Literature DB >> 25275812

Cancer biomarkers: the role of structured data reporting.

Ross W Simpson1, Michael A Berman, Philip R Foulis, Dimitrios X G Divaris, George G Birdsong, Jaleh Mirza, Richard Moldwin, Samantha Spencer, John R Srigley, Patrick L Fitzgibbons.   

Abstract

CONTEXT: The College of American Pathologists has been producing cancer protocols since 1986 to aid pathologists in the diagnosis and reporting of cancer cases. Many pathologists use the included cancer case summaries as templates for dictation/data entry into the final pathology report. These summaries are now available in a computer-readable format with structured data elements for interoperability, packaged as "electronic cancer checklists." Most major vendors of anatomic pathology reporting software support this model.
OBJECTIVES: To outline the development and advantages of structured electronic cancer reporting using the electronic cancer checklist model, and to describe its extension to cancer biomarkers and other aspects of cancer reporting. DATA SOURCES: Peer-reviewed literature and internal records of the College of American Pathologists.
CONCLUSIONS: Accurate and usable cancer biomarker data reporting will increasingly depend on initial capture of this information as structured data. This process will support the standardization of data elements and biomarker terminology, enabling the meaningful use of these datasets by pathologists, clinicians, tumor registries, and patients.

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Year:  2014        PMID: 25275812     DOI: 10.5858/arpa.2014-0082-RA

Source DB:  PubMed          Journal:  Arch Pathol Lab Med        ISSN: 0003-9985            Impact factor:   5.534


  11 in total

Review 1.  Does standardised structured reporting contribute to quality in diagnostic pathology? The importance of evidence-based datasets.

Authors:  D W Ellis; J Srigley
Journal:  Virchows Arch       Date:  2015-08-28       Impact factor: 4.064

2.  An Extended SNOMED CT Concept Model for Observations in Molecular Genetics.

Authors:  James R Campbell; Geoffrey Talmon; Allison Cushman-Vokoun; Daniel Karlsson; W Scott Campbell
Journal:  AMIA Annu Symp Proc       Date:  2017-02-10

3.  Underutilization of Guideline-Recommended Mismatch Repair/Microsatellite Instability Biomarker Testing in Advanced Colorectal Cancer.

Authors:  David J Papke; Neal I Lindeman; Deborah Schrag; J Bryan Iorgulescu
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2022-09-02       Impact factor: 4.090

4.  Molecular pathology testing for non-small cell lung cancer: an observational study of elements currently present in request forms and result reports and the opinion of different stakeholders.

Authors:  Kelly Dufraing; Kaat Van Casteren; Joke Breyne; Nicky D'Haene; Claude Van Campenhout; Sara Vander Borght; Karen Zwaenepoel; Etienne Rouleau; Ed Schuuring; Jan von der Thüsen; Elisabeth Dequeker
Journal:  BMC Cancer       Date:  2022-07-06       Impact factor: 4.638

5.  Implementing and Improving Automated Electronic Tumor Molecular Profiling.

Authors:  Matthew J Rioth; David B Staggs; Lauren Hackett; Erich Haberman; Mike Tod; Mia Levy; Jeremy Warner
Journal:  J Oncol Pract       Date:  2016-01-26       Impact factor: 3.840

6.  College of American Pathologists Cancer Protocols: From Optimizing Cancer Patient Care to Facilitating Interoperable Reporting and Downstream Data Use.

Authors:  Vanda F Torous; Ross W Simpson; Jyoti P Balani; Alexander S Baras; Michael A Berman; George G Birdsong; Giovanna A Giannico; Gladell P Paner; Jason R Pettus; Zack Sessions; S Joseph Sirintrapun; John R Srigley; Samantha Spencer
Journal:  JCO Clin Cancer Inform       Date:  2021-01

Review 7.  Synoptic Reporting: Evidence-Based Review and Future Directions.

Authors:  Andrew A Renshaw; Mercy Mena-Allauca; Edwin W Gould; S Joseph Sirintrapun
Journal:  JCO Clin Cancer Inform       Date:  2018-12

8.  Annual Report to the Nation on the Status of Cancer, Featuring Cancer in Men and Women Age 20-49 Years.

Authors:  Elizabeth M Ward; Recinda L Sherman; S Jane Henley; Ahmedin Jemal; David A Siegel; Eric J Feuer; Albert U Firth; Betsy A Kohler; Susan Scott; Jiemin Ma; Robert N Anderson; Vicki Benard; Kathleen A Cronin
Journal:  J Natl Cancer Inst       Date:  2019-12-01       Impact factor: 13.506

9.  Performance of a Web-based Method for Generating Synoptic Reports.

Authors:  Megan A Renshaw; Scott A Renshaw; Mercy Mena-Allauca; Patricia P Carrion; Xiaorong Mei; Arniris Narciandi; Edwin W Gould; Andrew A Renshaw
Journal:  J Pathol Inform       Date:  2017-03-10

10.  Fit-For-Purpose PD-L1 Biomarker Testing For Patient Selection in Immuno-Oncology: Guidelines For Clinical Laboratories From the Canadian Association of Pathologists-Association Canadienne Des Pathologistes (CAP-ACP).

Authors:  Carol C Cheung; Penny Barnes; Gilbert Bigras; Scott Boerner; Jagdish Butany; Fiorella Calabrese; Christian Couture; Jean Deschenes; Hala El-Zimaity; Gabor Fischer; Pierre O Fiset; John Garratt; Laurette Geldenhuys; C Blake Gilks; Marius Ilie; Diana Ionescu; Hyun J Lim; Lisa Manning; Adnan Mansoor; Robert Riddell; Catherine Ross; Sinchita Roy-Chowdhuri; Alan Spatz; Paul E Swanson; Victor A Tron; Ming-Sound Tsao; Hangjun Wang; Zhaolin Xu; Emina E Torlakovic
Journal:  Appl Immunohistochem Mol Morphol       Date:  2019 Nov/Dec
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