adjacent to the quaternary C being the flap. The five atoms comprising the n class="Chemical">imidazolidine-2,4-dione ring are almost planar (r.m.s. deviation = 0.004 Å). The dihedral angle between the five-membered rings is 89.66 (10)°. In the crystal, inversion-related mol-ecules are connected via {⋯HNCO}2 synthons. These are linked into a helical supra-molecular chain along [010] by C-H⋯O inter-actions.

Entities:  

Keywords:  C—H⋯O inter­actions; crystal structure; helical supra­molecular chain; hydantoin derivatives; spiro compounds; {⋯HNCO}2 synthons

Year:  2014        PMID: 25309276      PMCID: PMC4186094          DOI: 10.1107/S1600536814017097

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the synthesis and biological activity of hydantoin derivatives, see: Manjunath et al. (2011 ▶, 2012 ▶). For conformational analysis, see: Cremer & Pople (1975 ▶).

Experimental

Crystal data

C13H14N2O2 M = 230.26 Monoclinic, a = 13.7183 (10) Å b = 6.2040 (5) Å c = 15.1944 (11) Å β = 112.865 (3)° V = 1191.56 (16) Å3 Z = 4 Cu Kα radiation μ = 0.72 mm−1 T = 296 K 0.23 × 0.22 × 0.21 mm

Data collection

Bruker X8 Proteum diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1997 ▶) T min = 0.867, T max = 0.867 6730 measured reflections 1953 independent reflections 1742 reflections with I > 2σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.120 S = 1.07 1953 reflections 156 parameters H-atom parameters constrained Δρmax = 0.23 e Å−3 Δρmin = −0.21 e Å−3

Data collection: APEX2 (Bruker, 2013 ▶); cell refinement: SAINT (Bruker, 2013 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: PLATON. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536814017097/tk5331sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814017097/tk5331Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536814017097/tk5331Isup3.cml Click here for additional data file. . DOI: 10.1107/S1600536814017097/tk5331fig1.tif A view of the title mol­ecule, with atom labelling. Displacement ellipsoids are drawn at the 50% probability level. Click here for additional data file. b . DOI: 10.1107/S1600536814017097/tk5331fig2.tif A view along the b axis of the crystal packing of the title compound. CCDC reference: 1015714 Additional supporting information: crystallographic information; 3D view; checkCIF report
C13H14N2O2Z = 4
Mr = 230.26F(000) = 488
Monoclinic, P21/nDx = 1.284 Mg m3
Hall symbol: -P 2ynCu Kα radiation, λ = 1.54178 Å
a = 13.7183 (10) ŵ = 0.72 mm1
b = 6.2040 (5) ÅT = 296 K
c = 15.1944 (11) ÅBlock, colourless
β = 112.865 (3)°0.23 × 0.22 × 0.21 mm
V = 1191.56 (16) Å3
Bruker X8 Proteum diffractometer1742 reflections with I > 2σ(I)
Detector resolution: 10.7 pixels mm-1Rint = 0.027
φ and ω scansθmax = 64.5°, θmin = 3.7°
Absorption correction: multi-scan (SADABS; Sheldrick, 1997)h = −15→15
Tmin = 0.867, Tmax = 0.867k = −3→7
6730 measured reflectionsl = −16→17
1953 independent reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.042H-atom parameters constrained
wR(F2) = 0.120w = 1/[σ2(Fo2) + (0.0649P)2 + 0.277P] where P = (Fo2 + 2Fc2)/3
S = 1.07(Δ/σ)max = 0.001
1953 reflectionsΔρmax = 0.23 e Å3
156 parametersΔρmin = −0.21 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), FC*=KFC[1+0.001XFC2Λ3/SIN(2Θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0109 (13)
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
O60.76182 (10)−0.0363 (2)0.94368 (9)0.0601 (5)
O70.55113 (10)0.2685 (2)1.07873 (8)0.0578 (4)
N10.66453 (10)0.0760 (2)1.02847 (9)0.0424 (4)
N30.57906 (12)0.3540 (2)0.94258 (10)0.0519 (5)
C20.59249 (12)0.2404 (3)1.02119 (11)0.0434 (5)
C40.64286 (12)0.2741 (2)0.89160 (11)0.0409 (5)
C50.69854 (12)0.0850 (2)0.95511 (11)0.0414 (5)
C80.70154 (13)−0.0797 (3)1.10674 (12)0.0510 (5)
C90.79910 (18)−0.0056 (4)1.18691 (15)0.0760 (8)
C100.57793 (11)0.2115 (2)0.78900 (10)0.0383 (4)
C110.50778 (13)0.0411 (3)0.75563 (14)0.0545 (6)
C120.45848 (16)0.0121 (4)0.65796 (16)0.0713 (7)
C130.47830 (15)0.1510 (4)0.59623 (14)0.0741 (8)
C140.54676 (14)0.3205 (4)0.62923 (13)0.0649 (7)
C150.59759 (11)0.3507 (3)0.72680 (11)0.0447 (5)
C160.67693 (15)0.5191 (3)0.77928 (14)0.0586 (6)
C170.72378 (15)0.4361 (3)0.88099 (13)0.0569 (6)
H10.854200.018101.163800.1140*
H20.444500.129300.530700.0890*
H30.784600.126301.212600.1140*
H40.537200.462900.923900.0620*
H50.559000.414000.586700.0780*
H60.41160−0.101900.633800.0860*
H70.49420−0.051100.797800.0650*
H80.730900.533200.753200.0700*
H90.643100.657900.776000.0700*
H100.735600.554300.925800.0680*
H110.790800.365100.893500.0680*
H120.64620−0.103501.130400.0610*
H130.71580−0.216001.082800.0610*
H140.82130−0.113701.236000.1140*
U11U22U33U12U13U23
O60.0622 (8)0.0624 (8)0.0613 (8)0.0248 (6)0.0301 (6)0.0006 (6)
O70.0702 (8)0.0651 (8)0.0502 (7)0.0260 (6)0.0366 (6)0.0125 (6)
N10.0483 (7)0.0410 (7)0.0397 (7)0.0137 (5)0.0190 (6)0.0071 (5)
N30.0724 (9)0.0482 (8)0.0425 (8)0.0301 (7)0.0305 (7)0.0115 (6)
C20.0505 (9)0.0436 (8)0.0382 (8)0.0131 (7)0.0195 (7)0.0021 (7)
C40.0489 (8)0.0398 (8)0.0373 (8)0.0060 (6)0.0205 (7)−0.0005 (6)
C50.0428 (8)0.0411 (8)0.0400 (8)0.0059 (7)0.0159 (6)−0.0035 (6)
C80.0549 (9)0.0473 (9)0.0523 (10)0.0120 (7)0.0225 (8)0.0144 (8)
C90.0771 (13)0.0799 (15)0.0547 (12)0.0073 (11)0.0079 (10)0.0142 (10)
C100.0360 (7)0.0432 (8)0.0382 (8)0.0043 (6)0.0171 (6)0.0003 (6)
C110.0482 (9)0.0568 (10)0.0589 (11)−0.0082 (8)0.0211 (8)−0.0026 (8)
C120.0516 (10)0.0831 (14)0.0681 (14)−0.0145 (10)0.0112 (10)−0.0207 (11)
C130.0497 (10)0.1212 (19)0.0424 (10)−0.0016 (12)0.0080 (8)−0.0116 (11)
C140.0503 (10)0.1028 (16)0.0408 (10)0.0043 (10)0.0167 (8)0.0148 (10)
C150.0367 (8)0.0571 (10)0.0420 (9)0.0049 (7)0.0171 (7)0.0084 (7)
C160.0587 (10)0.0530 (10)0.0633 (12)−0.0060 (8)0.0230 (9)0.0116 (9)
C170.0621 (10)0.0521 (10)0.0516 (10)−0.0131 (8)0.0167 (8)−0.0065 (8)
O6—C51.211 (2)C14—C151.384 (2)
O7—C21.226 (2)C15—C161.496 (3)
N1—C21.394 (2)C16—C171.515 (3)
N1—C51.367 (2)C8—H120.9700
N1—C81.462 (2)C8—H130.9700
N3—C21.337 (2)C9—H10.9600
N3—C41.462 (2)C9—H30.9600
N3—H40.8600C9—H140.9600
C4—C51.523 (2)C11—H70.9300
C4—C101.515 (2)C12—H60.9300
C4—C171.552 (3)C13—H20.9300
C8—C91.490 (3)C14—H50.9300
C10—C111.386 (2)C16—H80.9700
C10—C151.382 (2)C16—H90.9700
C11—C121.383 (3)C17—H100.9700
C12—C131.376 (3)C17—H110.9700
C13—C141.369 (3)
O6···C17i3.392 (2)C17···H2x3.0300
O6···C14ii3.343 (3)H1···C53.0900
O7···N3iii2.886 (2)H1···C13x3.0900
O6···H112.6800H1···C14x3.0600
O6···H132.6700H2···C13viii3.0700
O6···H5ii2.6900H2···C17ix3.0300
O6···H10i2.5600H2···H11ix2.3200
O7···H122.6200H3···H14iv2.4900
O7···H14iv2.7700H4···O7iii2.0500
O7···H4iii2.0500H4···C2iii2.9000
O7···H7v2.5800H5···O6vi2.6900
N3···O7iii2.886 (2)H7···C53.0100
C14···O6vi3.343 (3)H7···O7v2.5800
C17···O6vii3.392 (2)H8···C15vi2.9900
C2···H4iii2.9000H9···C11vii2.9600
C5···H13.0900H10···O6vii2.5600
C5···H73.0100H11···O62.6800
C11···H9i2.9600H11···H2x2.3200
C13···H2viii3.0700H12···O72.6200
C13···H1ix3.0900H13···O62.6700
C14···H1ix3.0600H14···O7xi2.7700
C15···H8ii2.9900H14···H3xi2.4900
C2—N1—C5111.19 (12)C4—C17—C16106.81 (15)
C2—N1—C8124.02 (14)N1—C8—H12109.00
C5—N1—C8124.75 (14)N1—C8—H13109.00
C2—N3—C4113.05 (14)C9—C8—H12109.00
C2—N3—H4123.00C9—C8—H13109.00
C4—N3—H4123.00H12—C8—H13108.00
N1—C2—N3107.70 (14)C8—C9—H1109.00
O7—C2—N1123.90 (15)C8—C9—H3109.00
O7—C2—N3128.41 (17)C8—C9—H14109.00
N3—C4—C17115.79 (12)H1—C9—H3110.00
C5—C4—C10113.84 (11)H1—C9—H14109.00
C5—C4—C17111.22 (14)H3—C9—H14109.00
C10—C4—C17102.56 (13)C10—C11—H7121.00
N3—C4—C5100.46 (12)C12—C11—H7121.00
N3—C4—C10113.47 (14)C11—C12—H6120.00
O6—C5—N1125.62 (14)C13—C12—H6120.00
N1—C5—C4107.59 (13)C12—C13—H2119.00
O6—C5—C4126.79 (15)C14—C13—H2119.00
N1—C8—C9112.28 (16)C13—C14—H5121.00
C4—C10—C15110.52 (13)C15—C14—H5120.00
C4—C10—C11128.23 (14)C15—C16—H8111.00
C11—C10—C15121.24 (15)C15—C16—H9111.00
C10—C11—C12118.18 (18)C17—C16—H8111.00
C11—C12—C13120.4 (2)C17—C16—H9111.00
C12—C13—C14121.37 (19)H8—C16—H9109.00
C13—C14—C15119.00 (19)C4—C17—H10110.00
C10—C15—C16111.52 (14)C4—C17—H11110.00
C10—C15—C14119.80 (17)C16—C17—H10110.00
C14—C15—C16128.68 (17)C16—C17—H11110.00
C15—C16—C17103.82 (15)H10—C17—H11109.00
C5—N1—C2—O7−179.31 (16)N3—C4—C10—C15112.36 (15)
C5—N1—C2—N30.70 (19)C5—C4—C10—C1145.9 (2)
C8—N1—C2—O7−1.6 (3)C5—C4—C10—C15−133.54 (15)
C8—N1—C2—N3178.45 (15)C17—C4—C10—C11166.16 (17)
C2—N1—C5—O6179.35 (16)C17—C4—C10—C15−13.28 (17)
C2—N1—C5—C4−0.48 (17)N3—C4—C17—C16−103.10 (17)
C8—N1—C5—O61.6 (3)C5—C4—C17—C16143.07 (15)
C8—N1—C5—C4−178.21 (14)C10—C4—C17—C1621.02 (17)
C2—N1—C8—C9−90.8 (2)C4—C10—C11—C12−178.69 (18)
C5—N1—C8—C986.6 (2)C15—C10—C11—C120.7 (3)
C4—N3—C2—O7179.36 (17)C4—C10—C15—C14179.40 (16)
C4—N3—C2—N1−0.64 (19)C4—C10—C15—C160.3 (2)
C2—N3—C4—C50.34 (17)C11—C10—C15—C14−0.1 (3)
C2—N3—C4—C10122.24 (15)C11—C10—C15—C16−179.18 (16)
C2—N3—C4—C17−119.53 (16)C10—C11—C12—C13−0.7 (3)
N3—C4—C5—O6−179.74 (16)C11—C12—C13—C140.0 (4)
N3—C4—C5—N10.09 (16)C12—C13—C14—C150.6 (3)
C10—C4—C5—O658.6 (2)C13—C14—C15—C10−0.6 (3)
C10—C4—C5—N1−121.54 (15)C13—C14—C15—C16178.3 (2)
C17—C4—C5—O6−56.6 (2)C10—C15—C16—C1713.2 (2)
C17—C4—C5—N1123.20 (14)C14—C15—C16—C17−165.8 (2)
N3—C4—C10—C11−68.2 (2)C15—C16—C17—C4−21.00 (19)
D—H···AD—HH···AD···AD—H···A
N3—H4···O7iii0.862.052.886 (2)163
C11—H7···O7v0.932.583.501 (2)173
C17—H10···O6vii0.972.563.392 (2)143
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N3—H4⋯O7i 0.862.052.886 (2)163
C11—H7⋯O7ii 0.932.583.501 (2)173
C17—H10⋯O6iii 0.972.563.392 (2)143

Symmetry codes: (i) ; (ii) ; (iii) .

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Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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1.  Crystal structure of 1'-(2-methyl-prop-yl)-2,3-di-hydro-spiro-[1-benzo-thio-pyran-4,4'-imidazolidine]-2',5'-dione.

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