Literature DB >> 25277746

A multiplexed droplet digital PCR assay performs better than qPCR on inhibition prone samples.

Ruth Hall Sedlak1, Jane Kuypers1, Keith R Jerome2.   

Abstract

We demonstrate the development of a multiplex droplet digital PCR assay for human cytomegalovirus (CMV), human adenovirus species F, and an internal plasmid control that may be useful for PCR inhibition-prone clinical samples. This assay performs better on inhibition-prone stool samples than a quantitative PCR assay for CMV and is the first published clinical virology droplet digital PCR assay to incorporate an internal control.
Copyright © 2014 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Digital PCR; Inhibition; Quantitative PCR; Stool

Mesh:

Year:  2014        PMID: 25277746     DOI: 10.1016/j.diagmicrobio.2014.09.004

Source DB:  PubMed          Journal:  Diagn Microbiol Infect Dis        ISSN: 0732-8893            Impact factor:   2.803


  25 in total

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Authors:  Jane Kuypers; Keith R Jerome
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2.  Comparative Performance of Reagents and Platforms for Quantitation of Cytomegalovirus DNA by Digital PCR.

Authors:  R T Hayden; Z Gu; S S Sam; Y Sun; L Tang; S Pounds; A M Caliendo
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Review 3.  The Future of Digital Polymerase Chain Reaction in Virology.

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5.  Wastewater surveillance of SARS-CoV-2 in dormitories as a part of comprehensive university campus COVID-19 monitoring.

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Review 6.  Analysis of single nucleic acid molecules in micro- and nano-fluidics.

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Journal:  Lab Chip       Date:  2016-03-07       Impact factor: 6.799

Review 7.  Progress and Challenges in the Prevention, Diagnosis, and Management of Cytomegalovirus Infection in Transplantation.

Authors:  Ajit P Limaye; Tara M Babu; Michael Boeckh
Journal:  Clin Microbiol Rev       Date:  2020-10-28       Impact factor: 26.132

8.  Quantitative Detection and Genotyping of Helicobacter pylori from Stool using Droplet Digital PCR Reveals Variation in Bacterial Loads that Correlates with cagA Virulence Gene Carriage.

Authors:  Sarah Talarico; Mahboobeh Safaeian; Paula Gonzalez; Allan Hildesheim; Rolando Herrero; Carolina Porras; Bernal Cortes; Ann Larson; Ferric C Fang; Nina R Salama
Journal:  Helicobacter       Date:  2015-12-15       Impact factor: 5.753

Review 9.  Helicobacter pylori infection and antibiotic resistance - from biology to clinical implications.

Authors:  Evariste Tshibangu-Kabamba; Yoshio Yamaoka
Journal:  Nat Rev Gastroenterol Hepatol       Date:  2021-05-17       Impact factor: 46.802

10.  Novel RT-ddPCR assays for measuring the levels of subgenomic and genomic SARS-CoV-2 transcripts.

Authors:  Sushama Telwatte; Holly Anne Martin; Ryan Marczak; Parinaz Fozouni; Albert Vallejo-Gracia; G Renuka Kumar; Victoria Murray; Sulggi Lee; Melanie Ott; Joseph K Wong; Steven A Yukl
Journal:  Methods       Date:  2021-04-18       Impact factor: 4.647

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