Literature DB >> 25249249

The evolution of cancer-related genes in hominoids.

Lin Kang1, Pawel Michalak.   

Abstract

The evolution of cancer suppression is essential for the maintenance of multicellularity. The lack of correlation between body size and cancer risk across species, known as Peto's paradox, suggests that genetic variation in cancer resistance is sufficient to compensate for increases of cell numbers in bigger animals. To assess evolutionary dynamics of cancer-related genes, we analyzed Ka, Ks,and Ka/Ks values in 120 oncogenes and tumor suppressor genes (TSG) among seven hominoid species, including two extinct species, Neanderthal and Denisovan. Ka/Ks of tumor suppressor genes tended to be higher relative to that of oncogenes, consistent with relaxed purifying selection acting on the former. Ka/Ks values were positively correlated with TSG scores, but negatively correlated with oncogene scores, suggesting opposing selection pressures operating on the two groups of cancer-related genes. Additionally, we found 108 species-divergent substitutions that were prevalent germline genotypes in some species but in humans appeared only as somatic cancerous mutations. Better understanding the resistance to cancer may lead to new methods of cancer prevention in humans.

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Year:  2014        PMID: 25249249     DOI: 10.1007/s00239-014-9649-5

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  25 in total

1.  Population genetics of tumor suppressor genes.

Authors:  Yoh Iwasa; Franziska Michor; Natalia L Komarova; Martin A Nowak
Journal:  J Theor Biol       Date:  2004-11-25       Impact factor: 2.691

2.  A high-coverage genome sequence from an archaic Denisovan individual.

Authors:  Matthias Meyer; Martin Kircher; Marie-Theres Gansauge; Heng Li; Fernando Racimo; Swapan Mallick; Joshua G Schraiber; Flora Jay; Kay Prüfer; Cesare de Filippo; Peter H Sudmant; Can Alkan; Qiaomei Fu; Ron Do; Nadin Rohland; Arti Tandon; Michael Siebauer; Richard E Green; Katarzyna Bryc; Adrian W Briggs; Udo Stenzel; Jesse Dabney; Jay Shendure; Jacob Kitzman; Michael F Hammer; Michael V Shunkov; Anatoli P Derevianko; Nick Patterson; Aida M Andrés; Evan E Eichler; Montgomery Slatkin; David Reich; Janet Kelso; Svante Pääbo
Journal:  Science       Date:  2012-08-30       Impact factor: 47.728

3.  A draft sequence of the Neandertal genome.

Authors:  Johannes Krause; Adrian W Briggs; Tomislav Maricic; Udo Stenzel; Martin Kircher; Nick Patterson; Richard E Green; Heng Li; Weiwei Zhai; Markus Hsi-Yang Fritz; Nancy F Hansen; Eric Y Durand; Anna-Sapfo Malaspinas; Jeffrey D Jensen; Tomas Marques-Bonet; Can Alkan; Kay Prüfer; Matthias Meyer; Hernán A Burbano; Jeffrey M Good; Rigo Schultz; Ayinuer Aximu-Petri; Anne Butthof; Barbara Höber; Barbara Höffner; Madlen Siegemund; Antje Weihmann; Chad Nusbaum; Eric S Lander; Carsten Russ; Nathaniel Novod; Jason Affourtit; Michael Egholm; Christine Verna; Pavao Rudan; Dejana Brajkovic; Željko Kucan; Ivan Gušic; Vladimir B Doronichev; Liubov V Golovanova; Carles Lalueza-Fox; Marco de la Rasilla; Javier Fortea; Antonio Rosas; Ralf W Schmitz; Philip L F Johnson; Evan E Eichler; Daniel Falush; Ewan Birney; James C Mullikin; Montgomery Slatkin; Rasmus Nielsen; Janet Kelso; Michael Lachmann; David Reich; Svante Pääbo
Journal:  Science       Date:  2010-05-07       Impact factor: 47.728

4.  Natural selection on genes that underlie human disease susceptibility.

Authors:  Ran Blekhman; Orna Man; Leslie Herrmann; Adam R Boyko; Amit Indap; Carolin Kosiol; Carlos D Bustamante; Kosuke M Teshima; Molly Przeworski
Journal:  Curr Biol       Date:  2008-06-24       Impact factor: 10.834

5.  Mutation and cancer: statistical study of retinoblastoma.

Authors:  A G Knudson
Journal:  Proc Natl Acad Sci U S A       Date:  1971-04       Impact factor: 11.205

6.  Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega.

Authors:  Fabian Sievers; Andreas Wilm; David Dineen; Toby J Gibson; Kevin Karplus; Weizhong Li; Rodrigo Lopez; Hamish McWilliam; Michael Remmert; Johannes Söding; Julie D Thompson; Desmond G Higgins
Journal:  Mol Syst Biol       Date:  2011-10-11       Impact factor: 11.429

7.  Identification of new p53 target microRNAs by bioinformatics and functional analysis.

Authors:  Alessandra Bisio; Veronica De Sanctis; Valerio Del Vescovo; Michela A Denti; Anil G Jegga; Alberto Inga; Yari Ciribilli
Journal:  BMC Cancer       Date:  2013-11-21       Impact factor: 4.430

8.  Estimating the phylogeny and divergence times of primates using a supermatrix approach.

Authors:  Helen J Chatterjee; Simon Y W Ho; Ian Barnes; Colin Groves
Journal:  BMC Evol Biol       Date:  2009-10-27       Impact factor: 3.260

9.  Pronounced cancer resistance in a subterranean rodent, the blind mole-rat, Spalax: in vivo and in vitro evidence.

Authors:  Irena Manov; Mark Hirsh; Theodore C Iancu; Assaf Malik; Nick Sotnichenko; Mark Band; Aaron Avivi; Imad Shams
Journal:  BMC Biol       Date:  2013-08-09       Impact factor: 7.431

10.  High-molecular-mass hyaluronan mediates the cancer resistance of the naked mole rat.

Authors:  Xiao Tian; Jorge Azpurua; Christopher Hine; Amita Vaidya; Max Myakishev-Rempel; Julia Ablaeva; Zhiyong Mao; Eviatar Nevo; Vera Gorbunova; Andrei Seluanov
Journal:  Nature       Date:  2013-06-19       Impact factor: 49.962

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  4 in total

1.  Increased risk of cancer in dogs and humans: a consequence of recent extension of lifespan beyond evolutionarily-determined limitations?

Authors:  Aaron L Sarver; Kelly M Makielski; Taylor A DePauw; Ashley J Schulte; Jaime F Modiano
Journal:  Aging Cancer       Date:  2022-02-23

2.  Cell size and cancer: a new solution to Peto's paradox?

Authors:  Sebastian Maciak; Pawel Michalak
Journal:  Evol Appl       Date:  2014-11-07       Impact factor: 5.183

3.  Unique divergence of the breast cancer 2 (BRCA2) gene in Neanderthals.

Authors:  Pawel Michalak; Lin Kang
Journal:  Hereditas       Date:  2018-11-03       Impact factor: 3.271

4.  Identifying key questions in the ecology and evolution of cancer.

Authors:  Antoine M Dujon; Athena Aktipis; Catherine Alix-Panabières; Sarah R Amend; Amy M Boddy; Joel S Brown; Jean-Pascal Capp; James DeGregori; Paul Ewald; Robert Gatenby; Marco Gerlinger; Mathieu Giraudeau; Rodrigo K Hamede; Elsa Hansen; Irina Kareva; Carlo C Maley; Andriy Marusyk; Nicholas McGranahan; Michael J Metzger; Aurora M Nedelcu; Robert Noble; Leonard Nunney; Kenneth J Pienta; Kornelia Polyak; Pascal Pujol; Andrew F Read; Benjamin Roche; Susanne Sebens; Eric Solary; Kateřina Staňková; Holly Swain Ewald; Frédéric Thomas; Beata Ujvari
Journal:  Evol Appl       Date:  2021-02-08       Impact factor: 5.183

  4 in total

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