Literature DB >> 25240471

Phase-field theories for mathematical modeling of biological membranes.

Guillermo R Lázaro1, Ignacio Pagonabarraga2, Aurora Hernández-Machado3.   

Abstract

Biological membranes are complex structures whose mechanics are usually described at a mesoscopic level, such as the Helfrich bending theory. In this article, we present the phase-field methods, a useful tool for studying complex membrane problems which can be applied to very different phenomena. We start with an overview of the general theory of elasticity, paying special attention to its derivation from a molecular scale. We then study the particular case of membrane elasticity, explicitly obtaining the Helfrich bending energy. Within the framework of this theory, we derive a phase-field model for biological membranes and explore its physical basis and interpretation in terms of membrane elasticity. We finally explain three examples of applications of these methods to membrane related problems. First, the case of vesicle pearling and tubulation, when lipidic vesicles are exposed to the presence of hydrophobic polymers that anchor to the membrane, inducing a shape instability. Finally, we study the behavior of red blood cells while flowing in narrow microchannels, focusing on the importance of membrane elasticity to the cell flow capabilities.
Copyright © 2014 Elsevier Ireland Ltd. All rights reserved.

Entities:  

Keywords:  Biophysics; Membrane; Modelling; Phase-field

Mesh:

Year:  2014        PMID: 25240471     DOI: 10.1016/j.chemphyslip.2014.08.001

Source DB:  PubMed          Journal:  Chem Phys Lipids        ISSN: 0009-3084            Impact factor:   3.329


  5 in total

1.  Elastic and dynamic properties of membrane phase-field models.

Authors:  Guillermo R Lázaro; Ignacio Pagonabarraga; Aurora Hernández-Machado
Journal:  Eur Phys J E Soft Matter       Date:  2017-09-19       Impact factor: 1.890

2.  Mesoscale Liquid Model of Chromatin Recapitulates Nuclear Order of Eukaryotes.

Authors:  Rabia Laghmach; Michele Di Pierro; Davit A Potoyan
Journal:  Biophys J       Date:  2019-09-17       Impact factor: 4.033

3.  Curvature-driven spatial patterns in growing 3D domains: A mechanochemical model for phyllotaxis.

Authors:  Mara D Rueda-Contreras; José R Romero-Arias; José L Aragón; Rafael A Barrio
Journal:  PLoS One       Date:  2018-08-16       Impact factor: 3.240

4.  Microfluidics Approach to the Mechanical Properties of Red Blood Cell Membrane and Their Effect on Blood Rheology.

Authors:  Claudia Trejo-Soto; Guillermo R Lázaro; Ignacio Pagonabarraga; Aurora Hernández-Machado
Journal:  Membranes (Basel)       Date:  2022-02-13

5.  Dynamical shapes of droplets of cyclodextrin-surfactant solutions.

Authors:  J Roberto Romero-Arias; Alberto S Luviano; Miguel Costas; Aurora Hernandez-Machado; Rafael A Barrio
Journal:  Sci Rep       Date:  2022-03-28       Impact factor: 4.379

  5 in total

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