Literature DB >> 25288638

Structural and functional characterization of ybr137wp implicates its involvement in the targeting of tail-anchored proteins to membranes.

Yi-Hung Yeh1, Tai-Wen Lin2, Yi-Chuan Li3, Jung-Yu Tung1, Cheng-Yuan Lin1, Chwan-Deng Hsiao4.   

Abstract

Nearly 5% of membrane proteins are guided to nuclear, endoplasmic reticulum (ER), mitochondrial, Golgi, or peroxisome membranes by their C-terminal transmembrane domain and are classified as tail-anchored (TA) membrane proteins. In Saccharomyces cerevisiae, the guided entry of TA protein (GET) pathway has been shown to function in the delivery of TA proteins to the ER. The sorting complex for this pathway is comprised of Sgt2, Get4, and Get5 and facilitates the loading of nascent tail-anchored proteins onto the Get3 ATPase. Multiple pulldown assays also indicated that Ybr137wp associates with this complex in vivo. Here, we report a 2.8-Å-resolution crystal structure for Ybr137wp from Saccharomyces cerevisiae. The protein is a decamer in the crystal and also in solution, as observed by size exclusion chromatography and analytical ultracentrifugation. In addition, isothermal titration calorimetry indicated that the C-terminal acidic motif of Ybr137wp interacts with the tetratricopeptide repeat (TPR) domain of Sgt2. Moreover, an in vivo study demonstrated that Ybr137wp is induced in yeast exiting the log phase and ameliorates the defect of TA protein delivery and cell viability derived by the impaired GET system under starvation conditions. Therefore, this study suggests a possible role for Ybr137wp related to targeting of tail-anchored proteins.
Copyright © 2014, American Society for Microbiology. All Rights Reserved.

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Year:  2014        PMID: 25288638      PMCID: PMC4248727          DOI: 10.1128/MCB.00697-14

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  52 in total

Review 1.  SNARE-mediated membrane fusion.

Authors:  Y A Chen; R H Scheller
Journal:  Nat Rev Mol Cell Biol       Date:  2001-02       Impact factor: 94.444

2.  Targeting of C-terminal (tail)-anchored proteins: understanding how cytoplasmic activities are anchored to intracellular membranes.

Authors:  B Wattenberg; T Lithgow
Journal:  Traffic       Date:  2001-01       Impact factor: 6.215

Review 3.  Biogenesis of tail-anchored proteins.

Authors:  N Borgese; S Brambillasca; P Soffientini; M Yabal; M Makarow
Journal:  Biochem Soc Trans       Date:  2003-12       Impact factor: 5.407

4.  Sedimentation equilibrium analysis of protein interactions with global implicit mass conservation constraints and systematic noise decomposition.

Authors:  Jennifer Vistica; Julie Dam; Andrea Balbo; Emine Yikilmaz; Roy A Mariuzza; Tracey A Rouault; Peter Schuck
Journal:  Anal Biochem       Date:  2004-03-15       Impact factor: 3.365

5.  Genomewide analysis reveals novel pathways affecting endoplasmic reticulum homeostasis, protein modification and quality control.

Authors:  Alenka Copic; Mariana Dorrington; Silvere Pagant; Justine Barry; Marcus C S Lee; Indira Singh; John L Hartman; Elizabeth A Miller
Journal:  Genetics       Date:  2009-05-11       Impact factor: 4.562

6.  Size-distribution analysis of macromolecules by sedimentation velocity ultracentrifugation and lamm equation modeling.

Authors:  P Schuck
Journal:  Biophys J       Date:  2000-03       Impact factor: 4.033

7.  A brain-specific isoform of small glutamine-rich tetratricopeptide repeat-containing protein binds to Hsc70 and the cysteine string protein.

Authors:  Sönke Tobaben; Frederique Varoqueaux; Nils Brose; Bernd Stahl; Guido Meyer
Journal:  J Biol Chem       Date:  2003-07-23       Impact factor: 5.157

8.  Targeting of a tail-anchored protein to endoplasmic reticulum and mitochondrial outer membrane by independent but competing pathways.

Authors:  N Borgese; I Gazzoni; M Barberi; S Colombo; E Pedrazzini
Journal:  Mol Biol Cell       Date:  2001-08       Impact factor: 4.138

9.  A graphical user interface to the CCP4 program suite.

Authors:  Elizabeth Potterton; Peter Briggs; Maria Turkenburg; Eleanor Dodson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2003-06-27

Review 10.  The tale of tail-anchored proteins: coming from the cytosol and looking for a membrane.

Authors:  Nica Borgese; Sara Colombo; Emanuela Pedrazzini
Journal:  J Cell Biol       Date:  2003-06-23       Impact factor: 10.539

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  3 in total

1.  Substrate relay in an Hsp70-cochaperone cascade safeguards tail-anchored membrane protein targeting.

Authors:  Hyunju Cho; Shu-Ou Shan
Journal:  EMBO J       Date:  2018-07-04       Impact factor: 11.598

2.  The Crystal Structure of the C-Terminal Domain of the Salmonella enterica PduO Protein: An Old Fold with a New Heme-Binding Mode.

Authors:  Darío Ortiz de Orué Lucana; Neal Hickey; Michael Hensel; Johann P Klare; Silvano Geremia; Tatiana Tiufiakova; Andrew E Torda
Journal:  Front Microbiol       Date:  2016-06-28       Impact factor: 5.640

3.  Structure and Interactions of the TPR Domain of Sgt2 with Yeast Chaperones and Ybr137wp.

Authors:  Ewelina M Krysztofinska; Nicola J Evans; Arjun Thapaliya; James W Murray; Rhodri M L Morgan; Santiago Martinez-Lumbreras; Rivka L Isaacson
Journal:  Front Mol Biosci       Date:  2017-10-11
  3 in total

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