Literature DB >> 25251853

The relations between recombination rate and patterns of molecular variation and evolution in Drosophila.

Brian Charlesworth1, José L Campos.   

Abstract

Genetic recombination affects levels of variability and the efficacy of selection because natural selection acting at one site affects evolutionary processes at linked sites. The variation in local recombination rates across the Drosophila genome provides excellent material for testing hypotheses concerning the evolutionary consequences of recombination. The current state of knowledge from studies of Drosophila genomics and population genetics is reviewed here. Selection at linked sites has influenced the relations between recombination rates and patterns of molecular variation and evolution, such that higher rates of recombination are associated with both higher levels of variability and a greater efficacy of selection. It seems likely that background selection against deleterious mutations is a major factor contributing to these patterns in genome regions in which crossing over is rare or absent, whereas selective sweeps of positively selected mutations probably play an important role in regions with crossing over.

Entities:  

Keywords:  Hill-Robertson interference; codon usage; crossing over; efficacy of selection; nucleotide site diversity; repetitive DNA

Mesh:

Year:  2014        PMID: 25251853     DOI: 10.1146/annurev-genet-120213-092525

Source DB:  PubMed          Journal:  Annu Rev Genet        ISSN: 0066-4197            Impact factor:   16.830


  33 in total

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2.  The Effects on Neutral Variability of Recurrent Selective Sweeps and Background Selection.

Authors:  José Luis Campos; Brian Charlesworth
Journal:  Genetics       Date:  2019-03-28       Impact factor: 4.562

3.  Passenger pigeon genomic diversity and extinction.

Authors:  P W Hedrick
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Review 4.  Coevolution between transposable elements and recombination.

Authors:  Tyler V Kent; Jasmina Uzunović; Stephen I Wright
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-12-19       Impact factor: 6.237

5.  Genomic Landscape of Long Terminal Repeat Retrotransposons (LTR-RTs) and Solo LTRs as Shaped by Ectopic Recombination in Chicken and Zebra Finch.

Authors:  Yanzhu Ji; J Andrew DeWoody
Journal:  J Mol Evol       Date:  2016-05-06       Impact factor: 2.395

6.  Estimating the parameters of background selection and selective sweeps in Drosophila in the presence of gene conversion.

Authors:  José Luis Campos; Lei Zhao; Brian Charlesworth
Journal:  Proc Natl Acad Sci U S A       Date:  2017-05-30       Impact factor: 11.205

7.  Why do plants need the ZMM crossover pathway? A snapshot of meiotic recombination from the perspective of interhomolog polymorphism.

Authors:  Piotr A Ziolkowski
Journal:  Plant Reprod       Date:  2022-07-12       Impact factor: 4.217

8.  Resolving the Conflict Between Associative Overdominance and Background Selection.

Authors:  Lei Zhao; Brian Charlesworth
Journal:  Genetics       Date:  2016-05-06       Impact factor: 4.562

9.  Population Genomics of the Maize Pathogen Ustilago maydis: Demographic History and Role of Virulence Clusters in Adaptation.

Authors:  Gabriel Schweizer; Muhammad Bilal Haider; Gustavo V Barroso; Nicole Rössel; Karin Münch; Regine Kahmann; Julien Y Dutheil
Journal:  Genome Biol Evol       Date:  2021-05-07       Impact factor: 3.416

10.  A novel electronic assessment strategy to support applied Drosophila genetics training in university courses.

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Journal:  G3 (Bethesda)       Date:  2015-02-25       Impact factor: 3.154

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