Literature DB >> 25265190

Screening and identification of DNA aptamers against T-2 toxin assisted by graphene oxide.

Xiujuan Chen1, Yukun Huang, Nuo Duan, Shijia Wu, Yu Xia, Xiaoyuan Ma, Changqing Zhu, Yuan Jiang, Zhouping Wang.   

Abstract

A high-affinity ssDNA aptamer that specifically binds to T-2 toxin was generated by the systemic evolution of ligands by exponential enrichment (SELEX) procedure assisted by graphene oxide (GO). After 10 rounds of selection against T-2 toxin, a highly enriched ssDNA pool was sequenced and the representative aptamers were subjected to binding assays to evaluate their affinity and specificity. Circular dichroism spectroscopy was also used to study the inherent interaction of T-2 toxin and the preferred aptamer Seq.16, which demonstrated a low dissociation constant (Kd) of 20.8 ± 3.1 nM and excellent selectivity for T-2 toxin. Using the selected aptamer Seq.16 as the recognition element, an aptamer-based fluorescent bioassay was developed for the measurement of T-2 in beer samples with a linear range from 0.5 to 37.5 μM (R(2) = 0.988) and a limit of detection (LOD) of 0.4 μM. The results indicate that GO-SELEX technology is appropriate for the screening of aptamers against small-molecule toxins, offering a promising application for aptamer-based biosensors.

Entities:  

Keywords:  SELEX; T-2 toxin; aptamer; graphene oxide (GO); mycotoxin

Mesh:

Substances:

Year:  2014        PMID: 25265190     DOI: 10.1021/jf5032058

Source DB:  PubMed          Journal:  J Agric Food Chem        ISSN: 0021-8561            Impact factor:   5.279


  19 in total

1.  A "turnon" aptasensor for simultaneous and time-resolved fluorometric determination of zearalenone, trichothecenes A and aflatoxin B1 using WS2 as a quencher.

Authors:  Sobia Niazi; Imran Mahmood Khan; Ye Yu; Imran Pasha; Muhammad Shoaib; Ali Mohsin; Bilal Sajid Mushtaq; Wasim Akhtar; Zhouping Wang
Journal:  Mikrochim Acta       Date:  2019-07-24       Impact factor: 5.833

Review 2.  Advances and Challenges in Small-Molecule DNA Aptamer Isolation, Characterization, and Sensor Development.

Authors:  Haixiang Yu; Obtin Alkhamis; Juan Canoura; Yingzhu Liu; Yi Xiao
Journal:  Angew Chem Int Ed Engl       Date:  2021-02-09       Impact factor: 15.336

Review 3.  Development of hydrogels for regenerative engineering.

Authors:  Xiaofei Guan; Meltem Avci-Adali; Emine Alarçin; Hao Cheng; Sara Saheb Kashaf; Yuxiao Li; Aditya Chawla; Hae Lin Jang; Ali Khademhosseini
Journal:  Biotechnol J       Date:  2017-02-21       Impact factor: 4.677

4.  A switchable and signal-amplified aptasensor based on metal organic frameworks as the quencher for turn-on detection of T-2 mycotoxin.

Authors:  Xinliu Tan; Weidao Yu; Yuwen Wang; Ping Song; Qing Xu; Dengming Ming; Yaqiong Yang
Journal:  Anal Bioanal Chem       Date:  2021-08-24       Impact factor: 4.142

Review 5.  Single-Stranded DNA Aptamers against Pathogens and Toxins: Identification and Biosensing Applications.

Authors:  Ka Lok Hong; Letha J Sooter
Journal:  Biomed Res Int       Date:  2015-06-23       Impact factor: 3.411

Review 6.  Small-Molecule Binding Aptamers: Selection Strategies, Characterization, and Applications.

Authors:  Annamaria Ruscito; Maria C DeRosa
Journal:  Front Chem       Date:  2016-05-10       Impact factor: 5.221

7.  Graphene oxide-assisted non-immobilized SELEX of okdaic acid aptamer and the analytical application of aptasensor.

Authors:  Huajie Gu; Nuo Duan; Shijia Wu; Liling Hao; Yu Xia; Xiaoyuan Ma; Zhouping Wang
Journal:  Sci Rep       Date:  2016-02-22       Impact factor: 4.379

8.  Immuno Affinity SELEX for Simple, Rapid, and Cost-Effective Aptamer Enrichment and Identification against Aflatoxin B1.

Authors:  Keerthana Setlem; Bhairab Mondal; Shylaja Ramlal; Joseph Kingston
Journal:  Front Microbiol       Date:  2016-12-01       Impact factor: 5.640

Review 9.  Selection and Biosensor Application of Aptamers for Small Molecules.

Authors:  Franziska Pfeiffer; Günter Mayer
Journal:  Front Chem       Date:  2016-06-15       Impact factor: 5.221

10.  Development of Hybrid IgG-Aptamer Sandwich Immunoassay Platform for Aflatoxin B1 Detection and Its Evaluation Onto Various Field Samples.

Authors:  Y V V Aswani Kumar; R M Renuka; Jayakrishnan Achuth; M Venkataramana; M Ushakiranmayi; P Sudhakar
Journal:  Front Pharmacol       Date:  2018-03-27       Impact factor: 5.810

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