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Literature DB >> 25210170

Viruses and RNA interference: issues and controversies.

Abstract

The question of whether any mammalian cells are able to mount an effective RNA interference-mediated antiviral innate immune response has remained highly controversial. In this Gem, I review recent data addressing this important issue and propose a testable hypothesis that can explain many of the apparently contradictory results published in this area of research.

Entities: Species

Mesh：

Substances：
RNA, Viral

Year: 2014 PMID： 25210170 PMCID： PMC4249107 DOI： 10.1128/JVI.01179-14

Source DB: PubMed Journal: J Virol ISSN： 0022-538X Impact factor: 5.103

19 in total

1. A species of small antisense RNA in posttranscriptional gene silencing in plants.

Authors: A J Hamilton; D C Baulcombe
Journal: Science Date: 1999-10-29 Impact factor: 47.728

Review 2. RNA interference.

Authors: Gregory J Hannon
Journal: Nature Date: 2002-07-11 Impact factor: 49.962

Review 3. Antiviral immunity directed by small RNAs.

Authors: Shou-Wei Ding; Olivier Voinnet
Journal: Cell Date: 2007-08-10 Impact factor: 41.582

4. Pseudogene-derived small interfering RNAs regulate gene expression in mouse oocytes.

Authors: Oliver H Tam; Alexei A Aravin; Paula Stein; Angelique Girard; Elizabeth P Murchison; Sihem Cheloufi; Emily Hodges; Martin Anger; Ravi Sachidanandam; Richard M Schultz; Gregory J Hannon
Journal: Nature Date: 2008-04-10 Impact factor: 49.962

5. Endogenous siRNAs from naturally formed dsRNAs regulate transcripts in mouse oocytes.

Authors: Toshiaki Watanabe; Yasushi Totoki; Atsushi Toyoda; Masahiro Kaneda; Satomi Kuramochi-Miyagawa; Yayoi Obata; Hatsune Chiba; Yuji Kohara; Tomohiro Kono; Toru Nakano; M Azim Surani; Yoshiyuki Sakaki; Hiroyuki Sasaki
Journal: Nature Date: 2008-04-10 Impact factor: 49.962

6. The Mammalian response to virus infection is independent of small RNA silencing.

Authors: Simone Backes; Ryan A Langlois; Sonja Schmid; Andrew Varble; Jaehee V Shim; David Sachs; Benjamin R tenOever
Journal: Cell Rep Date: 2014-06-19 Impact factor: 9.423

7. Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans.

Authors: A Fire; S Xu; M K Montgomery; S A Kostas; S E Driver; C C Mello
Journal: Nature Date: 1998-02-19 Impact factor: 49.962

8. Human Dicer preferentially cleaves dsRNAs at their termini without a requirement for ATP.

Authors: Haidi Zhang; Fabrice A Kolb; Vincent Brondani; Eric Billy; Witold Filipowicz
Journal: EMBO J Date: 2002-11-01 Impact factor: 11.598

9. Autoinhibition of human dicer by its internal helicase domain.

Authors: Enbo Ma; Ian J MacRae; Jack F Kirsch; Jennifer A Doudna
Journal: J Mol Biol Date: 2008-05-08 Impact factor: 5.469

10. Mouse ES cells express endogenous shRNAs, siRNAs, and other Microprocessor-independent, Dicer-dependent small RNAs.

Authors: Joshua E Babiarz; J Graham Ruby; Yangming Wang; David P Bartel; Robert Blelloch
Journal: Genes Dev Date: 2008-10-15 Impact factor: 11.361

17 in total

Review 1. Antisense RNA: the new favorite in genetic research.

Authors: Jian-Zhong Xu; Jun-Lan Zhang; Wei-Guo Zhang
Journal: J Zhejiang Univ Sci B Date: 2018 Oct. Impact factor: 3.066

2. Ebola Virus Produces Discrete Small Noncoding RNAs Independently of the Host MicroRNA Pathway Which Lack RNA Interference Activity in Bat and Human Cells.

Authors: Abhishek N Prasad; Adam J Ronk; Steven G Widen; Thomas G Wood; Christopher F Basler; Alexander Bukreyev
Journal: J Virol Date: 2020-02-28 Impact factor: 5.103

Review 3. Utilization of different anti-viral mechanisms by mammalian embryonic stem cells and differentiated cells.

Authors: Yan-Lin Guo
Journal: Immunol Cell Biol Date: 2016-08-03 Impact factor: 5.126

4. RNA Exosome Complex Regulates Stability of the Hepatitis B Virus X-mRNA Transcript in a Non-stop-mediated (NSD) RNA Quality Control Mechanism.

Authors: Hussein H Aly; Junya Suzuki; Koichi Watashi; Kazuaki Chayama; Shin-Ichi Hoshino; Makoto Hijikata; Takanobu Kato; Takaji Wakita
Journal: J Biol Chem Date: 2016-06-08 Impact factor: 5.157

5. Yellow Fever Virus, but Not Zika Virus or Dengue Virus, Inhibits T-Cell Receptor-Mediated T-Cell Function by an RNA-Based Mechanism.

Authors: James H McLinden; Nirjal Bhattarai; Jack T Stapleton; Qing Chang; Thomas M Kaufman; Suzanne L Cassel; Fayyaz S Sutterwala; Hillel Haim; Jon C Houtman; Jinhua Xiang
Journal: J Infect Dis Date: 2017-11-27 Impact factor: 5.226

6. piRNAs derived from ancient viral processed pseudogenes as transgenerational sequence-specific immune memory in mammals.

Authors: Nicholas F Parrish; Kan Fujino; Yusuke Shiromoto; Yuka W Iwasaki; Hongseok Ha; Jinchuan Xing; Akiko Makino; Satomi Kuramochi-Miyagawa; Toru Nakano; Haruhiko Siomi; Tomoyuki Honda; Keizo Tomonaga
Journal: RNA Date: 2015-08-17 Impact factor: 4.942

Review 7. Emerging roles for RNA degradation in viral replication and antiviral defense.

Authors: Emma Abernathy; Britt Glaunsinger
Journal: Virology Date: 2015-02-24 Impact factor: 3.616

Review 8. Exaptive origins of regulated mRNA decay in eukaryotes.

Authors: Fursham M Hamid; Eugene V Makeyev
Journal: Bioessays Date: 2016-07-20 Impact factor: 4.345

9. Profound downregulation of neural transcription factor Npas4 and Nr4a family in fetal mice neurons infected with Zika virus.

Authors: Sergio P Alpuche-Lazcano; James Saliba; Vivian V Costa; Gabriel H Campolina-Silva; Fernanda M Marim; Lucas S Ribeiro; Volker Blank; Andrew J Mouland; Mauro M Teixeira; Anne Gatignol
Journal: PLoS Negl Trop Dis Date: 2021-05-28

10. Discovery of Influenza A Virus Sequence Pairs and Their Combinations for Simultaneous Heterosubtypic Targeting that Hedge against Antiviral Resistance.

Authors: Keng Boon Wee; Raphael Tze Chuen Lee; Jing Lin; Zacharias Aloysius Dwi Pramono; Sebastian Maurer-Stroh
Journal: PLoS Comput Biol Date: 2016-01-15 Impact factor: 4.475