Literature DB >> 25243065

Molecular phylogenetic analysis of bacterial community and characterization of Cr(VI) reducers from the sediments of Tantloi hot spring, India.

Preeti Jain1, Hasan Mahmud Reza2, Subrata Pal3.   

Abstract

BACKGROUND: A geothermal ecosystem located at Tantloi, India has been found to be an interesting habitat for microbes of diverse nature. However, the microbial diversity of this habitat is poorly explored. In this study, a detailed phylogenetic study has been carried out to understand the bacterial diversity of this habitat and to identify prospective metal reducers using culture independent approach. The bacterial diversity of the sediments, which contain undetectable levels of Cr(VI), was analysed with respect to chromium reduction and the strains highly resistant to and efficiently reducing chromium under aerobic conditions were isolated and characterized.
RESULTS: 16S rRNA gene sequence analysis of Tantloi hot spring microbial community revealed a significant bacterial diversity represented by at least ten taxonomic divisions of Bacteria with clear predominance of Thermus. Similar sequence analysis of rRNA gene library clones derived from bacterial consortia enriched from sediments in presence of Cr(VI) revealed the abundance of the family Bacillaceae. Under aerobic conditions at 65°C, the consortia reduced 1 mM of Cr(VI) completely within 24 h and 5 mM in 6 days. A complete reduction of 1 mM Cr(VI) has been shown by five of our isolates within 36 h. 16S rRNA gene sequences of all the isolates showed high degree of similarity (97-99%) to Bacillaceae with ten of them being affiliated to Anoxybacillus. Crude extract as well as the soluble fraction from isolates TSB-1 and TSB-9 readily reduced Cr(VI); TSB-1 showed higher chromium reductase activity.
CONCLUSION: Most of the Tantloi Spring Bacterial (TSB) sequences analyzed in different taxonomic divisions could be related to representatives with known metabolic traits which indicated presence of organisms involved in redox processes of a variety of elements including iron, sulphur and chromium. Approximately 80% of the sequences obtained in this study represented novel phylotypes indicating the possibility of discovery of bacteria with biotechnologically important new biomolecules. Again, highly chromium-resistant and remarkably active Cr(VI)-reducing Anoxybacillus strains isolated in this study could serve as potential candidates for designing chromium bioremediation strategies at high temperatures and also at high chromium concentrations.

Entities:  

Keywords:  Bacterial community; Bioremediation; Chromium reduction; Hot spring; Phylogenetic analysis

Year:  2014        PMID: 25243065      PMCID: PMC4168125          DOI: 10.1186/2046-9063-10-7

Source DB:  PubMed          Journal:  Aquat Biosyst        ISSN: 2046-9063


  29 in total

Review 1.  Merging genomes with geochemistry in hydrothermal ecosystems.

Authors:  Anna-Louise Reysenbach; Everett Shock
Journal:  Science       Date:  2002-05-10       Impact factor: 47.728

Review 2.  Microbial population genomics and ecology.

Authors:  Edward F DeLong
Journal:  Curr Opin Microbiol       Date:  2002-10       Impact factor: 7.934

3.  Links between tree species, symbiotic fungal diversity and ecosystem functioning in simplified tropical ecosystems.

Authors:  Catherine E Lovelock; John J Ewel
Journal:  New Phytol       Date:  2005-07       Impact factor: 10.151

4.  Archaeal diversity in naturally occurring and impacted environments from a tropical region.

Authors:  M M Clementino; C C Fernandes; R P Vieira; A M Cardoso; C R Polycarpo; O B Martins
Journal:  J Appl Microbiol       Date:  2007-07       Impact factor: 3.772

Review 5.  Bacterial interactions with chromate.

Authors:  C Cervantes
Journal:  Antonie Van Leeuwenhoek       Date:  1991-05       Impact factor: 2.271

6.  The oligonucleotide probe database.

Authors:  E W Alm; D B Oerther; N Larsen; D A Stahl; L Raskin
Journal:  Appl Environ Microbiol       Date:  1996-10       Impact factor: 4.792

7.  Induction of Cr(VI) reduction activity in an Anoxybacillus strain under heat stress: a biochemical and proteomic study.

Authors:  Sangita Chowdhury Paul; Preeti Jain; Jyotirmoy Mitra; Sangita Dutta; Pamela Bhattacharya; Bijay Bal; Debasish Bhattacharyya; Sujoy Das Gupta; Subrata Pal
Journal:  FEMS Microbiol Lett       Date:  2012-04-13       Impact factor: 2.742

8.  High diversity in DNA of soil bacteria.

Authors:  V Torsvik; J Goksøyr; F L Daae
Journal:  Appl Environ Microbiol       Date:  1990-03       Impact factor: 4.792

9.  Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli.

Authors:  J Brosius; M L Palmer; P J Kennedy; H F Noller
Journal:  Proc Natl Acad Sci U S A       Date:  1978-10       Impact factor: 11.205

10.  Molecular microbial diversity of an agricultural soil in Wisconsin.

Authors:  J Borneman; P W Skroch; K M O'Sullivan; J A Palus; N G Rumjanek; J L Jansen; J Nienhuis; E W Triplett
Journal:  Appl Environ Microbiol       Date:  1996-06       Impact factor: 4.792

View more
  1 in total

Review 1.  Bacterial diversity in 110 thermal hot springs of Indian Himalayan Region (IHR).

Authors:  Jagdish Verma; Anuradha Sourirajan; Kamal Dev
Journal:  3 Biotech       Date:  2022-08-21       Impact factor: 2.893

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.