Literature DB >> 18286605

Comparison of 2D fiber network orientation measurement methods.

E A Sander1, V H Barocas.   

Abstract

The mechanical properties of tissues, tissue analogs, and biomaterials are dependent on their underlying microstructure. As such, many mechanical models incorporate some aspect of microstructure, but a robust protocol for characterizing fiber architecture remains a challenge. A number of image-based methods, including mean intercept length (MIL), line fraction deviation (LFD), and Fourier transform methods (FTM), have been applied to microstructural images to describe material heterogeneity and orientation, but a performance comparison, particularly for fiber networks, has not been conducted. In this study, we constructed 40 two-dimensional test images composed of simulated fiber networks varying in fiber number, orientation, and anisotropy index. We assessed the accuracy of each method in measuring principal direction (theta) and anisotropy index (alpha). FTM proved to be the superior method because it was more reliable in measurement accuracy (Deltatheta = 2.95 degrees +/- 6.72 degrees , Deltaalpha = 0.03 +/- 0.02), faster in execution time, and flexible in its application. MIL (Deltatheta = 6.23 degrees +/- 10.68 degrees , Deltaalpha = 0.08 +/- 0.06) was not significantly less accurate than FTM but was much slower. LFD (Deltatheta = 9.97 degrees +/- 11.82 degrees , Deltaalpha = 0.24 +/- 0.13) consistently underperformed. FTM results agreed qualitatively with fibrin gel SEM micrographs, suggesting that FTM can be used to obtain image-based statistical measurements of microstructure.

Mesh:

Year:  2009        PMID: 18286605     DOI: 10.1002/jbm.a.31847

Source DB:  PubMed          Journal:  J Biomed Mater Res A        ISSN: 1549-3296            Impact factor:   4.396


  56 in total

1.  Collagen network strengthening following cyclic tensile loading.

Authors:  Monica E Susilo; Jeffrey A Paten; Edward A Sander; Thao D Nguyen; Jeffrey W Ruberti
Journal:  Interface Focus       Date:  2016-02-06       Impact factor: 3.906

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Authors:  Amy M Hopkins; Brandon Wheeler; Cristian Staii; David L Kaplan; Timothy J Atherton
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3.  Multiscale mechanical simulations of cell compacted collagen gels.

Authors:  Maziar Aghvami; V H Barocas; E A Sander
Journal:  J Biomech Eng       Date:  2013-07-01       Impact factor: 2.097

4.  Complex matrix remodeling and durotaxis can emerge from simple rules for cell-matrix interaction in agent-based models.

Authors:  James W Reinhardt; Daniel A Krakauer; Keith J Gooch
Journal:  J Biomech Eng       Date:  2013-07-01       Impact factor: 2.097

5.  Quantification of collagen fiber structure using second harmonic generation imaging and two-dimensional discrete Fourier transform analysis: Application to the human optic nerve head.

Authors:  Jacek K Pijanka; Petar P Markov; Dan Midgett; Neil G Paterson; Nick White; Emma J Blain; Thao D Nguyen; Harry A Quigley; Craig Boote
Journal:  J Biophotonics       Date:  2019-01-10       Impact factor: 3.207

6.  Quantitative Label-Free Imaging of 3D Vascular Networks Self-Assembled in Synthetic Hydrogels.

Authors:  Gaurav Kaushik; Daniel A Gil; Elizabeth Torr; Elizabeth S Berge; Cheryl Soref; Peyton Uhl; Gianluca Fontana; Jessica Antosiewicz-Bourget; Collin Edington; Michael P Schwartz; Linda G Griffith; James A Thomson; Melissa C Skala; William T Daly; William L Murphy
Journal:  Adv Healthc Mater       Date:  2018-12-19       Impact factor: 9.933

7.  Automated segmentation of the lamina cribrosa using Frangi's filter: a novel approach for rapid identification of tissue volume fraction and beam orientation in a trabeculated structure in the eye.

Authors:  Ian C Campbell; Baptiste Coudrillier; Johanne Mensah; Richard L Abel; C Ross Ethier
Journal:  J R Soc Interface       Date:  2015-03-06       Impact factor: 4.118

8.  Rapid three-dimensional quantification of voxel-wise collagen fiber orientation.

Authors:  Zhiyi Liu; Kyle P Quinn; Lucia Speroni; Lisa Arendt; Charlotte Kuperwasser; Carlos Sonnenschein; Ana M Soto; Irene Georgakoudi
Journal:  Biomed Opt Express       Date:  2015-06-03       Impact factor: 3.732

9.  Collagen organization regulates stretch-initiated pain-related neuronal signals in vitro: Implications for structure-function relationships in innervated ligaments.

Authors:  Sijia Zhang; Sagar Singh; Beth A Winkelstein
Journal:  J Orthop Res       Date:  2017-08-11       Impact factor: 3.494

10.  Microscale fiber network alignment affects macroscale failure behavior in simulated collagen tissue analogs.

Authors:  Mohammad F Hadi; Victor H Barocas
Journal:  J Biomech Eng       Date:  2013-02       Impact factor: 2.097

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