Literature DB >> 25286955

Production, crystallization and preliminary crystallographic analysis of Allochromatium vinosum thiosulfate dehydrogenase TsdA, an unusual acidophilic c-type cytochrome.

José A Brito1, André Gutierres1, Kevin Denkmann2, Christiane Dahl2, Margarida Archer1.   

Abstract

The ability to perform the very simple oxidation of two molecules of thiosulfate to tetrathionate is widespread among prokaryotes. Despite the prevalent occurrence of tetrathionate formation and its well documented significance within the sulfur cycle, little is known about the enzymes that catalyze the oxidative condensation of two thiosulfate anions. To fill this gap, the thiosulfate dehydrogenase (TsdA) enzyme from the purple sulfur bacterium Allochromatium vinosum was recombinantly expressed in Escherichia coli, purified and crystallized, and a crystallographic data set was collected. The crystals belonged to the monoclinic space group C2, with unit-cell parameters a = 79.2, b = 69.9, c = 57.9 Å, β = 129.3°, contained one monomer per asymmetric unit and diffracted to a resolution of 1.98 Å.

Entities:  

Keywords:  Allochromatium vinosum; c-type cytochrome; sulfur metabolism; thiosulfate dehydrogenase

Mesh:

Substances:

Year:  2014        PMID: 25286955      PMCID: PMC4188095          DOI: 10.1107/S2053230X14019384

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  11 in total

1.  DsrJ, an essential part of the DsrMKJOP transmembrane complex in the purple sulfur bacterium Allochromatium vinosum, is an unusual triheme cytochrome c.

Authors:  Fabian Grein; Sofia S Venceslau; Lilian Schneider; Peter Hildebrandt; Smilja Todorovic; Inês A C Pereira; Christiane Dahl
Journal:  Biochemistry       Date:  2010-09-28       Impact factor: 3.162

2.  Thiosulfate dehydrogenase: a widespread unusual acidophilic c-type cytochrome.

Authors:  Kevin Denkmann; Fabian Grein; Renate Zigann; Anna Siemen; Johannes Bergmann; Sebastian van Helmont; Anne Nicolai; Inês A C Pereira; Christiane Dahl
Journal:  Environ Microbiol       Date:  2012-07-11       Impact factor: 5.491

3.  Structural basis for the oxidation of thiosulfate by a sulfur cycle enzyme.

Authors:  Vicki A Bamford; Stefano Bruno; Tim Rasmussen; Corinne Appia-Ayme; Myles R Cheesman; Ben C Berks; Andrew M Hemmings
Journal:  EMBO J       Date:  2002-11-01       Impact factor: 11.598

4.  Linking crystallographic model and data quality.

Authors:  P Andrew Karplus; Kay Diederichs
Journal:  Science       Date:  2012-05-25       Impact factor: 47.728

5.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

6.  An improved staining procedure for the detection of the peroxidase activity of cytochrome P-450 on sodium dodecyl sulfate polyacrylamide gels.

Authors:  P E Thomas; D Ryan; W Levin
Journal:  Anal Biochem       Date:  1976-09       Impact factor: 3.365

7.  Novel genes of the dsr gene cluster and evidence for close interaction of Dsr proteins during sulfur oxidation in the phototrophic sulfur bacterium Allochromatium vinosum.

Authors:  Christiane Dahl; Sabine Engels; Andrea S Pott-Sperling; Andrea Schulte; Johannes Sander; Yvonne Lübbe; Oliver Deuster; Daniel C Brune
Journal:  J Bacteriol       Date:  2005-02       Impact factor: 3.490

8.  Tetrathionate stimulated growth of Campylobacter jejuni identifies a new type of bi-functional tetrathionate reductase (TsdA) that is widely distributed in bacteria.

Authors:  Yang-Wei Liu; Kevin Denkmann; Konrad Kosciow; Christiane Dahl; David J Kelly
Journal:  Mol Microbiol       Date:  2013-03-11       Impact factor: 3.501

9.  Overproduction of the Bradyrhizobium japonicum c-type cytochrome subunits of the cbb3 oxidase in Escherichia coli.

Authors:  E Arslan; H Schulz; R Zufferey; P Künzler; L Thöny-Meyer
Journal:  Biochem Biophys Res Commun       Date:  1998-10-29       Impact factor: 3.575

10.  Better models by discarding data?

Authors:  K Diederichs; P A Karplus
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2013-06-15
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  3 in total

1.  Thiosulfate dehydrogenase (TsdA) from Allochromatium vinosum: structural and functional insights into thiosulfate oxidation.

Authors:  José A Brito; Kevin Denkmann; Inês A C Pereira; Margarida Archer; Christiane Dahl
Journal:  J Biol Chem       Date:  2015-02-11       Impact factor: 5.157

2.  X-ray-induced photoreduction of heme metal centers rapidly induces active-site perturbations in a protein-independent manner.

Authors:  Vera Pfanzagl; John H Beale; Hanna Michlits; Daniel Schmidt; Thomas Gabler; Christian Obinger; Kristina Djinović-Carugo; Stefan Hofbauer
Journal:  J Biol Chem       Date:  2020-07-28       Impact factor: 5.486

3.  A novel bacterial thiosulfate oxidation pathway provides a new clue about the formation of zero-valent sulfur in deep sea.

Authors:  Jing Zhang; Rui Liu; Shichuan Xi; Ruining Cai; Xin Zhang; Chaomin Sun
Journal:  ISME J       Date:  2020-05-26       Impact factor: 10.302

  3 in total

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