Literature DB >> 25243591

Description of embryonic development of spotted green pufferfish (Tetraodon nigroviridis).

Andreas Zaucker1, Türker Bodur, Hugues Roest Crollius, Yavor Hadzhiev, Jochen Gehrig, Felix Loosli, Craig Watson, Ferenc Müller.   

Abstract

Pufferfish species of the Tetraodontidae family carry the smallest genomes among vertebrates. Their compressed genomes are thought to be enriched for functional DNA compared to larger vertebrate genomes, and they are important models for comparative genomics. The significance of pufferfish as model organisms in comparative genomics is due to the availability of two sequenced genomes, that of spotted green pufferfish (Tetraodon nigroviridis) and fugu (Takifugu rubripes). However, there is only a very limited utilization of pufferfish as an experimental model organism, due to the lack of established husbandry and developmental genetics protocols. In this study, we provide the first description of the normal embryonic development of Tetraodon nigroviridis. Embryos were obtained by in vitro fertilization of eggs, and subsequent development was monitored by brightfield microscopy at constant temperature. Tetraodon development was divided into distinct stages based on diagnostic morphological features, which were adopted from published literature on normal development of other fish species like medaka (Oryzias latipes), zebrafish (Danio rerio), and fugu. Tetraodon embryos show more similar morphologies to medaka than to zebrafish, reflecting its phylogenetic position. The early developmental stage series described in this study forms the foundation for the utilization of tetraodon as an experimental model organism for comparative developmental studies.

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Year:  2014        PMID: 25243591      PMCID: PMC4248246          DOI: 10.1089/zeb.2014.0984

Source DB:  PubMed          Journal:  Zebrafish        ISSN: 1545-8547            Impact factor:   1.985


  19 in total

1.  Estimate of human gene number provided by genome-wide analysis using Tetraodon nigroviridis DNA sequence.

Authors:  H Roest Crollius; O Jaillon; A Bernot; C Dasilva; L Bouneau; C Fischer; C Fizames; P Wincker; P Brottier; F Quétier; W Saurin; J Weissenbach
Journal:  Nat Genet       Date:  2000-06       Impact factor: 38.330

2.  Highly conserved syntenic blocks at the vertebrate Hox loci and conserved regulatory elements within and outside Hox gene clusters.

Authors:  Alison P Lee; Esther G L Koh; Alice Tay; Sydney Brenner; Byrappa Venkatesh
Journal:  Proc Natl Acad Sci U S A       Date:  2006-04-24       Impact factor: 11.205

3.  Embryogenic staging of fugu, Takifugu rubripes, and expression profiles of aldh1a2, aldh1a3 and cyp26a1.

Authors:  Susumu Uji; Tadahide Kurokawa; Hisashi Hashimoto; Tohru Kasuya; Tohru Suzuki
Journal:  Dev Growth Differ       Date:  2011-06       Impact factor: 2.053

4.  Stages of embryonic development of the zebrafish.

Authors:  C B Kimmel; W W Ballard; S R Kimmel; B Ullmann; T F Schilling
Journal:  Dev Dyn       Date:  1995-07       Impact factor: 3.780

5.  NIH Image to ImageJ: 25 years of image analysis.

Authors:  Caroline A Schneider; Wayne S Rasband; Kevin W Eliceiri
Journal:  Nat Methods       Date:  2012-07       Impact factor: 28.547

6.  Use of a novel induced spawning technique for the first reported captive spawning of Tetraodon nigroviridis.

Authors:  Craig A Watson; Jeffrey E Hill; Jeffrey Scott Graves; Amy L Wood; Kathy Heym Kilgore
Journal:  Mar Genomics       Date:  2009-05-09       Impact factor: 1.710

7.  Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype.

Authors:  Olivier Jaillon; Jean-Marc Aury; Frédéric Brunet; Jean-Louis Petit; Nicole Stange-Thomann; Evan Mauceli; Laurence Bouneau; Cécile Fischer; Catherine Ozouf-Costaz; Alain Bernot; Sophie Nicaud; David Jaffe; Sheila Fisher; Georges Lutfalla; Carole Dossat; Béatrice Segurens; Corinne Dasilva; Marcel Salanoubat; Michael Levy; Nathalie Boudet; Sergi Castellano; Véronique Anthouard; Claire Jubin; Vanina Castelli; Michael Katinka; Benoît Vacherie; Christian Biémont; Zineb Skalli; Laurence Cattolico; Julie Poulain; Véronique De Berardinis; Corinne Cruaud; Simone Duprat; Philippe Brottier; Jean-Pierre Coutanceau; Jérôme Gouzy; Genis Parra; Guillaume Lardier; Charles Chapple; Kevin J McKernan; Paul McEwan; Stephanie Bosak; Manolis Kellis; Jean-Nicolas Volff; Roderic Guigó; Michael C Zody; Jill Mesirov; Kerstin Lindblad-Toh; Bruce Birren; Chad Nusbaum; Daniel Kahn; Marc Robinson-Rechavi; Vincent Laudet; Vincent Schachter; Francis Quétier; William Saurin; Claude Scarpelli; Patrick Wincker; Eric S Lander; Jean Weissenbach; Hugues Roest Crollius
Journal:  Nature       Date:  2004-10-21       Impact factor: 49.962

8.  In vivo enhancer analysis of human conserved non-coding sequences.

Authors:  Len A Pennacchio; Nadav Ahituv; Alan M Moses; Shyam Prabhakar; Marcelo A Nobrega; Malak Shoukry; Simon Minovitsky; Inna Dubchak; Amy Holt; Keith D Lewis; Ingrid Plajzer-Frick; Jennifer Akiyama; Sarah De Val; Veena Afzal; Brian L Black; Olivier Couronne; Michael B Eisen; Axel Visel; Edward M Rubin
Journal:  Nature       Date:  2006-11-05       Impact factor: 49.962

Review 9.  Stages of normal development in the medaka Oryzias latipes.

Authors:  Takashi Iwamatsu
Journal:  Mech Dev       Date:  2004-07       Impact factor: 1.882

10.  Generating chimeric zebrafish embryos by transplantation.

Authors:  Hilary A Kemp; Amanda Carmany-Rampey; Cecilia Moens
Journal:  J Vis Exp       Date:  2009-07-17       Impact factor: 1.355

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  2 in total

1.  Integrated gene mapping and synteny studies give insights into the evolution of a sex proto-chromosome in Solea senegalensis.

Authors:  Silvia Portela-Bens; Manuel Alejandro Merlo; María Esther Rodríguez; Ismael Cross; Manuel Manchado; Nadezda Kosyakova; Thomas Liehr; Laureana Rebordinos
Journal:  Chromosoma       Date:  2016-04-14       Impact factor: 4.316

2.  The Tetraodon nigroviridis reference transcriptome: developmental transition, length retention and microsynteny of long non-coding RNAs in a compact vertebrate genome.

Authors:  Swaraj Basu; Yavor Hadzhiev; Giuseppe Petrosino; Chirag Nepal; Jochen Gehrig; Olivier Armant; Marco Ferg; Uwe Strahle; Remo Sanges; Ferenc Müller
Journal:  Sci Rep       Date:  2016-09-15       Impact factor: 4.379

  2 in total

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