Literature DB >> 25201109

Genome-wide activities of RNA binding proteins that regulate cellular changes in the epithelial to mesenchymal transition (EMT).

Thomas W Bebee1, Benjamin W Cieply, Russ P Carstens.   

Abstract

The epithelial to mesenchymal transition (EMT) and reverse mesenchymal to epithelial transition (MET) are developmentally conserved processes that are essential for patterning of developing embryos and organs. The EMT/MET are further utilized in wound healing, but they can also be hijacked by cancer cells to promote tumor progression and metastasis. The molecular pathways governing these processes have historically focused on the transcriptional regulation and networks that control them. Indeed, global profiling of transcriptional changes has provided a wealth of information into how these networks are regulated, the downstream targets, and functional consequence of alterations to the global transcriptome. However, recent evidence has revealed that the posttranscriptional landscape of the cell is also dramatically altered during the EMT/MET and contributes to changes in cell behavior and phenotypes. While studies of this aspect of EMT biology are still in their infancy, recent progress has been achieved by the identification of several RNA binding proteins (RBPs) that regulate splicing, polyadenylation, mRNA stability, and translational control during EMT. This chapter focuses on the global impact of RBPs that regulate mRNA maturation as well as outlines the functional impact of several key posttranscriptional changes during the EMT. The growing evidence of RBP involvement in the cellular transformation during EMT underscores that a coordinated regulation of both transcriptional and posttranscriptional changes is essential for EMT. Furthermore, new discoveries into these events will paint a more detailed picture of the transcriptome during the EMT/MET and provide novel molecular targets for treatment of human diseases.

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Year:  2014        PMID: 25201109     DOI: 10.1007/978-1-4939-1221-6_8

Source DB:  PubMed          Journal:  Adv Exp Med Biol        ISSN: 0065-2598            Impact factor:   2.622


  10 in total

Review 1.  Alternative splicing as a regulator of development and tissue identity.

Authors:  Francisco E Baralle; Jimena Giudice
Journal:  Nat Rev Mol Cell Biol       Date:  2017-05-10       Impact factor: 94.444

2.  Carcinogenic Parasite Secretes Growth Factor That Accelerates Wound Healing and Potentially Promotes Neoplasia.

Authors:  Michael J Smout; Javier Sotillo; Thewarach Laha; Atiroch Papatpremsiri; Gabriel Rinaldi; Rafael N Pimenta; Lai Yue Chan; Michael S Johnson; Lynne Turnbull; Cynthia B Whitchurch; Paul R Giacomin; Corey S Moran; Jonathan Golledge; Norelle Daly; Banchob Sripa; Jason P Mulvenna; Paul J Brindley; Alex Loukas
Journal:  PLoS Pathog       Date:  2015-10-20       Impact factor: 6.823

3.  CELF1 is a central node in post-transcriptional regulatory programmes underlying EMT.

Authors:  Arindam Chaudhury; Shebna Cheema; Joseph M Fachini; Natee Kongchan; Guojun Lu; Lukas M Simon; Tao Wang; Sufeng Mao; Daniel G Rosen; Michael M Ittmann; Susan G Hilsenbeck; Chad A Shaw; Joel R Neilson
Journal:  Nat Commun       Date:  2016-11-21       Impact factor: 14.919

4.  Transcriptomic analyses of RNA-binding proteins reveal eIF3c promotes cell proliferation in hepatocellular carcinoma.

Authors:  Tangjian Li; Shengli Li; Di Chen; Bing Chen; Tao Yu; Fangyu Zhao; Qifeng Wang; Ming Yao; Shenglin Huang; Zhiao Chen; Xianghuo He
Journal:  Cancer Sci       Date:  2017-04-26       Impact factor: 6.716

5.  Identification of protein features encoded by alternative exons using Exon Ontology.

Authors:  Léon-Charles Tranchevent; Fabien Aubé; Louis Dulaurier; Clara Benoit-Pilven; Amandine Rey; Arnaud Poret; Emilie Chautard; Hussein Mortada; François-Olivier Desmet; Fatima Zahra Chakrama; Maira Alejandra Moreno-Garcia; Evelyne Goillot; Stéphane Janczarski; Franck Mortreux; Cyril F Bourgeois; Didier Auboeuf
Journal:  Genome Res       Date:  2017-04-18       Impact factor: 9.043

6.  Dysregulated lncRNA-miRNA-mRNA Network Reveals Patient Survival-Associated Modules and RNA Binding Proteins in Invasive Breast Carcinoma.

Authors:  Yu Dong; Yang Xiao; Qihui Shi; Chunjie Jiang
Journal:  Front Genet       Date:  2020-01-15       Impact factor: 4.599

7.  The global Protein-RNA interaction map of ESRP1 defines a post-transcriptional program that is essential for epithelial cell function.

Authors:  Natoya J Peart; Jae Yeon Hwang; Mathieu Quesnel-Vallières; Matthew J Sears; Yuequin Yang; Peter Stoilov; Yoseph Barash; Juw Won Park; Kristen W Lynch; Russ P Carstens
Journal:  iScience       Date:  2022-09-23

Review 8.  Epithelial-Mesenchymal Transition and Breast Cancer.

Authors:  Yanyuan Wu; Marianna Sarkissyan; Jaydutt V Vadgama
Journal:  J Clin Med       Date:  2016-01-26       Impact factor: 4.241

9.  Ephrin-B1 Is a Novel Biomarker of Bladder Cancer Aggressiveness. Studies in Murine Models and in Human Samples.

Authors:  María Victoria Mencucci; Lara Lapyckyj; Marina Rosso; María José Besso; Denise Belgorosky; Mariana Isola; Silvia Vanzulli; Catalina Lodillinsky; Ana María Eiján; Juan Carlos Tejerizo; Matías Ignacio Gonzalez; María Ercilia Zubieta; Mónica Hebe Vazquez-Levin
Journal:  Front Oncol       Date:  2020-03-27       Impact factor: 6.244

Review 10.  RNA-Binding Proteins as Regulators of Migration, Invasion and Metastasis in Oral Squamous Cell Carcinoma.

Authors:  Jonas Weiße; Julia Rosemann; Vanessa Krauspe; Matthias Kappler; Alexander W Eckert; Monika Haemmerle; Tony Gutschner
Journal:  Int J Mol Sci       Date:  2020-09-17       Impact factor: 5.923

  10 in total

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