Literature DB >> 25224454

Genome-wide admixture and association study of serum iron, ferritin, transferrin saturation and total iron binding capacity in African Americans.

Jin Li1, Leslie A Lange1, Qing Duan1, Yurong Lu1, Andrew B Singleton2, Alan B Zonderman3, Michele K Evans4, Yun Li5, Herman A Taylor6, Monte S Willis7, Mike Nalls2, James G Wilson8, Ethan M Lange9.   

Abstract

Iron is an essential component of many important proteins and enzymes, including hemoglobin, which is responsible for carrying oxygen to the cells. African Americans (AAs) have a greater prevalence of iron deficiency compared with European Americans. We conducted genome-wide admixture-mapping and association studies for serum iron, serum ferritin, transferrin saturation (SAT) and total iron binding capacity (TIBC) in 2347 AAs participating in the Jackson Heart Study (JHS). Follow-up replication analyses for JHS iron-trait associated SNPs were conducted in 329 AA participants in the Healthy Aging in Neighborhoods of Diversity across the Life Span study (HANDLS). Higher estimated proportions of global African ancestry were significantly associated with lower levels of iron (P = 2.4 × 10(-5)), SAT (P = 0.0019) and TIBC (P = 0.042). We observed significant associations (P < 5 × 10(-8)) between serum TIBC levels and two independent SNPs around TF on chromosome 3, the first report of a genome-wide significant second independent signal in this region, and SNPs near two novel genes: HDGFL1 on chromosome 6 and MAF on chromosome 16. We also observed significant associations between ferritin levels and SNPs near GAB3 on chromosome X. We replicated our two independent associations at TF and our association at GAB3 in HANDLS. Our study provides evidence for both shared and unique genetic risk factors that are associated with iron-related measures in AAs. The top two variants in TF explain 11.2% of the total variation in TIBC levels in AAs after accounting for age, gender, body mass index and background ancestry.
© The Author 2014. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

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Year:  2014        PMID: 25224454      PMCID: PMC4334839          DOI: 10.1093/hmg/ddu454

Source DB:  PubMed          Journal:  Hum Mol Genet        ISSN: 0964-6906            Impact factor:   6.150


  36 in total

1.  Identification of a common variant in the TFR2 gene implicated in the physiological regulation of serum iron levels.

Authors:  Irene Pichler; Cosetta Minelli; Serena Sanna; Toshiko Tanaka; Christine Schwienbacher; Silvia Naitza; Eleonora Porcu; Cristian Pattaro; Fabio Busonero; Alessandra Zanon; Andrea Maschio; Scott A Melville; Maria Grazia Piras; Dan L Longo; Jack Guralnik; Dena Hernandez; Stefania Bandinelli; Elmar Aigner; Anthony T Murphy; Victor Wroblewski; Fabio Marroni; Igor Theurl; Carsten Gnewuch; Eric Schadt; Manfred Mitterer; David Schlessinger; Luigi Ferrucci; Derrick R Witcher; Andrew A Hicks; Günter Weiss; Manuela Uda; Peter P Pramstaller
Journal:  Hum Mol Genet       Date:  2010-12-28       Impact factor: 6.150

2.  Genome-wide association analysis of red blood cell traits in African Americans: the COGENT Network.

Authors:  Zhao Chen; Hua Tang; Rehan Qayyum; Ursula M Schick; Michael A Nalls; Robert Handsaker; Jin Li; Yingchang Lu; Lisa R Yanek; Brendan Keating; Yan Meng; Frank J A van Rooij; Yukinori Okada; Michiaki Kubo; Laura Rasmussen-Torvik; Margaux F Keller; Leslie Lange; Michele Evans; Erwin P Bottinger; Michael D Linderman; Douglas M Ruderfer; Hakon Hakonarson; George Papanicolaou; Alan B Zonderman; Omri Gottesman; Cynthia Thomson; Elad Ziv; Andrew B Singleton; Ruth J F Loos; Patrick M A Sleiman; Santhi Ganesh; Steven McCarroll; Diane M Becker; James G Wilson; Guillaume Lettre; Alexander P Reiner
Journal:  Hum Mol Genet       Date:  2013-02-26       Impact factor: 6.150

3.  MaCH: using sequence and genotype data to estimate haplotypes and unobserved genotypes.

Authors:  Yun Li; Cristen J Willer; Jun Ding; Paul Scheet; Gonçalo R Abecasis
Journal:  Genet Epidemiol       Date:  2010-12       Impact factor: 2.135

4.  Genome-wide association study identifies two loci strongly affecting transferrin glycosylation.

Authors:  Zoltán Kutalik; Beben Benyamin; Sven Bergmann; Vincent Mooser; Gérard Waeber; Grant W Montgomery; Nicholas G Martin; Pamela A F Madden; Andrew C Heath; Jacques S Beckmann; Peter Vollenweider; Pedro Marques-Vidal; John B Whitfield
Journal:  Hum Mol Genet       Date:  2011-06-10       Impact factor: 6.150

5.  Genetic association analysis highlights new loci that modulate hematological trait variation in Caucasians and African Americans.

Authors:  Ken Sin Lo; James G Wilson; Leslie A Lange; Aaron R Folsom; Geneviève Galarneau; Santhi K Ganesh; Struan F A Grant; Brendan J Keating; Steven A McCarroll; Emile R Mohler; Christopher J O'Donnell; Walter Palmas; Weihong Tang; Russell P Tracy; Alexander P Reiner; Guillaume Lettre
Journal:  Hum Genet       Date:  2010-12-12       Impact factor: 4.132

6.  Association of HFE and TMPRSS6 genetic variants with iron and erythrocyte parameters is only in part dependent on serum hepcidin concentrations.

Authors:  Michela Traglia; Domenico Girelli; Ginevra Biino; Natascia Campostrini; Michela Corbella; Cinzia Sala; Corrado Masciullo; Fiammetta Viganò; Iwan Buetti; Giorgio Pistis; Massimiliano Cocca; Clara Camaschella; Daniela Toniolo
Journal:  J Med Genet       Date:  2011-07-23       Impact factor: 6.318

7.  A new glucose-6-phosphate dehydrogenase deficiency variant, G6PD Mizushima, showing increases in serum ferritin and cytosol leucine aminopeptidase levels.

Authors:  Yosuke Suga; Akira Nagita; Rintaro Takesako; Isao Tanaka; Kaichiro Kobayashi; Makoto Hirai; Hiroyuki Matsuoka
Journal:  J Pediatr Hematol Oncol       Date:  2011-01       Impact factor: 1.289

8.  Fast and accurate genotype imputation in genome-wide association studies through pre-phasing.

Authors:  Bryan Howie; Christian Fuchsberger; Matthew Stephens; Jonathan Marchini; Gonçalo R Abecasis
Journal:  Nat Genet       Date:  2012-07-22       Impact factor: 38.330

9.  Domain disruption and mutation of the bZIP transcription factor, MAF, associated with cataract, ocular anterior segment dysgenesis and coloboma.

Authors:  Robyn V Jamieson; Rahat Perveen; Bronwyn Kerr; Martin Carette; Jill Yardley; Elise Heon; M Gabriela Wirth; Veronica van Heyningen; Di Donnai; Francis Munier; Graeme C M Black
Journal:  Hum Mol Genet       Date:  2002-01-01       Impact factor: 6.150

10.  Associations between single nucleotide polymorphisms in iron-related genes and iron status in multiethnic populations.

Authors:  Christine E McLaren; Stela McLachlan; Chad P Garner; Chris D Vulpe; Victor R Gordeuk; John H Eckfeldt; Paul C Adams; Ronald T Acton; Joseph A Murray; Catherine Leiendecker-Foster; Beverly M Snively; Lisa F Barcellos; James D Cook; Gordon D McLaren
Journal:  PLoS One       Date:  2012-06-22       Impact factor: 3.240

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  8 in total

1.  Genome-wide association study of iron traits and relation to diabetes in the Hispanic Community Health Study/Study of Latinos (HCHS/SOL): potential genomic intersection of iron and glucose regulation?

Authors:  Laura M Raffield; Tin Louie; Tamar Sofer; Deepti Jain; Eli Ipp; Kent D Taylor; George J Papanicolaou; Larissa Avilés-Santa; Leslie A Lange; Cathy C Laurie; Matthew P Conomos; Timothy A Thornton; Yii-Der Ida Chen; Qibin Qi; Scott Cotler; Bharat Thyagarajan; Neil Schneiderman; Jerome I Rotter; Alex P Reiner; Henry J Lin
Journal:  Hum Mol Genet       Date:  2017-05-15       Impact factor: 6.150

2.  Genome-wide association study of serum iron phenotypes in premenopausal women of European descent.

Authors:  Daniel L Koller; Erik A Imel; Dongbing Lai; Leah R Padgett; Dena Acton; Amie Gray; Munro Peacock; Michael J Econs; Tatiana Foroud
Journal:  Blood Cells Mol Dis       Date:  2015-12-03       Impact factor: 3.039

3.  Ethnic and genetic factors of iron status in women of reproductive age.

Authors:  Victor R Gordeuk; Patsy M Brannon
Journal:  Am J Clin Nutr       Date:  2017-10-25       Impact factor: 7.045

Review 4.  Ethnic Differences in Iron Status.

Authors:  Wanhui Kang; Alexa Barad; Andrew G Clark; Yiqin Wang; Xu Lin; Zhenglong Gu; Kimberly O O'Brien
Journal:  Adv Nutr       Date:  2021-10-01       Impact factor: 8.701

5.  American Heart Association Cardiovascular Genome-Phenome Study: foundational basis and program.

Authors:  Ivor Benjamin; Nancy Brown; Gregory Burke; Adolfo Correa; Steven R Houser; Daniel W Jones; Joseph Loscalzo; Ramachandran S Vasan; Gayle R Whitman
Journal:  Circulation       Date:  2014-11-19       Impact factor: 29.690

6.  Relationship of Iron Deficiency and Serum Ferritin Levels with Pulmonary Hypertension: The Jackson Heart Study.

Authors:  Matthew Jankowich; Beth Elston; Samuel K Evans; Wen-Chih Wu; Gaurav Choudhary
Journal:  PLoS One       Date:  2016-12-14       Impact factor: 3.240

7.  Differences in the frequency of genetic variants associated with iron imbalance among global populations.

Authors:  Momodou W Jallow; Carla Cerami; Taane G Clark; Andrew M Prentice; Susana Campino
Journal:  PLoS One       Date:  2020-07-01       Impact factor: 3.240

8.  Associations between Common Variants in Iron-Related Genes with Haematological Traits in Populations of African Ancestry.

Authors:  Wanjiku N Gichohi-Wainaina; Toshiko Tanaka; G Wayne Towers; Hans Verhoef; Jacobien Veenemans; Elise F Talsma; Jan Harryvan; Mark V Boekschoten; Edith J Feskens; Alida Melse-Boonstra
Journal:  PLoS One       Date:  2016-06-22       Impact factor: 3.240

  8 in total

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