Literature DB >> 25261847

Mono-allelic VSG expression by RNA polymerase I in Trypanosoma brucei: expression site control from both ends?

Arthur Günzl1, Justin K Kirkham2, Tu N Nguyen2, Nitika Badjatia2, Sung Hee Park2.   

Abstract

Trypanosoma brucei is a vector borne, lethal protistan parasite of humans and livestock in sub-Saharan Africa. Antigenic variation of its cell surface coat enables the parasite to evade adaptive immune responses and to live freely in the blood of its mammalian hosts. The coat consists of ten million copies of variant surface glycoprotein (VSG) that is expressed from a single VSG gene, drawn from a large repertoire and located near the telomere at one of fifteen so-called bloodstream expression sites (BESs). Thus, antigenic variation is achieved by switching to the expression of a different VSG gene. A BES is a tandem array of expression site-associated genes and a terminal VSG gene. It is polycistronically transcribed by a multifunctional RNA polymerase I (RNAPI) from a short promoter that is located 45-60 kb upstream of the VSG gene. The mechanism(s) restricting VSG expression to a single BES are not well understood. There is convincing evidence that epigenetic silencing and transcription attenuation play important roles. Furthermore, recent data indicated that there is regulation at the level of transcription initiation and that, surprisingly, the VSG mRNA appears to have a role in restricting VSG expression to a single gene. Here, we review BES expression regulation and propose a model in which telomere-directed, epigenetic BES silencing is opposed by BES promoter-directed, activated RNAPI transcription.
Copyright © 2014 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Mono-allelic gene expression; RNA polymerase I; Telomeric silencing; Trypanosome

Mesh:

Substances:

Year:  2014        PMID: 25261847      PMCID: PMC4272636          DOI: 10.1016/j.gene.2014.09.047

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  66 in total

1.  Transcription is initiated on silent variant surface glycoprotein expression sites despite monoallelic expression in Trypanosoma brucei.

Authors:  Ali Kassem; Etienne Pays; Luc Vanhamme
Journal:  Proc Natl Acad Sci U S A       Date:  2014-06-02       Impact factor: 11.205

2.  Differential RNA elongation controls the variant surface glycoprotein gene expression sites of Trypanosoma brucei.

Authors:  L Vanhamme; P Poelvoorde; A Pays; P Tebabi; H Van Xong; E Pays
Journal:  Mol Microbiol       Date:  2000-04       Impact factor: 3.501

3.  Capturing the variant surface glycoprotein repertoire (the VSGnome) of Trypanosoma brucei Lister 427.

Authors:  George A M Cross; Hee-Sook Kim; Bill Wickstead
Journal:  Mol Biochem Parasitol       Date:  2014-06-30       Impact factor: 1.759

Review 4.  Stochastic gene expression in mammals: lessons from olfaction.

Authors:  Angeliki Magklara; Stavros Lomvardas
Journal:  Trends Cell Biol       Date:  2013-05-18       Impact factor: 20.808

5.  Promoter occupancy of the basal class I transcription factor A differs strongly between active and silent VSG expression sites in Trypanosoma brucei.

Authors:  Tu N Nguyen; Laura S M Müller; Sung Hee Park; T Nicolai Siegel; Arthur Günzl
Journal:  Nucleic Acids Res       Date:  2013-12-17       Impact factor: 16.971

6.  Expression site attenuation mechanistically links antigenic variation and development in Trypanosoma brucei.

Authors:  Christopher Batram; Nicola G Jones; Christian J Janzen; Sebastian M Markert; Markus Engstler
Journal:  Elife       Date:  2014-05-20       Impact factor: 8.140

Review 7.  Antigenic variation in African trypanosomes.

Authors:  David Horn
Journal:  Mol Biochem Parasitol       Date:  2014-05-22       Impact factor: 1.759

Review 8.  Silence, activate, poise and switch! Mechanisms of antigenic variation in Plasmodium falciparum.

Authors:  Julien Guizetti; Artur Scherf
Journal:  Cell Microbiol       Date:  2013-02-21       Impact factor: 3.715

Review 9.  Antigenic variation in African trypanosomes: the importance of chromosomal and nuclear context in VSG expression control.

Authors:  Lucy Glover; Sebastian Hutchinson; Sam Alsford; Richard McCulloch; Mark C Field; David Horn
Journal:  Cell Microbiol       Date:  2013-10-10       Impact factor: 3.715

10.  Trypanosoma brucei histone H1 inhibits RNA polymerase I transcription and is important for parasite fitness in vivo.

Authors:  Ana C Pena; Mafalda R Pimentel; Helena Manso; Rita Vaz-Drago; Daniel Pinto-Neves; Francisco Aresta-Branco; Filipa Rijo-Ferreira; Fabien Guegan; Luis Pedro Coelho; Maria Carmo-Fonseca; Nuno L Barbosa-Morais; Luisa M Figueiredo
Journal:  Mol Microbiol       Date:  2014-07-14       Impact factor: 3.501

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  23 in total

1.  Trypanosoma brucei EIF4E2 cap-binding protein binds a homolog of the histone-mRNA stem-loop-binding protein.

Authors:  Eden R Freire; Danielle M N Moura; Maria J R Bezerra; Camila C Xavier; Mariana C Morais-Sobral; Ajay A Vashisht; Antonio M Rezende; James A Wohlschlegel; Nancy R Sturm; Osvaldo P de Melo Neto; David A Campbell
Journal:  Curr Genet       Date:  2017-12-29       Impact factor: 3.886

Review 2.  Telomere and Subtelomere R-loops and Antigenic Variation in Trypanosomes.

Authors:  Arpita Saha; Vishal P Nanavaty; Bibo Li
Journal:  J Mol Biol       Date:  2019-11-02       Impact factor: 5.469

Review 3.  DNA double-strand breaks and telomeres play important roles in trypanosoma brucei antigenic variation.

Authors:  Bibo Li
Journal:  Eukaryot Cell       Date:  2015-01-09

4.  Dynein Light Chain LC8 Is Required for RNA Polymerase I-Mediated Transcription in Trypanosoma brucei, Facilitating Assembly and Promoter Binding of Class I Transcription Factor A.

Authors:  Justin K Kirkham; Sung Hee Park; Tu N Nguyen; Ju Huck Lee; Arthur Günzl
Journal:  Mol Cell Biol       Date:  2015-10-12       Impact factor: 4.272

5.  Identification of the ISWI Chromatin Remodeling Complex of the Early Branching Eukaryote Trypanosoma brucei.

Authors:  Tara M Stanne; Mani Shankar Narayanan; Sophie Ridewood; Alexandra Ling; Kathrin Witmer; Manish Kushwaha; Simone Wiesler; Bill Wickstead; Jennifer Wood; Gloria Rudenko
Journal:  J Biol Chem       Date:  2015-09-15       Impact factor: 5.157

Review 6.  Epigenetic Regulation of Transcription in Trypanosomatid Protozoa.

Authors:  Santiago Martínez-Calvillo; Gabriela Romero-Meza; Juan C Vizuet-de-Rueda; Luis E Florencio-Martínez; Rebeca Manning-Cela; Tomás Nepomuceno-Mejía
Journal:  Curr Genomics       Date:  2018-02       Impact factor: 2.236

Review 7.  Does DNA replication direct locus-specific recombination during host immune evasion by antigenic variation in the African trypanosome?

Authors:  Rebecca Devlin; Catarina A Marques; Richard McCulloch
Journal:  Curr Genet       Date:  2016-11-07       Impact factor: 3.886

8.  Trypanosoma brucei RAP1 maintains telomere and subtelomere integrity by suppressing TERRA and telomeric RNA:DNA hybrids.

Authors:  Vishal Nanavaty; Ranjodh Sandhu; Sanaa E Jehi; Unnati M Pandya; Bibo Li
Journal:  Nucleic Acids Res       Date:  2017-06-02       Impact factor: 16.971

9.  Selective inhibition of RNA polymerase I transcription as a potential approach to treat African trypanosomiasis.

Authors:  Louise E Kerry; Elaine E Pegg; Donald P Cameron; James Budzak; Gretchen Poortinga; Katherine M Hannan; Ross D Hannan; Gloria Rudenko
Journal:  PLoS Negl Trop Dis       Date:  2017-03-06

10.  A transcription-independent epigenetic mechanism is associated with antigenic switching in Trypanosoma brucei.

Authors:  Francisco Aresta-Branco; Silvia Pimenta; Luisa M Figueiredo
Journal:  Nucleic Acids Res       Date:  2015-12-15       Impact factor: 16.971

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