An important advantage of pattern-based chemosensor sets is their potential to detect and differentiate a large number of analytes with only few sensors. Here we test this principle at a conceptual limit by analyzing a large set of metal ion analytes covering essentially the entire periodic table, employing fluorescent DNA-like chemosensors on solid support. A tetrameric "oligodeoxyfluoroside" (ODF) library of 6561 members containing metal-binding monomers was screened for strong responders to 57 metal ions in solution. Our results show that a set of 9 chemosensors could successfully discriminate the 57 species, including alkali, alkaline earth, post-transition, transition, and lanthanide metals. As few as 6 ODF chemosensors could detect and differentiate 50 metals at 100 μM; sensitivity for some metals was achieved at midnanomolar ranges. A blind test with 50 metals further confirmed the discriminating power of the ODFs.
An important advantage of pattern-based chemosensor sets is their potential to detect and differentiate a large number of analytes with only few sensors. Here we test this principle at a conceptual limit by analyzing a large set of metal ion analytes covering essentially the entire periodic table, employing fluorescent DNA-like chemosensors on solid support. A tetrameric "oligodeoxyfluoroside" (ODF) library of 6561 members containing metal-binding monomers was screened for strong responders to 57 metal ions in solution. Our results show that a set of 9 chemosensors could successfully discriminate the 57 species, including alkali, alkaline earth, post-transition, transition, and lanthanide metals. As few as 6 ODF chemosensors could detect and differentiate 50 metals at 100 μM; sensitivity for some metals was achieved at midnanomolar ranges. A blind test with 50 metals further confirmed the discriminating power of the ODFs.
Colorimetric and fluorescent
chemosensors have served as detection
tools for many chemical species[1−3] as they can provide sensitive
real-time responses, easily interpreted outputs, access to biological
systems, and structural tunability to fit the application. While the
conventional sensing approach has used one sensor per analyte, much
recent attention has been focused on developing differential or array
sensors, in which a pattern of responses from promiscuous sensor compounds
enables analyte discrimination. In addition to being less labor intensive
to develop than analyte-specific sensors, differential sensors can
discriminate a larger number of analytes than actual elements in the
array by analysis of the combined pattern of responses.[4] This feature lowers the cost and burden of synthesizing
large numbers of sensor molecules and simplifies analysis. Prominent
examples have been reported for differentiating 19 toxic industrial
chemicals with 36 chemically responsive pigments,[5] 5 serum proteins with fluorescent protein–nanoparticle
conjugates,[6] 5 metals with 1 dye and 5
thiols,[7] and 10 volatile organic compounds
with 4 fluorescent oligomers.[8]We
have recently explored the use of DNA mimics with fluorescent
nucleobase surrogates[9] as pattern-based
sensors. These oligodeoxyfluorosides (ODFs) exhibit complex electronic
and structural interactions between the proximal fluorophores, which
can provide widely varied fluorescence responses when interacting
with analytes. Assembling fluorophores on a DNA backbone enables rapid
automated synthesis of such chemosensors on solid supports via a DNA
synthesizer, and the water-soluble free molecules can be released
and used in dissolved form if desired.[10] From previous combinatorial libraries of ODFs, we have identified
sensor compounds that respond to metal ions,[10] organic volatiles,[11] toxic gases,[12] bacterial metabolites,[13] and food spoilage.[14] As mentioned above,
pattern-based sensing offers the intriguing potential for discriminating
many more analytes than sensor compounds. However, to date this possibility
has been tested with only moderate numbers of analytes. Here we test
this principle at a conceptual limit, by attempting to detect and
discriminate nearly all water-soluble metals and metalloids in solution.
We have recently described a library of 6,561 ODF tetramers on polyethylene
glycol (PEG)-polystyrene beads that showed high sensitivity toward
eight heavy metals.[15] Using the same library,
we identified a small set of sequences that are effective in yielding
strong and varied fluorescence responses to a broad range of metal
ions. We report that a set of as few as 6 tetramers on beads can be
used to discriminate 50 different metal species at micromolar concentrations
in aqueous buffer, and 48 out of 50 metal ions were correctly identified
in a blind test, confirming the discrimination power of the ODF molecular
design.
Experimental Section
ODF Synthesis
ODFs were assembled on an Applied Biosystems
DNA synthesizer via standard phosphoramidite chemistry on a 1 μmole
scale with one sequence per bead. Extended coupling times (15 min)
were used to maximize coupling yields. Monomers and the tetramer library
were prepared as described.[9,15] ODFs were characterized
by MALDI-MS and absorption/emission spectra by concurrently preparing
samples for analysis using controlled-pore glass (CPG) support.
Imaging and Analysis of Metal Ion Responses
Imaging
was done in a small Petri dish (Tissue Culture Dish 35 × 10 mm,
Falcon) secured on a microscope slide with double-sided tape. A double-sided
tape was adhered inside the dish and ODF beads (∼5 beads) were
spread out on the tape and gently pressed down. The beads were submerged
and incubated in 2 mL buffer (5 mM 2,4,6-collidine·HNO3, pH 7.3) for 10 min, then imaged using a 4× objective of an
epifluorescence microscope with the exposure setting adjusted so that
the beads were properly exposed (before image; λex = 325–375 nm; λem > 420 nm). The buffer
was then exchanged with the metal ion solution with the targeted concentration
in the same buffer. The Petri dish was covered and incubated in the
dark for 24 h. Second image was then taken with the same exposure
setting (after image). The before/after images were digitally superimposed
using Adobe Photoshop with the inverse-colored “before”
image at the bottom and the “after” image overlaid with
50% transparency to give the grayscale difference image (see Figure 2c).
Figure 2
Sample images of ODF library under an epifluorescence microscope
(λex = 340–380 nm; λem >
420 nm) (a) before and (b) after exposure to Zn(II) and (c) their
inverse overlay, in which beads that show nongray colors contain ODFs
responding to Zn(II). The before/after images were digitally superimposed
with the inverse-colored “before” image at the bottom
and the “after” image overlaid with 50% transparency
to give difference image (c). 50% gray color indicates no change from
(a) to (b); beads lighter than 50% gray indicate lighting up responses
to the metal, while darker beads indicate quenching responses. Colors
indicate color shifts.
Data were obtained by recording Δ
RGB values of individual beads in Adobe Photoshop. A 32 × 32
pixel box was used to capture pixels at the center of each bead, and
the average ΔRGB values within the box were recorded in an Excel
file. The experiment was repeated twice, and 6 sets of ΔRGB
values were recorded per metal per sequence. Control values were also
obtained in the same fashion by incubating the beads in buffer for
24 h. The control ΔRGB values were then averaged and subtracted
from the corresponding values of each metal. The resulting gray-scale
RGB changes were then multiplied by 2 to obtain the full RGB changes.
These ΔRGB values were processed using statistical analysis
program XLSTAT (Addinsoft Inc.) and analyzed by discriminant analysis
and agglomerative hierarchical clustering (See Experimental Methods
in Supporting Information).
Results
and Discussion
Library Construction, Screening, and Decoding
To find
metal-responsive ODF sequences, we employed a combinatorial library
composed of tetramer-length sequences with 9 distinct monomers on
130 μm polystyrene beads as described.[9] As monomers, the library included simple fluorescent nucleosides
(Y and E)[9] and spacers (H, L, S)[10] to diversify the fluorophore interactions, and
four fluorescent ligands[15] (BC, BP, HQ,
and QB) for metal binding (Figure 1). These
latter four—inspired by known fluorescent metal ligands[16−19]—were expected to exhibit diverse affinities to a range of
metals. All nucleosides were appended with 5′-dimethoxytrityl
and 3′-phosphoramidite groups to allow their use in library
construction with standard split-and-mix procedure employing a DNA
synthesis cycle.[9] The resulting ODF library
shows a large variation in emission colors and intensity under the
epifluorescence microscope (excitation filter 340–380 nm; long-pass
emission >420 nm; Figure 2).
Figure 1
ODFs described in this study. (a) Monomers included in the metal
ion sensing library. (b) Representative structure of an ODF: BP-HQ-S-HQ
(sequence named 5′→ 3′). The sphere represents
a PEG-polystyrene bead, 130 μm diameter.
ODFs described in this study. (a) Monomers included in the metal
ion sensing library. (b) Representative structure of an ODF: BP-HQ-S-HQ
(sequence named 5′→ 3′). The sphere represents
a PEG-polystyrene bead, 130 μm diameter.Sample images of ODF library under an epifluorescence microscope
(λex = 340–380 nm; λem >
420 nm) (a) before and (b) after exposure to Zn(II) and (c) their
inverse overlay, in which beads that show nongray colors contain ODFs
responding to Zn(II). The before/after images were digitally superimposed
with the inverse-colored “before” image at the bottom
and the “after” image overlaid with 50% transparency
to give difference image (c). 50% gray color indicates no change from
(a) to (b); beads lighter than 50% gray indicate lighting up responses
to the metal, while darker beads indicate quenching responses. Colors
indicate color shifts.As analytes, we included essentially all the water-soluble
metal
ions (57 species in total) to broadly test the differentiation power
of these ODFs. For metals with multiple redox states, we chose the
most common or stable form. Where water-soluble sodium or nitrate
salts were unavailable, the ammonium,oxide, chloride, or fluoride
salts were used (Supporting Information, Table S1).To prevent fluorescence changes due to pH, we
used 5 mM 2,4,6-collidine·HNO3 (pH 7.3) as this buffer
was shown to be a weak metal ligand.[20] We
performed screening experiments by incubating
the beads in 250 and 1 μM buffered metal ion solutions for 1
h and successfully identified and decoded[21] 174 ODF sequences that responded strongly to a test set of 36 metal
ions (see Figure 2 for an example). From these
174 candidates we selected 9 sequences for resynthesis aiming to diversify
monomers in the sequences, color of the ODFs, the metal to which the
sequence responded, the type (quenching, lighting up or color change)
and amplitude of fluorescence changes in the sensor set (Table 1). The chosen sequences were simultaneously synthesized
both on 130 μm polystyrene beads for sensing and on CPG for
characterization. The ODFs on the CPG were cleaved and deprotected,
purified by HPLC, and characterized by mass spectrometry (Supporting Information, Table S2), absorption
and emission spectra (Supporting Information, Figure S1).
Table 1
Images of Selected ODF Sequences on
Beads before and after Exposure to Cd(II) at 100 μM
Discriminant analysis plots of ODF responses
to (a) alkali metals,
(b) alkaline earth metals, (c) post-transition metals, and (d) lanthanides.
95% confidence circles are shown in each figure. Note that some of
the circles are covered by the data points. Metal concentrations are
100 mM in (a) and 100 μM in (b–d). Data were obtained
by imaging beads containing ODFs after 24 h incubation in metal solutions
(See Experimental Methods in Supporting Information for interpretation of the DA plots).We cross-screened the full set of 57 metals with our 9 sensors
on beads, using 100 μM to evaluate the detection and differentiation
of this broad range of metal species (See Table 1 for an example). At this concentration, 50 of 57 metals were discriminated
(see analyses below); the remaining 7 (alkali metals, Re and W), however,
required higher concentrations for successful discrimination. Taken
as a whole, the sensor compounds showed highly varied emission changes
but retained reproducible responses for each metal tested (see ΔRGB
data in Supporting Information, Figure
S2).
Detection and Differentiation of Alkali Metals
Due
to their low charge density,[22] alkali metal
ions are notoriously difficult to detect and differentiate via fluorescence
chemosensors and require relatively high metal concentrations.[17,23] During the experiments, we found that incubating the beads for 24
h provided enough time for most of the metals to reach equilibrium
and yielded stronger and more reproducible results, and hence this
procedure was used for the remaining study. We measured the responses
of the 9-ODF set with the five alkali metals (Li+, Na+, K+, Rb+, Cs+) at 100 mM.
Of the identified responding ODFs, sequences containing BC showed
relatively strong responses, suggesting that the crown ether substructure
of BC may assist in recognition of the alkali metals. Significantly,
the relatively small responses to alkali metals at lower concentrations
were beneficial to the rest of our studies as we used a number of
anionic metal complexes as analytes with sodium or potassium counterions.
Background signals from these counterions were thus minimized in subsequent
experiments.Each sensing response for a given metal was measured
with six separate beads to test reproducibility, and changes in fluorescence
intensity were quantified in red, green, and blue color channels,
generating ΔRGB data (Supporting Information, Figure S2). To quantitatively evaluate responses of the nine chemosensors
as a pattern, we employed discriminant analysis (DA) and agglomerative
hierarchical clustering (AHC). The analyses confirm successful differentiation
of all five metals at 100 mM. Based on the DA, pattern responses from
Li+, Na+, and Cs+ are strongly differentiated
(Figure 3a), while responses to K+ and Rb+ are clustered more closely. The 95% confidence
circles for the five metals are well separated even in the first two
dimensions with 91.7% of the discrimination captured. “Leave-one-out”
analysis—a technique performed with DA to evaluate the validity
of the analysis of the data set—reveals 80% identification
accuracy for the alkali metals, with K+ and Rb+ most likely to be confused. The AHC analysis shows similar results
(Supporting Information, Figure S3), with
all of the experimental trials from each metal clustered and distinct
from the other metals.
Figure 3
Discriminant analysis plots of ODF responses
to (a) alkali metals,
(b) alkaline earth metals, (c) post-transition metals, and (d) lanthanides.
95% confidence circles are shown in each figure. Note that some of
the circles are covered by the data points. Metal concentrations are
100 mM in (a) and 100 μM in (b–d). Data were obtained
by imaging beads containing ODFs after 24 h incubation in metal solutions
(See Experimental Methods in Supporting Information for interpretation of the DA plots).
Detection and Identification of Other Metals
at 100 μM
Alkaline earth metals revealed much stronger
responses than alkali
metals, even at 103-fold lower concentration. Notably,
ODF sequences containing multiple HQ monomers (e.g., S-HQ-HQ-HQ and
BP-HQ-S-HQ) showed a strong lighting-up response, whereas sequences
with a single HQ did not (Y-HQ-BC-E and QB-L-HQ-BC), implying cooperative
metal binding by multiple monomers. This lighting-up response was
period-dependent, with Be2+ being the strongest, while
other sequences showed similar quenching independent of period (Supporting Information, Figure S2).The
DA plot shows distinct separation outside the 95% confidence circles
with F1 capturing 99.36% of the discrimination (Figure 3b); the high discrimination captured on F1 indicates that
the use of an array and multivariate statistical analysis tools might
be unnecessary[4] as the differential responses
from the five metals predominantly come from S-HQ-HQ-HQ and BP-HQ-S-HQ
(see quantitative responses of ODF sensors in Supporting Information, Figure S2). Because of the sufficient
differential responses from S-HQ-HQ-HQ and BP-HQ-S-HQ, “leave-one-out”
analysis shows differentiation with 100% identification accuracy;
Ca2+, Sr2+, Ba2+ and Be2+, Mg2+ form two distinct subgroups in the AHC dendrogram
(Supporting Information, Figure S4).Next we turned to the analysis of six post-transition metals at
100 μM: Al(III) and Ga(III) illuminated the multi-HQ sequences;
Pb(II) quenched all the sequences, while In(III), Sn(II), and Tl(I)
yielded weaker but characteristic signals (Supporting
Information, Figure S2). DA and AHC reveal complete differentiation
of all six post-transition metals (Figure 3c and Supporting Information, Figure S5)
with 100% identification accuracy according to “leave-one-out”
analysis. As expected, the three metals yielding smaller ΔRGB
signals (In(III), Tl(I), and Sn(II)) lie closest on the DA and AHC
plots, while those that show strong signals (Al(III), Ga(III), and
Pb(II)) are more widely separated.For the lanthanide series,
we tested the 14 nonradioactive metals
at 100 μM. Notable among the responses from the nine sensors
were strong lighting up by La(III) and Lu(III) (e.g., with S-HQ-HQ-HQ
and BP-HQ-S-HQ), strong quenching by Nd(III) (all sequences), and
color shifts with Eu(III) (a distinct blue shift with BP-H-S-S) and
Gd(III) (with red shifts of S-HQ-HQ-HQ and BP-HQ-S-HQ). The remaining
nine lanthanides, which yielded smaller color shifts and quenching
patterns, were grouped more closely (Figure 3d). Lanthanides are known to be difficult to differentiate because
of their similar chemical properties; for example, almost no differentiation
was found between Eu(III) and Gd(III) even at 10 mM in a previous
report.[24] However, the discrimination in
the current study using ODFs between the 14 lanthanides is clear even
in the 2-D DA plot. “Leave-one-out” analysis validates
the high cross-responsiveness of ODFs toward lanthanides, showing
100% identification accuracy. AHC also clearly groups each experimental
trial together, demonstrating high repeatability that enables discrimination
even with small differences in response (Supporting
Information, Figure S6).For the transition metals, we
excluded Hf and Ru due to their low
aqueous solubility but included Cr(VI) along with Cr(III), as both
are important stable oxidation states of Cr. Among the 27 metals tested,
our sensors displayed a broad variety of response signals for 25 species
at 100 μM. The sensors failed to show responses over background
at 100 μM to the oxoanions of Re(VII) and W(VI), but detectable
responses were seen at 500 μM (Supporting
Information, Figure S7). Notable trends included strong fluorescence
responses with the first-row transition metals except for Fe(III)
and Ti(IV). Metal anionic complexes usually showed medium to weak
signals (Ti(IV), Cr(VI), Zr(IV), Nb(V), Mo(VI), Rh(III), Ta(V), W(VI),
Re(VII), Ir(IV), and Pt(II), except Os(VI)), possibly due to the dearth
of accessible ligand binding sites on the metals. In general, we found
that chloride complexes (Rh(III), Ir(IV) and Pt(II)) yielded stronger
responses than oxide (Cr(VI) and Mo(VI)) and fluoride complexes (Ti(VI),
Zr(IV), Nb(V) and Ta(V)), probably due to the strong metal-oxygen
and -fluoride bonds. S-HQ-HQ-HQ and BP-HQ-S-HQ became brighter when
exposed to Group III metals (Y(III) and Sc(III)). Cd(II) and Zn(II)
color-shifted the QB containing sequences and illuminated only S-HQ-HQ-HQ.
However, these trends shared by Cd(II) and Zn(II) were absent in the
last d10 metal, Hg(II), which yielded quenching with all
sequences, thus allowing ready differentiation from the former metals.Dendrogram
from agglomerative hierarchical clustering (AHC) of
detecting 25 transition-metal ions at 100 μM with nine ODF sensors
in buffered deionized water grouped by similarities of response. Note
that all the experimental trials of each metal are grouped together.The 25 transition metals all showed
significant signals above background
at 100 μM. DA separates the metals that provided strong lighting
up responses and clusters those that gave strong quenching and weak
signals into two groups (Supporting Information, Figure S8). “Leave-one-out” analysis confirms this
finding, showing that the accuracy of the differentiation is 99.33%.
Complete differentiation of all 25 transition metals is also observed
with AHC analysis (Figure 4).
Figure 4
Dendrogram
from agglomerative hierarchical clustering (AHC) of
detecting 25 transition-metal ions at 100 μM with nine ODF sensors
in buffered deionized water grouped by similarities of response. Note
that all the experimental trials of each metal are grouped together.
As a control
experiment, we also measured the fluorescence responses
of the ammonium,chloride and fluoride counterions in the same buffer
content. Only minimal signals were observed at 100 μM, confirming
that the fluorescence changes of ODFs indeed came from the metals
(Supporting Information, Figure S9).
Analysis of the Entire Set of Metal Ions
To explore
the number of metals this chemosensor set can differentiate, we used
the ΔRGB values obtained with all sensors and 50 metals at 100
μM and performed an overall AHC analysis. AHC successfully grouped
all the trials from each metal in a subgroup, showing complete differentiation
of 50 metals. On the dendrogram, three chief families of response
are seen (Figure 5 and Supporting Information, Figure S10): Family A contains metals
that yielded turn-on signals with at least one of two sequences (S-HQ-HQ-HQ
and BP-HQ-S-HQ) and family B metals strongly quenched most sequences.
Family C can be divided into two subfamilies C1 and C2: C1 includes
many lanthanides and other metals that provided moderate changes,
and C2 contains metals that only yielded moderate to small changes.
DA with “leave-one-out” analysis shows that identification
accuracy is 99.67%. Thus, we conclude that the 9 sensors as a set
can show diverse responses of sufficient magnitude to identify 50
different metals at 100 μM.
Figure 5
Summary of (a) AHC analysis of the cross
screening between 9 chemosensors
and 50 metals at 100 μM. Four major classes of response were
observed in our AHC data. The numbers in the parentheses indicate
the number of metals in that subfamily and (b) discrimination power
of nine ODF sequences at various metal concentrations for 57 metal
species. Colors denote the lowest concentrations for which a species
was successfully detected and differentiated.
Summary of (a) AHC analysis of the cross
screening between 9 chemosensors
and 50 metals at 100 μM. Four major classes of response were
observed in our AHC data. The numbers in the parentheses indicate
the number of metals in that subfamily and (b) discrimination power
of nine ODF sequences at various metal concentrations for 57 metal
species. Colors denote the lowest concentrations for which a species
was successfully detected and differentiated.As a more restrictive test of the signal diversity in these
DNA
polyfluorophore compounds, we sought to determine the minimal number
of sequences required to differentiate the 50 metals detected at 100
μM. We found that only 6 of the 9 sequences (BP-H-S-S, BP-HQ-S-HQ,
S-HQ-HQ-HQ, QB-H-E-S, QB-L-H-QB and QB-L-HQ-BC) are sufficient to
differentiate 48 of these 50 metals, with only a slight mixing between
Cu(II) and Ni(II) (Supporting Information, Figure S11). These last two metals strongly quenched all sequences,
but they can be easily differentiated at a lower concentration where
differential quenching is seen (see below).The broad data set
also allowed us to evaluate the individual ODFs
to measure their diversifying power. From the AHC analysis of the
individual sequences toward the 50 analyzed metals, we observed that
the sequence S-HQ-HQ-HQ alone, which shows the most diverse signals,
can differentiate 15 metals due to its ability to exhibit strong quenching
(e.g., Ni(II) and Cu(II)), lighting up (Be(II) and Al(III)), and color
change (Ga(III) and Gd(III)) responses toward the analytes (Supporting Information, Figure S12). Thus, 130
μm beads each containing ∼1 pmole of a single ODF dye
can be used to distinguish up to 15 different analytes from 57 possibilities
in a few drops of solution by simple fluorescence imaging.To
test the sensitivity of the ODF chemosensors, we evaluated responses
of the 9-ODF set with 50 metals at 20-fold lower concentration (5
μM). As expected, the overall amplitude of fluorescence changes
decreased. However, the AHC analysis revealed that 30 of 50 metals
can still be differentiated (Supporting Information, Figure S13). For those that showed overlapping signals, many were
metal anionic complexes (Cr(VI), Ti(IV), Zr(IV), Nb(V), Mo(VI), and
Rh(III)). Figure 5 summarizes our screening
results. Overall, these sensors are most sensitive toward transition
metals and least sensitive to the alkali metals, with lanthanides,
alkaline earths, and post-transition metals falling in the intermediate
range.As a sensitivity comparison between the current and previous
sets
of ODFmetal sensors,[10] we titrated BP-H-S-S
in solution with varying concentrations of Co(II), Cu(II), and Ni(II)
from 1 nM to 100 μM. Similar to the earlier study, the titration
curves appeared to be sigmoidal, consistent with one-site binding
at the tested concentration range (Supporting
Information, Figure S14). The new ODF showed high binding affinity
toward Cu(II), Ni(II), and Co(II), with binding transitions at midnanomolar
ranges. The enhanced sensitivity may reflect stronger metal ligands
in the current library.We further examined the concentration
dependence of the 6-ODF set
toward 8 selected metals representing alkaline earth, post-transition,
transition metals and lanthanides to approximate the detection limit
and the dynamic range of the ODF sensors (Figure 6 and Supporting Information Figures
S15 and S16). The 6 ODFs exhibited strong responses between 100 and
1 μM, but the signals decreased below 1 μM except with
Ag(I) and Cu(II), which remained relatively strong above 100 nM (Figure 6). This indicates that the detection limits of these
ODFs on solid supports for most of the metals are in the low micromolar
to high nanomolar range.
Figure 6
Concentration
curves plotted using the centroids of six replicates
from the discriminant analysis for (a) Ag(I) and (b) Cu(II). Concentrations
are noted next to the centroids.
Finally, as a rigorous test of the
differentiation power of ODFs,
we prepared 50 unknown metal ion solutions—each containing
100 μM of one metal—as a blind experiment using the minimal
6-ODF set described above. Using the ΔRGB values from both the
unknown and 100 μM reference samples, we could assign each unknown
by grouping its data with the full-metal set data from AHC (Supporting Information, Figure S17). Table S3 summarizes the results of the unknown
assignment. AHC correctly grouped 48 out of 50 unknowns with its corresponding
metal. A group of metals that were unidentified initially were the
strongly quenching ones (Os(VI), Co(II) and Cu(II)), leaving unknowns
25, 40, 42 tentatively unassigned. However, simple dilution of these
last three unknowns to 5 μM allowed us to differentiate their
quenched responses, assigning them correctly to their corresponding
metals (Supporting Information, Figure
S18). The last two unknowns (45 and 48) are assigned to Zr(IV), and
no metal was assigned to In(III), leaving these last two metals undifferentiated
from one another. As both of them belong to family C2 to which the
sensors gave low responses, it is unsurprising that they could be
confused with each other.Our experiments demonstrate diverse
ODF responses, yielding sensitivity
and selectivity across 57 metal ions covering most of the periodic
table. We know of no prior examples of simultaneous detection and
differentiation of such a large set of metal analytes at micromolar
range. One previous fluorescence sensing study used relatively large
numbers of metal analytes; however, that study employed 47 commercially
available dyes to detect 47 cations in aqueous/organic cosolvent at
10 mM.[24] In contrast, the current experiments
show that only six fluorescent sensors can distinguish an even larger
set of metals. Undoubtedly, the high electronic complexity of the
ODF chromophores contributes to the diverse responses from each sequence.
Moreover, the current chemosensors on beads were able to differentiate
50 analytes at 100-fold lower concentration than the previous study.
We hypothesize that this high sensitivity is due to the monomer designs
that contain relatively high-affinity fluorescent ligands.The
ODFs’ multichromophore structure contributes favorably
to the response diversity by yielding emission across the visible
spectrum and therefore, allowing us to gather data in three broad
color channels. Indeed, we observed that even a single sensor compound
could discriminate as many as 15 different metal species (Supporting Information, Figure S12). It is likely
that in the future, one could measure responses at finer granularity
than three channels by use of more sophisticated wavelength/intensity
analysis; this could allow for yet greater diversity of responses,
making possible the detection of an even larger number of analytes
or discriminating complex mixtures (even closely related ones) from
one another. Despite the complexity of their fluorescence emission
behavior, all of the current ODFs are excited at a single wavelength
and analyzed using only one filter set.The use of ODFs on solid
support, as opposed to dissolved in solution,[10] offers the advantage of consuming extremely
small amounts of material per experiment. With the current 130 μm
beads, a sensing measurement requires only ∼1 pmole of sensor
and small volume of analyte (50 μL is feasible without a specialized
compartment). A single synthesis run of an ODF generates approximately
5 × 105 beads, so cost per experiment is very small.
In addition, the use of the ODFs on solid support also enables the
use of a simple microscope with RGB camera to quantify results as
opposed to a spectrophotometer. One potential limitation of localizing
these ODF sensors on PEG–PS beads may be the kinetics of analyte
diffusion and binding. Although we observed fluorescence changes in
1 h during screening, the number of metals that our sensors responded
to increased from 37 to 50 as we changed our incubation time from
1 to 24 h. It is possible that the beads, as opposed to inherently
slow ligand–metal binding kinetics, contributed to this slower
response. In the future it may be advantageous to test higher temperatures
and mixing or flow strategies to enhance response rates.Concentration
curves plotted using the centroids of six replicates
from the discriminant analysis for (a) Ag(I) and (b) Cu(II). Concentrations
are noted next to the centroids.In conclusion, we have employed a fluorescent DNA-like combinatorial
library to screen for fluorescence responders to metal ions. We demonstrated
the differentiating power of ODFs with simultaneous discrimination
of 50 metals at 100 μM and 30 metals at 5 μM. In a blind
test scenario, we were able to identify 48 out of 50 metals by only
using 6 fluorescent probes. In the future, it will be of interest
to examine the mechanisms of metal detection for ODFs, especially
for those metals that show similar responses. In addition, as our
study included a single ion per experiment, it will be interesting
to see how a mixture of metal ions would affect the sensor responses
as a relative strength of pattern-based chemosensing is the ability
to respond to and differentiate complex mixtures.[25]
Authors: Lik Hang Yuen; Raphael M Franzini; Shenliang Wang; Pete Crisalli; Vijay Singh; Wei Jiang; Eric T Kool Journal: Angew Chem Int Ed Engl Date: 2014-04-22 Impact factor: 15.336