Literature DB >> 25256009

An automated image processing method to quantify collagen fibre organization within cutaneous scar tissue.

Kyle P Quinn1, Alexander Golberg, G Felix Broelsch, Saiqa Khan, Martin Villiger, Brett Bouma, William G Austen, Robert L Sheridan, Martin C Mihm, Martin L Yarmush, Irene Georgakoudi.   

Abstract

Standard approaches to evaluate scar formation within histological sections rely on qualitative evaluations and scoring, which limits our understanding of the remodelling process. We have recently developed an image analysis technique for the rapid quantification of fibre alignment at each pixel location. The goal of this study was to evaluate its application for quantitatively mapping scar formation in histological sections of cutaneous burns. To this end, we utilized directional statistics to define maps of fibre density and directional variance from Masson's trichrome-stained sections for quantifying changes in collagen organization during scar remodelling. Significant increases in collagen fibre density are detectable soon after burn injury in a rat model. Decreased fibre directional variance in the scar was also detectable between 3 weeks and 6 months after injury, indicating increasing fibre alignment. This automated analysis of fibre organization can provide objective surrogate endpoints for evaluating cutaneous wound repair and regeneration.
© 2014 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

Entities:  

Keywords:  burns; collagen; fibre alignment; image analysis; scar remodelling

Mesh:

Substances:

Year:  2014        PMID: 25256009      PMCID: PMC4289465          DOI: 10.1111/exd.12553

Source DB:  PubMed          Journal:  Exp Dermatol        ISSN: 0906-6705            Impact factor:   3.960


  9 in total

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Authors:  E A Sander; V H Barocas
Journal:  J Biomed Mater Res A       Date:  2009-02       Impact factor: 4.396

Review 2.  Measuring fiber alignment in electrospun scaffolds: a user's guide to the 2D fast Fourier transform approach.

Authors:  Chantal E Ayres; B Shekhar Jha; Hannah Meredith; James R Bowman; Gary L Bowlin; Scott C Henderson; David G Simpson
Journal:  J Biomater Sci Polym Ed       Date:  2008       Impact factor: 3.517

3.  Rapid quantification of pixel-wise fiber orientation data in micrographs.

Authors:  Kyle P Quinn; Irene Georgakoudi
Journal:  J Biomed Opt       Date:  2013-04       Impact factor: 3.170

4.  Collagen gels and the 'Bornstein legacy': from a substrate for tissue culture to cell culture systems and biomaterials for tissue regeneration.

Authors:  Elena García-Gareta
Journal:  Exp Dermatol       Date:  2014-07       Impact factor: 3.960

5.  Histologic basis of keloid and hypertrophic scar differentiation. Clinicopathologic correlation.

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6.  Myofibroblasts and hyalinized collagen as markers of skin disease in systemic sclerosis.

Authors:  Eugene Y Kissin; Peter A Merkel; Robert Lafyatis
Journal:  Arthritis Rheum       Date:  2006-11

7.  Non-thermal, pulsed electric field cell ablation: A novel tool for regenerative medicine and scarless skin regeneration.

Authors:  Alexander Golberg; G Felix Broelsch; Stefan Bohr; Martin C Mihm; William G Austen; Hassan Albadawi; Michael T Watkins; Martin L Yarmush
Journal:  Technology (Singap World Sci)       Date:  2013-09

8.  SPARC-null mice display abnormalities in the dermis characterized by decreased collagen fibril diameter and reduced tensile strength.

Authors:  Amy D Bradshaw; Pauli Puolakkainen; Jayasri Dasgupta; Jeffrey M Davidson; Thomas N Wight; E Helene Sage
Journal:  J Invest Dermatol       Date:  2003-06       Impact factor: 8.551

9.  The lack of thrombospondin-1 (TSP1) dictates the course of wound healing in double-TSP1/TSP2-null mice.

Authors:  Azin Agah; Themis R Kyriakides; Jack Lawler; Paul Bornstein
Journal:  Am J Pathol       Date:  2002-09       Impact factor: 4.307

  9 in total
  22 in total

1.  Preventing Scars after Injury with Partial Irreversible Electroporation.

Authors:  Alexander Golberg; Martin Villiger; Saiqa Khan; Kyle P Quinn; William C Y Lo; Brett E Bouma; Martin C Mihm; William G Austen; Martin L Yarmush
Journal:  J Invest Dermatol       Date:  2016-07-05       Impact factor: 8.551

2.  Rapid three-dimensional quantification of voxel-wise collagen fiber orientation.

Authors:  Zhiyi Liu; Kyle P Quinn; Lucia Speroni; Lisa Arendt; Charlotte Kuperwasser; Carlos Sonnenschein; Ana M Soto; Irene Georgakoudi
Journal:  Biomed Opt Express       Date:  2015-06-03       Impact factor: 3.732

3.  Skin regeneration with all accessory organs following ablation with irreversible electroporation.

Authors:  Alexander Golberg; Martin Villiger; G Felix Broelsch; Kyle P Quinn; Hassan Albadawi; Saiqa Khan; Michael T Watkins; Irene Georgakoudi; William G Austen; Marianna Bei; Brett E Bouma; Martin C Mihm; Martin L Yarmush
Journal:  J Tissue Eng Regen Med       Date:  2017-05-23       Impact factor: 3.963

4.  Tissue Imaging and Quantification Relying on Endogenous Contrast.

Authors:  Zhiyi Liu; Jia Meng; Kyle P Quinn; Irene Georgakoudi
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

5.  3D organizational mapping of collagen fibers elucidates matrix remodeling in a hormone-sensitive 3D breast tissue model.

Authors:  Zhiyi Liu; Lucia Speroni; Kyle P Quinn; Carlo Alonzo; Dimitra Pouli; Yang Zhang; Emily Stuntz; Carlos Sonnenschein; Ana M Soto; Irene Georgakoudi
Journal:  Biomaterials       Date:  2018-06-26       Impact factor: 12.479

6.  Characterizing differences in the collagen fiber organization of skin wounds using quantitative polarized light imaging.

Authors:  Alan E Woessner; James D McGee; Jake D Jones; Kyle P Quinn
Journal:  Wound Repair Regen       Date:  2019-09-03       Impact factor: 3.617

7.  Automated quantification of three-dimensional organization of fiber-like structures in biological tissues.

Authors:  Zhiyi Liu; Dimitra Pouli; Disha Sood; Aswin Sundarakrishnan; Carrie K Hui Mingalone; Lisa M Arendt; Carlo Alonzo; Kyle P Quinn; Charlotte Kuperwasser; Li Zeng; Thomas Schnelldorfer; David L Kaplan; Irene Georgakoudi
Journal:  Biomaterials       Date:  2016-11-25       Impact factor: 12.479

8.  Substrate modulus of 3D-printed scaffolds regulates the regenerative response in subcutaneous implants through the macrophage phenotype and Wnt signaling.

Authors:  R Guo; A R Merkel; J A Sterling; J M Davidson; S A Guelcher
Journal:  Biomaterials       Date:  2015-09-11       Impact factor: 12.479

9.  The subtypes of microscopic colitis from a pathologist's perspective: past, present and future.

Authors:  Peter Johan Heiberg Engel; Anne-Marie Kanstrup Fiehn; Lars Kristian Munck; Martin Kristensson
Journal:  Ann Transl Med       Date:  2018-02

10.  Quantitative differentiation of normal and scarred tissues using second-harmonic generation microscopy.

Authors:  Murat Yildirim; Kyle P Quinn; James B Kobler; Steven M Zeitels; Irene Georgakoudi; Adela Ben-Yakar
Journal:  Scanning       Date:  2016-04-25       Impact factor: 1.932

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