Literature DB >> 25264806

Pyrosequencing assessment of rhizosphere fungal communities from a soybean field.

Akifumi Sugiyama1, Yoshikatsu Ueda, Hisabumi Takase, Kazufumi Yazaki.   

Abstract

Soil fungal communities play essential roles in soil ecosystems, affecting plant growth and health. Rhizosphere bacterial communities have been shown to undergo dynamic changes during plant growth. This study utilized 454 pyrosequencing to analyze rhizosphere fungal communities during soybean growth. Members of the Ascomycota and Basiodiomycota dominated in all soils. There were no statistically significant changes at the phylum level among growth stages or between bulk and rhizosphere soils. In contrast, the relative abundance of small numbers of operational taxonomic units, 4 during growth and 28 between bulk and rhizosphere soils, differed significantly. Clustering analysis revealed that rhizosphere fungal communities were different from bulk fungal communities during growth stages of soybeans. Taken together, these results suggest that in contrast to rhizosphere bacterial communities, most constituents of rhizosphere fungal communities remained stable during soybean growth.

Entities:  

Keywords:  communauté fongique; fungal community; pyrosequencing; pyroséquençage; rhizosphere; rhizosphère; soja; soybean

Mesh:

Substances:

Year:  2014        PMID: 25264806     DOI: 10.1139/cjm-2014-0443

Source DB:  PubMed          Journal:  Can J Microbiol        ISSN: 0008-4166            Impact factor:   2.419


  6 in total

1.  Grape Cultivar Features Differentiate the Grape Rhizosphere Microbiota.

Authors:  Lijun Bao; Bo Sun; Yingxue Wei; Nan Xu; Shiwei Zhang; Likun Gu; Zhihui Bai
Journal:  Plants (Basel)       Date:  2022-04-20

Review 2.  Impact of plant domestication on rhizosphere microbiome assembly and functions.

Authors:  Juan E Pérez-Jaramillo; Rodrigo Mendes; Jos M Raaijmakers
Journal:  Plant Mol Biol       Date:  2015-06-18       Impact factor: 4.076

3.  Rhizospheric fungi of Panax notoginseng: diversity and antagonism to host phytopathogens.

Authors:  Cui-Ping Miao; Qi-Li Mi; Xin-Guo Qiao; You-Kun Zheng; You-Wei Chen; Li-Hua Xu; Hui-Lin Guan; Li-Xing Zhao
Journal:  J Ginseng Res       Date:  2015-06-19       Impact factor: 6.060

4.  Mycobiota of maize seeds revealed by rDNA-ITS sequence analysis of samples with varying storage times.

Authors:  Hui-Qin Xing; Jian-Cang Ma; Bing-Liang Xu; Shu-Wu Zhang; Jin Wang; Li Cao; Xue-Mei Yang
Journal:  Microbiologyopen       Date:  2018-03-23       Impact factor: 3.139

5.  Gene mutation associated with esl mediates shifts on fungal community composition in rhizosphere soil of rice at grain-filling stage.

Authors:  Puleng Letuma; Yasir Arafat; Muhammad Waqas; Feifan Lin; Weiwei Lin; Yiyang Zhang; Mamello Masita; Kai Fan; Zhaowei Li; Wenxiong Lin
Journal:  Sci Rep       Date:  2018-11-30       Impact factor: 4.379

6.  Differed Growth Stage Dynamics of Root-Associated Bacterial and Fungal Community Structure Associated with Halophytic Plant Lycium ruthenicum.

Authors:  Yan Li; Xuemin He; Hongfei Yuan; Guanghui Lv
Journal:  Microorganisms       Date:  2022-08-15
  6 in total

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