Literature DB >> 25276005

A trichodorus (triplonchida: trichodoridae) nematode from thrips (thysanoptera: panchaetothripinae).

L K Carta1, A M Skantar1.   

Abstract

A thrips insect Caliothrips sp. (Thysanoptera: Panchaetothripinae) from persimmon fruit (Ebenaceae: Diospyros sp.) from an unknown origin, possibly Asia, was intercepted in a passenger bag in November 2012 at the Peace Arch Border Crossing from Canada to Blaine, WA, by a USDA-APHIS-PPQ port inspector. Nematodes were attached to the abdomen of the female insect and sent to us in saline. Seven nematodes (five females, two males) were measured and these and others were processed for permanent slides. An adult female and a female juvenile were prepared for PCR. Morphologically these nematodes belonged to the Trichodorus sparsus group, and the 28S rDNA D2-D3 sequence showed greatest similarity to Trichodorus paragiennensis (94%) and T. giennensis (93%), with greatest morphological similarity to the latter species. Among other morphological differences, the innermost uterus width is wider than in related species. Trichodorus spp. are normally found in soil, so this is the first population seen in the atypical habitat of an insect. Morphological and molecular characteristics of Trichodorus sp. are presented, but a putative new species name is not currently advisable because of relatively poor condition of specimens. Ecological associations are also discussed.

Entities:  

Keywords:  ecology; large subunit ribosomal DNA; stubby root nematode; systematics; taxonomy; virus vector

Year:  2014        PMID: 25276005      PMCID: PMC4176414     

Source DB:  PubMed          Journal:  J Nematol        ISSN: 0022-300X            Impact factor:   1.402


  7 in total

1.  MUSCLE: multiple sequence alignment with high accuracy and high throughput.

Authors:  Robert C Edgar
Journal:  Nucleic Acids Res       Date:  2004-03-19       Impact factor: 16.971

2.  DNA sequences from formalin-fixed nematodes: integrating molecular and morphological approaches to taxonomy.

Authors:  W K Thomas; J T Vida; L M Frisse; M Mundo; J G Baldwin
Journal:  J Nematol       Date:  1997-09       Impact factor: 1.402

3.  MODELTEST: testing the model of DNA substitution.

Authors:  D Posada; K A Crandall
Journal:  Bioinformatics       Date:  1998       Impact factor: 6.937

4.  Simplicity-correlated size growth of the nuclear 28S ribosomal RNA D3 expansion segment in the crustacean order Isopoda.

Authors:  G B Nunn; B F Theisen; B Christensen; P Arctander
Journal:  J Mol Evol       Date:  1996-02       Impact factor: 2.395

Review 5.  Status and prospects of plant virus control through interference with vector transmission.

Authors:  C Bragard; P Caciagli; O Lemaire; J J Lopez-Moya; S MacFarlane; D Peters; P Susi; L Torrance
Journal:  Annu Rev Phytopathol       Date:  2013-05-06       Impact factor: 13.078

6.  CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.

Authors:  J D Thompson; D G Higgins; T J Gibson
Journal:  Nucleic Acids Res       Date:  1994-11-11       Impact factor: 16.971

7.  Molecular phylogenetics and the evolution of host plant associations in the nematode genus Fergusobia (Tylenchida: Fergusobiinae).

Authors:  Weimin Ye; Robin M Giblin-Davis; Kerrie A Davies; Matthew F Purcell; Sonja J Scheffer; Gary S Taylor; Ted D Center; Krystalynne Morris; W Kelley Thomas
Journal:  Mol Phylogenet Evol       Date:  2007-03-12       Impact factor: 4.286

  7 in total

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