Literature DB >> 25309243

Crystal structure of 4-(4-meth-oxy-phen-yl)-7,7-dimethyl-2-methyl-amino-3-nitro-7,8-di-hydro-4H-chromen-5(6H)-one.

S Antony Inglebert1, Jayabal Kamalraja2, K Sethusankar3, Paramasivam T Perumal2.   

Abstract

In the title compound, C19H22N2O5, the six-membered carbocyclic ring of the chromene moiety adopts an envelope conformation with the dimethyl-substituted C atom as the flap. The pyran ring has a flat-boat conformation. The meth-oxy-phenyl ring is orthogonal to the mean plane of the chromene moiety, with a dihedral angle of 89.97 (8)°. The amine N atom deviates from the chromene mean plane by 0.1897 (16) Å. The methyl-amine and the nitro group are involved in an intra-molecular N-H⋯O hydrogen bond which generates an S(6) ring motif. They are slightly twisted out of the plane of the chromene moiety with torsion angles of C-N-C-O(pyran) = 2.2 (3)° and O(nitro)-N-C-C = -5.6 (2)°. In the crystal, there are only C-H⋯π inter-actions present, forming inversion-related dimers.

Entities:  

Keywords:  C—H⋯π inter­actions; chromene; crystal structure; intra­molecular hydrogen bonding

Year:  2014        PMID: 25309243      PMCID: PMC4186140          DOI: 10.1107/S160053681401589X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological and pharmacological properties of chromenes and their derivatives, see: Shah et al. (2013 ▶).For related structures, see: Narayanan et al. (2013 ▶); Inglebert et al. (2014 ▶).

Experimental

Crystal data

C19H22N2O5 M = 358.39 Monoclinic, a = 9.6793 (7) Å b = 16.3059 (12) Å c = 11.9205 (8) Å β = 106.128 (2)° V = 1807.4 (2) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 293 K 0.30 × 0.25 × 0.20 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.972, T max = 0.981 25137 measured reflections 3429 independent reflections 2369 reflections with I > 2σ(I) R int = 0.038

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.140 S = 1.04 3429 reflections 239 parameters H-atom parameters constrained Δρmax = 0.30 e Å−3 Δρmin = −0.23 e Å−3

Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S160053681401589X/su2750sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681401589X/su2750Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S160053681401589X/su2750Isup3.cml Click here for additional data file. . DOI: 10.1107/S160053681401589X/su2750fig1.tif A view of the mol­ecular structure of the title mol­ecule, with atom labelling. Displacement ellipsoids are drawn at the 30% probability level. CCDC reference: 1012691 Additional supporting information: crystallographic information; 3D view; checkCIF report
C19H22N2O5F(000) = 760
Mr = 358.39Dx = 1.317 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -p 2ybcCell parameters from 3429 reflections
a = 9.6793 (7) Åθ = 2.2–25.7°
b = 16.3059 (12) ŵ = 0.10 mm1
c = 11.9205 (8) ÅT = 293 K
β = 106.128 (2)°Block, colourless
V = 1807.4 (2) Å30.30 × 0.25 × 0.20 mm
Z = 4
Bruker Kappa APEXII CCD diffractometer3429 independent reflections
Radiation source: fine-focus sealed tube2369 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.038
ω and φ scanθmax = 25.7°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2008)h = −11→11
Tmin = 0.972, Tmax = 0.981k = −19→19
25137 measured reflectionsl = −14→14
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.140H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0743P)2 + 0.445P] where P = (Fo2 + 2Fc2)/3
3429 reflections(Δ/σ)max < 0.001
239 parametersΔρmax = 0.30 e Å3
0 restraintsΔρmin = −0.23 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.3188 (2)0.60966 (13)0.57925 (17)0.0418 (5)
C20.3527 (2)0.64520 (13)0.68892 (17)0.0438 (5)
H20.41550.68950.70660.053*
C30.2913 (2)0.61357 (12)0.77209 (16)0.0404 (5)
H30.31370.63760.84570.049*
C40.19830 (18)0.54764 (11)0.74909 (15)0.0338 (4)
C50.1649 (2)0.51385 (12)0.63813 (16)0.0397 (5)
H50.10090.47010.62000.048*
C60.2248 (2)0.54378 (13)0.55413 (17)0.0450 (5)
H60.20200.51980.48050.054*
C70.1347 (2)0.51384 (11)0.84356 (15)0.0364 (4)
H70.07130.46780.81080.044*
C80.24959 (19)0.48391 (11)0.94849 (16)0.0351 (4)
C90.29187 (19)0.52757 (11)1.05297 (16)0.0370 (4)
C100.09369 (19)0.61784 (12)0.98350 (15)0.0369 (4)
C110.0227 (2)0.68872 (12)1.02260 (17)0.0437 (5)
H11A0.09550.72541.06860.052*
H11B−0.03480.66921.07210.052*
C12−0.0740 (2)0.73612 (12)0.91906 (17)0.0420 (5)
C13−0.1698 (2)0.67469 (13)0.83584 (18)0.0454 (5)
H13A−0.24070.65380.87230.054*
H13B−0.22120.70350.76540.054*
C14−0.0921 (2)0.60304 (12)0.80176 (17)0.0408 (5)
C150.04735 (19)0.57886 (11)0.88193 (15)0.0349 (4)
C160.4646 (3)0.7040 (2)0.5103 (3)0.0911 (10)
H16A0.41930.74890.53820.137*
H16B0.48450.71930.43860.137*
H16C0.55290.69030.56750.137*
C170.4303 (3)0.55740 (15)1.25477 (19)0.0601 (6)
H17A0.46080.61161.24100.090*
H17B0.50600.53051.31240.090*
H17C0.34630.56101.28240.090*
C18−0.1656 (3)0.79636 (15)0.9648 (2)0.0601 (6)
H18A−0.22910.82490.90040.090*
H18B−0.10430.83521.01580.090*
H18C−0.22110.76701.00710.090*
C190.0178 (2)0.78296 (13)0.85468 (19)0.0513 (5)
H19A−0.04370.81350.79140.077*
H19B0.07390.74480.82440.077*
H19C0.08070.81990.90780.077*
N10.39661 (17)0.51069 (10)1.14645 (13)0.0440 (4)
H10.44950.46881.14360.053*
N20.32201 (17)0.41331 (10)0.93523 (14)0.0408 (4)
O10.21955 (14)0.59653 (8)1.06663 (11)0.0443 (4)
O20.28171 (16)0.37471 (9)0.84138 (13)0.0546 (4)
O30.42684 (15)0.38750 (9)1.01655 (13)0.0517 (4)
O4−0.14344 (16)0.56445 (10)0.71241 (13)0.0605 (4)
O50.37227 (17)0.63553 (10)0.49054 (13)0.0606 (5)
U11U22U33U12U13U23
C10.0398 (10)0.0504 (12)0.0366 (11)0.0007 (9)0.0128 (8)0.0035 (9)
C20.0412 (11)0.0462 (12)0.0436 (12)−0.0084 (9)0.0110 (9)−0.0018 (9)
C30.0432 (11)0.0445 (11)0.0322 (10)−0.0045 (9)0.0081 (8)−0.0080 (8)
C40.0346 (9)0.0337 (10)0.0323 (10)0.0019 (7)0.0078 (7)−0.0001 (8)
C50.0441 (11)0.0368 (10)0.0365 (11)−0.0061 (8)0.0084 (8)−0.0053 (8)
C60.0526 (12)0.0500 (12)0.0319 (11)−0.0018 (10)0.0107 (9)−0.0061 (9)
C70.0386 (10)0.0352 (10)0.0342 (10)−0.0030 (8)0.0082 (8)−0.0022 (8)
C80.0391 (10)0.0317 (10)0.0351 (10)0.0025 (8)0.0112 (8)0.0024 (8)
C90.0372 (10)0.0366 (10)0.0375 (11)0.0015 (8)0.0111 (8)0.0043 (8)
C100.0376 (10)0.0406 (11)0.0317 (10)0.0042 (8)0.0085 (8)0.0035 (8)
C110.0490 (11)0.0441 (11)0.0385 (11)0.0079 (9)0.0132 (9)−0.0005 (9)
C120.0412 (10)0.0443 (11)0.0417 (11)0.0070 (9)0.0134 (9)0.0036 (9)
C130.0341 (10)0.0528 (12)0.0486 (12)0.0027 (9)0.0103 (9)0.0055 (10)
C140.0364 (10)0.0482 (11)0.0375 (11)−0.0051 (9)0.0097 (8)0.0009 (9)
C150.0351 (9)0.0360 (10)0.0336 (10)−0.0014 (8)0.0094 (8)0.0016 (8)
C160.091 (2)0.115 (3)0.0780 (19)−0.0483 (19)0.0415 (16)0.0042 (18)
C170.0600 (14)0.0704 (16)0.0411 (12)0.0102 (12)−0.0009 (10)−0.0052 (11)
C180.0615 (14)0.0553 (14)0.0684 (15)0.0178 (11)0.0262 (12)0.0044 (12)
C190.0532 (12)0.0467 (12)0.0553 (13)−0.0012 (10)0.0174 (10)0.0075 (10)
N10.0428 (9)0.0486 (10)0.0372 (9)0.0080 (8)0.0055 (7)0.0017 (8)
N20.0439 (9)0.0375 (9)0.0428 (10)0.0028 (7)0.0149 (8)0.0026 (8)
O10.0483 (8)0.0448 (8)0.0339 (7)0.0104 (6)0.0015 (6)−0.0029 (6)
O20.0650 (10)0.0459 (8)0.0510 (9)0.0057 (7)0.0132 (7)−0.0114 (7)
O30.0494 (8)0.0493 (9)0.0529 (9)0.0145 (7)0.0084 (7)0.0039 (7)
O40.0483 (9)0.0725 (11)0.0514 (9)0.0013 (8)−0.0017 (7)−0.0156 (8)
O50.0664 (10)0.0765 (11)0.0458 (9)−0.0169 (8)0.0269 (8)0.0003 (8)
C1—O51.367 (2)C12—C181.522 (3)
C1—C21.384 (3)C12—C131.529 (3)
C1—C61.386 (3)C12—C191.530 (3)
C2—C31.389 (3)C13—C141.505 (3)
C2—H20.9300C13—H13A0.9700
C3—C41.380 (3)C13—H13B0.9700
C3—H30.9300C14—O41.218 (2)
C4—C51.386 (3)C14—C151.474 (3)
C4—C71.528 (2)C16—O51.408 (3)
C5—C61.378 (3)C16—H16A0.9600
C5—H50.9300C16—H16B0.9600
C6—H60.9300C16—H16C0.9600
C7—C151.504 (3)C17—N11.456 (3)
C7—C81.505 (3)C17—H17A0.9600
C7—H70.9800C17—H17B0.9600
C8—N21.380 (2)C17—H17C0.9600
C8—C91.394 (3)C18—H18A0.9600
C9—N11.311 (2)C18—H18B0.9600
C9—O11.358 (2)C18—H18C0.9600
C10—C151.330 (3)C19—H19A0.9600
C10—O11.384 (2)C19—H19B0.9600
C10—C111.485 (3)C19—H19C0.9600
C11—C121.534 (3)N1—H10.8600
C11—H11A0.9700N2—O21.248 (2)
C11—H11B0.9700N2—O31.265 (2)
O5—C1—C2124.08 (18)C14—C13—C12115.15 (16)
O5—C1—C6116.05 (17)C14—C13—H13A108.5
C2—C1—C6119.87 (18)C12—C13—H13A108.5
C1—C2—C3118.87 (18)C14—C13—H13B108.5
C1—C2—H2120.6C12—C13—H13B108.5
C3—C2—H2120.6H13A—C13—H13B107.5
C4—C3—C2122.16 (17)O4—C14—C15120.41 (19)
C4—C3—H3118.9O4—C14—C13121.60 (18)
C2—C3—H3118.9C15—C14—C13117.96 (17)
C3—C4—C5117.75 (17)C10—C15—C14118.59 (17)
C3—C4—C7120.57 (16)C10—C15—C7122.52 (16)
C5—C4—C7121.68 (16)C14—C15—C7118.83 (16)
C6—C5—C4121.28 (18)O5—C16—H16A109.5
C6—C5—H5119.4O5—C16—H16B109.5
C4—C5—H5119.4H16A—C16—H16B109.5
C5—C6—C1120.07 (18)O5—C16—H16C109.5
C5—C6—H6120.0H16A—C16—H16C109.5
C1—C6—H6120.0H16B—C16—H16C109.5
C15—C7—C8108.89 (15)N1—C17—H17A109.5
C15—C7—C4110.20 (15)N1—C17—H17B109.5
C8—C7—C4111.93 (15)H17A—C17—H17B109.5
C15—C7—H7108.6N1—C17—H17C109.5
C8—C7—H7108.6H17A—C17—H17C109.5
C4—C7—H7108.6H17B—C17—H17C109.5
N2—C8—C9119.75 (16)C12—C18—H18A109.5
N2—C8—C7117.19 (16)C12—C18—H18B109.5
C9—C8—C7122.87 (16)H18A—C18—H18B109.5
N1—C9—O1112.01 (16)C12—C18—H18C109.5
N1—C9—C8128.20 (17)H18A—C18—H18C109.5
O1—C9—C8119.79 (16)H18B—C18—H18C109.5
C15—C10—O1122.61 (17)C12—C19—H19A109.5
C15—C10—C11126.11 (17)C12—C19—H19B109.5
O1—C10—C11111.28 (15)H19A—C19—H19B109.5
C10—C11—C12111.81 (16)C12—C19—H19C109.5
C10—C11—H11A109.3H19A—C19—H19C109.5
C12—C11—H11A109.3H19B—C19—H19C109.5
C10—C11—H11B109.3C9—N1—C17125.02 (17)
C12—C11—H11B109.3C9—N1—H1117.5
H11A—C11—H11B107.9C17—N1—H1117.5
C18—C12—C13110.27 (17)O2—N2—O3120.24 (16)
C18—C12—C19109.56 (18)O2—N2—C8118.77 (16)
C13—C12—C19109.51 (16)O3—N2—C8120.99 (16)
C18—C12—C11108.80 (17)C9—O1—C10120.16 (14)
C13—C12—C11108.45 (16)C1—O5—C16118.32 (18)
C19—C12—C11110.24 (16)
O5—C1—C2—C3179.89 (18)C19—C12—C13—C1469.9 (2)
C6—C1—C2—C30.1 (3)C11—C12—C13—C14−50.4 (2)
C1—C2—C3—C40.3 (3)C12—C13—C14—O4−157.06 (19)
C2—C3—C4—C5−1.1 (3)C12—C13—C14—C1524.8 (3)
C2—C3—C4—C7179.10 (17)O1—C10—C15—C14176.63 (16)
C3—C4—C5—C61.4 (3)C11—C10—C15—C14−4.4 (3)
C7—C4—C5—C6−178.82 (17)O1—C10—C15—C7−6.2 (3)
C4—C5—C6—C1−0.9 (3)C11—C10—C15—C7172.76 (18)
O5—C1—C6—C5−179.63 (18)O4—C14—C15—C10−174.04 (19)
C2—C1—C6—C50.1 (3)C13—C14—C15—C104.1 (3)
C3—C4—C7—C1560.8 (2)O4—C14—C15—C78.7 (3)
C5—C4—C7—C15−119.02 (18)C13—C14—C15—C7−173.13 (16)
C3—C4—C7—C8−60.5 (2)C8—C7—C15—C1017.8 (2)
C5—C4—C7—C8119.66 (19)C4—C7—C15—C10−105.4 (2)
C15—C7—C8—N2167.42 (15)C8—C7—C15—C14−165.09 (16)
C4—C7—C8—N2−70.5 (2)C4—C7—C15—C1471.8 (2)
C15—C7—C8—C9−17.7 (2)O1—C9—N1—C172.2 (3)
C4—C7—C8—C9104.4 (2)C8—C9—N1—C17−177.0 (2)
N2—C8—C9—N10.0 (3)C9—C8—N2—O2179.39 (17)
C7—C8—C9—N1−174.71 (18)C7—C8—N2—O2−5.6 (2)
N2—C8—C9—O1−179.21 (16)C9—C8—N2—O3−0.2 (3)
C7—C8—C9—O16.1 (3)C7—C8—N2—O3174.84 (16)
C15—C10—C11—C12−23.7 (3)N1—C9—O1—C10−171.21 (16)
O1—C10—C11—C12155.32 (16)C8—C9—O1—C108.1 (3)
C10—C11—C12—C18168.69 (17)C15—C10—O1—C9−8.3 (3)
C10—C11—C12—C1348.7 (2)C11—C10—O1—C9172.65 (16)
C10—C11—C12—C19−71.2 (2)C2—C1—O5—C16−1.8 (3)
C18—C12—C13—C14−169.46 (17)C6—C1—O5—C16178.0 (2)
D—H···AD—HH···AD···AD—H···A
C17—H17B···Cg2i0.962.783.652142
N1—H1···O30.861.982.602 (2)128
Table 1

Hydrogen-bond geometry (Å, °)

Cg2 is the centroid of the C1–C6 ring.

D—H⋯A D—HH⋯A DA D—H⋯A
C17—H17BCg2i 0.962.783.652142
N1—H1⋯O30.861.982.602 (2)128

Symmetry code: (i) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  4-(4-Bromo-phen-yl)-2-methyl-amino-3-nitro-5,6,7,8-tetra-hydro-4H-chromen-5-one.

Authors:  P Narayanan; Jayabal Kamalraja; Paramasivam T Perumal; K Sethusankar
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-05-22

3.  4-(4-Bromo-phen-yl)-7,7-dimethyl-2-methyl-amino-3-nitro-7,8-di-hydro-4H-chromen-5(6H)-one including an unknown solvate.

Authors:  S Antony Inglebert; Jayabal Kamalraja; K Sethusankar; Gnanasambandam Vasuki
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-04-18

4.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  4 in total

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