Literature DB >> 25255805

Global profiling of co- and post-translationally N-myristoylated proteomes in human cells.

Emmanuelle Thinon1, Remigiusz A Serwa2, Malgorzata Broncel2, James A Brannigan3, Ute Brassat1, Megan H Wright4, William P Heal2, Anthony J Wilkinson3, David J Mann5, Edward W Tate4.   

Abstract

Protein N-myristoylation is a ubiquitous co- and post-translational modification that has been implicated in the development and progression of a range of human diseases. Here, we report the global N-myristoylated proteome in human cells determined using quantitative chemical proteomics combined with potent and specific human N-myristoyltransferase (NMT) inhibition. Global quantification of N-myristoylation during normal growth or apoptosis allowed the identification of >100 N-myristoylated proteins, >95% of which are identified for the first time at endogenous levels. Furthermore, quantitative dose response for inhibition of N-myristoylation is determined for >70 substrates simultaneously across the proteome. Small-molecule inhibition through a conserved substrate-binding pocket is also demonstrated by solving the crystal structures of inhibitor-bound NMT1 and NMT2. The presented data substantially expand the known repertoire of co- and post-translational N-myristoylation in addition to validating tools for the pharmacological inhibition of NMT in living cells.

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Year:  2014        PMID: 25255805      PMCID: PMC4200515          DOI: 10.1038/ncomms5919

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  65 in total

Review 1.  Myristoylation of viral and bacterial proteins.

Authors:  Sebastian Maurer-Stroh; Frank Eisenhaber
Journal:  Trends Microbiol       Date:  2004-04       Impact factor: 17.079

2.  Selective identification of newly synthesized proteins in mammalian cells using bioorthogonal noncanonical amino acid tagging (BONCAT).

Authors:  Daniela C Dieterich; A James Link; Johannes Graumann; David A Tirrell; Erin M Schuman
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-12       Impact factor: 11.205

3.  Mass spectrometric characterization of the affinity-purified human 26S proteasome complex.

Authors:  Xiaorong Wang; Chi-Fen Chen; Peter R Baker; Phang-lang Chen; Peter Kaiser; Lan Huang
Journal:  Biochemistry       Date:  2007-02-27       Impact factor: 3.162

4.  MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification.

Authors:  Jürgen Cox; Matthias Mann
Journal:  Nat Biotechnol       Date:  2008-11-30       Impact factor: 54.908

5.  Bioorthogonal chemical reporters for analyzing protein lipidation and lipid trafficking.

Authors:  Howard C Hang; John P Wilson; Guillaume Charron
Journal:  Acc Chem Res       Date:  2011-06-15       Impact factor: 22.384

6.  n-Tetradecanoyl is the NH2-terminal blocking group of the catalytic subunit of cyclic AMP-dependent protein kinase from bovine cardiac muscle.

Authors:  S A Carr; K Biemann; S Shoji; D C Parmelee; K Titani
Journal:  Proc Natl Acad Sci U S A       Date:  1982-10       Impact factor: 11.205

7.  N-myristoyltransferase 1 is essential in early mouse development.

Authors:  Shao H Yang; Anuraag Shrivastav; Cynthia Kosinski; Rajendra K Sharma; Miao-Hsueh Chen; Luc G Berthiaume; Luanne L Peters; Pao-Tien Chuang; Stephen G Young; Martin O Bergo
Journal:  J Biol Chem       Date:  2005-03-07       Impact factor: 5.157

8.  N-myristoyltransferase inhibitors as new leads to treat sleeping sickness.

Authors:  Julie A Frearson; Stephen Brand; Stuart P McElroy; Laura A T Cleghorn; Ondrej Smid; Laste Stojanovski; Helen P Price; M Lucia S Guther; Leah S Torrie; David A Robinson; Irene Hallyburton; Chidochangu P Mpamhanga; James A Brannigan; Anthony J Wilkinson; Michael Hodgkinson; Raymond Hui; Wei Qiu; Olawale G Raimi; Daan M F van Aalten; Ruth Brenk; Ian H Gilbert; Kevin D Read; Alan H Fairlamb; Michael A J Ferguson; Deborah F Smith; Paul G Wyatt
Journal:  Nature       Date:  2010-04-01       Impact factor: 49.962

9.  Replacement of the C6ORF66 assembly factor (NDUFAF4) restores complex I activity in patient cells.

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Journal:  Mol Med       Date:  2013-07-24       Impact factor: 6.354

10.  A fluorescence-based assay for N-myristoyltransferase activity.

Authors:  Victor Goncalves; James A Brannigan; Emmanuelle Thinon; Tayo O Olaleye; Remigiusz Serwa; Salvatore Lanzarone; Anthony J Wilkinson; Edward W Tate; Robin J Leatherbarrow
Journal:  Anal Biochem       Date:  2011-10-14       Impact factor: 3.365

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  95 in total

1.  Bioorthogonal Chemical Reporters for Monitoring Unsaturated Fatty-Acylated Proteins.

Authors:  Emmanuelle Thinon; Avital Percher; Howard C Hang
Journal:  Chembiochem       Date:  2016-07-29       Impact factor: 3.164

2.  Myristoylation of LMCD1 Leads to Its Species-Specific Derepression of E2F1 and NFATc1 in the Modulation of CDC6 and IL-33 Expression During Development of Vascular Lesions.

Authors:  Suresh Govatati; Prahalathan Pichavaram; Jagadeesh Janjanam; Liang Guo; Renu Virmani; Gadiparthi N Rao
Journal:  Arterioscler Thromb Vasc Biol       Date:  2020-03-12       Impact factor: 8.311

Review 3.  Chemical reporters for exploring protein acylation.

Authors:  Emmanuelle Thinon; Howard C Hang
Journal:  Biochem Soc Trans       Date:  2015-04       Impact factor: 5.407

4.  Posttranslational modifications in proteins: resources, tools and prediction methods.

Authors:  Shahin Ramazi; Javad Zahiri
Journal:  Database (Oxford)       Date:  2021-04-07       Impact factor: 3.451

5.  Advancing Top-down Analysis of the Human Proteome Using a Benchtop Quadrupole-Orbitrap Mass Spectrometer.

Authors:  Luca Fornelli; Kenneth R Durbin; Ryan T Fellers; Bryan P Early; Joseph B Greer; Richard D LeDuc; Philip D Compton; Neil L Kelleher
Journal:  J Proteome Res       Date:  2016-12-02       Impact factor: 4.466

Review 6.  Spatiotemporal changes in the human lens proteome: Critical insights into long-lived proteins.

Authors:  Kevin L Schey; Zhen Wang; Michael G Friedrich; Donita L Garland; Roger J W Truscott
Journal:  Prog Retin Eye Res       Date:  2019-11-06       Impact factor: 21.198

7.  Fluorescent imaging of protein myristoylation during cellular differentiation and development.

Authors:  Andrew J Witten; Karin F K Ejendal; Lindsey M Gengelbach; Meghan A Traore; Xu Wang; David M Umulis; Sarah Calve; Tamara L Kinzer-Ursem
Journal:  J Lipid Res       Date:  2017-07-28       Impact factor: 5.922

8.  Pharmacologically targeting the myristoylation of the scaffold protein FRS2α inhibits FGF/FGFR-mediated oncogenic signaling and tumor progression.

Authors:  Qianjin Li; Omar Awad Alsaidan; Yongjie Ma; Sungjin Kim; Junchen Liu; Thomas Albers; Kebin Liu; Zanna Beharry; Shaying Zhao; Fen Wang; Iryna Lebedyeva; Houjian Cai
Journal:  J Biol Chem       Date:  2018-03-14       Impact factor: 5.157

Review 9.  Proteomic analysis of fatty-acylated proteins.

Authors:  Tao Peng; Emmanuelle Thinon; Howard C Hang
Journal:  Curr Opin Chem Biol       Date:  2015-12-02       Impact factor: 8.822

10.  Development of a Photo-Cross-Linkable Diaminoquinazoline Inhibitor for Target Identification in Plasmodium falciparum.

Authors:  Alexandra S Lubin; Ainoa Rueda-Zubiaurre; Holly Matthews; Hella Baumann; Fabio R Fisher; Julia Morales-Sanfrutos; Kate S Hadavizadeh; Flore Nardella; Edward W Tate; Jake Baum; Artur Scherf; Matthew J Fuchter
Journal:  ACS Infect Dis       Date:  2018-02-05       Impact factor: 5.084

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