Literature DB >> 25283988

Gene redundancy of two-component (chloro)phenol hydroxylases in Rhodococcus opacus 1CP.

Janosch A D Gröning1, Dirk Eulberg2, Dirk Tischler3, Stefan R Kaschabek1, Michael Schlömann1.   

Abstract

Among other factors, a distinct gene redundancy is discussed to facilitate high metabolic versatility of rhodococci. Rhodococcus opacus 1CP is a typical member in that respect and degrades a multitude of (chlorinated) aromatic compounds. In contrast to the central pathways of aromatic degradation in strain 1CP, little is known about the degree of gene redundancy and to what extent this is reflected on protein level within the steps of peripheral degradation. By means of degenerated primers deduced from tryptic peptides of a purified phenol hydroxylase component and using the amplified fragment as a labelled probe against genomic 1CP-DNA, three gene sets encoding three different two-component phenol hydroxylases pheA1/pheA2(1-3) could be identified. One of them was found to be located on the megaplasmid p1CP, which confirms the role of these elements for metabolic versatility. Protein chromatography of phenol- and 4-chlorophenol-grown 1CP-biomass gave first evidences on a functional expression of these oxygenases, which could be initially characterised in respect of their substrate specificity.
© 2014 Federation of European Microbiological Societies.

Entities:  

Keywords:  (chloro)phenol degradation; Actinobacteria; chlorophenol monooxygenase; flavin dependent phenol monooxygenase; isoenzymes; refolded inclusion bodies

Mesh:

Substances:

Year:  2015        PMID: 25283988     DOI: 10.1111/1574-6968.12616

Source DB:  PubMed          Journal:  FEMS Microbiol Lett        ISSN: 0378-1097            Impact factor:   2.742


  11 in total

1.  Diversity shift in bacterial phenol hydroxylases driven by alkyl-phenols in oil refinery wastewaters.

Authors:  Besma Harzallah; Hacène Bousseboua; Yves Jouanneau
Journal:  Environ Sci Pollut Res Int       Date:  2017-04-21       Impact factor: 4.223

2.  Genome sequencing reveals mechanisms for heavy metal resistance and polycyclic aromatic hydrocarbon degradation in Delftia lacustris strain LZ-C.

Authors:  Wenyang Wu; Haiying Huang; Zhenmin Ling; Zhengsheng Yu; Yiming Jiang; Pu Liu; Xiangkai Li
Journal:  Ecotoxicology       Date:  2015-11-20       Impact factor: 2.823

3.  Catalytic and hydrodynamic properties of styrene monooxygenases from Rhodococcus opacus 1CP are modulated by cofactor binding.

Authors:  Anika Riedel; Thomas Heine; Adrie H Westphal; Catleen Conrad; Philipp Rathsack; Willem J H van Berkel; Dirk Tischler
Journal:  AMB Express       Date:  2015-06-04       Impact factor: 3.298

4.  Functional characterization and stability improvement of a 'thermophilic-like' ene-reductase from Rhodococcus opacus 1CP.

Authors:  Anika Riedel; Marika Mehnert; Caroline E Paul; Adrie H Westphal; Willem J H van Berkel; Dirk Tischler
Journal:  Front Microbiol       Date:  2015-10-01       Impact factor: 5.640

5.  Catabolism of Alkylphenols in Rhodococcus via a Meta-Cleavage Pathway Associated With Genomic Islands.

Authors:  David J Levy-Booth; Morgan M Fetherolf; Gordon R Stewart; Jie Liu; Lindsay D Eltis; William W Mohn
Journal:  Front Microbiol       Date:  2019-08-20       Impact factor: 5.640

6.  Statistical Optimisation of Phenol Degradation and Pathway Identification through Whole Genome Sequencing of the Cold-Adapted Antarctic Bacterium, Rhodococcus sp. Strain AQ5-07.

Authors:  Gillian Li Yin Lee; Nur Nadhirah Zakaria; Peter Convey; Hiroyuki Futamata; Azham Zulkharnain; Kenshi Suzuki; Khalilah Abdul Khalil; Noor Azmi Shaharuddin; Siti Aisyah Alias; Gerardo González-Rocha; Siti Aqlima Ahmad
Journal:  Int J Mol Sci       Date:  2020-12-09       Impact factor: 5.923

7.  Comparative transcriptomics elucidates adaptive phenol tolerance and utilization in lipid-accumulating Rhodococcus opacus PD630.

Authors:  Aki Yoneda; William R Henson; Nicholas K Goldner; Kun Joo Park; Kevin J Forsberg; Soo Ji Kim; Mitchell W Pesesky; Marcus Foston; Gautam Dantas; Tae Seok Moon
Journal:  Nucleic Acids Res       Date:  2016-02-02       Impact factor: 16.971

Review 8.  Two-Component FAD-Dependent Monooxygenases: Current Knowledge and Biotechnological Opportunities.

Authors:  Thomas Heine; Willem J H van Berkel; George Gassner; Karl-Heinz van Pée; Dirk Tischler
Journal:  Biology (Basel)       Date:  2018-08-02

9.  Genome-based analysis for the identification of genes involved in o-xylene degradation in Rhodococcus opacus R7.

Authors:  Alessandra Di Canito; Jessica Zampolli; Alessandro Orro; Pasqualina D'Ursi; Luciano Milanesi; Guido Sello; Alexander Steinbüchel; Patrizia Di Gennaro
Journal:  BMC Genomics       Date:  2018-08-06       Impact factor: 3.969

10.  Two Homologous Enzymes of the GalU Family in Rhodococcus opacus 1CP-RoGalU1 and RoGalU2.

Authors:  Antje Kumpf; Anett Partzsch; André Pollender; Isabel Bento; Dirk Tischler
Journal:  Int J Mol Sci       Date:  2019-11-19       Impact factor: 5.923

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