Literature DB >> 25192578

An efficient technique for nuclei segmentation based on ellipse descriptor analysis and improved seed detection algorithm.

Hongming Xu, Cheng Lu, Mrinal Mandal.   

Abstract

In this paper, we propose an efficient method for segmenting cell nuclei in the skin histopathological images. The proposed technique consists of four modules. First, it separates the nuclei regions from the background with an adaptive threshold technique. Next, an elliptical descriptor is used to detect the isolated nuclei with elliptical shapes. This descriptor classifies the nuclei regions based on two ellipticity parameters. Nuclei clumps and nuclei with irregular shapes are then localized by an improved seed detection technique based on voting in the eroded nuclei regions. Finally, undivided nuclei regions are segmented by a marked watershed algorithm. Experimental results on 114 different image patches indicate that the proposed technique provides a superior performance in nuclei detection and segmentation.

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Year:  2014        PMID: 25192578     DOI: 10.1109/JBHI.2013.2297030

Source DB:  PubMed          Journal:  IEEE J Biomed Health Inform        ISSN: 2168-2194            Impact factor:   5.772


  15 in total

1.  Convolutional neural network initialized active contour model with adaptive ellipse fitting for nuclear segmentation on breast histopathological images.

Authors:  Jun Xu; Lei Gong; Guanhao Wang; Cheng Lu; Hannah Gilmore; Shaoting Zhang; Anant Madabhushi
Journal:  J Med Imaging (Bellingham)       Date:  2019-02-08

2.  Effective nuclei segmentation with sparse shape prior and dynamic occlusion constraint for glioblastoma pathology images.

Authors:  Pengyue Zhang; Fusheng Wang; George Teodoro; Yanhui Liang; Mousumi Roy; Daniel Brat; Jun Kong
Journal:  J Med Imaging (Bellingham)       Date:  2019-03-14

3.  Automatic cell segmentation in histopathological images via two-staged superpixel-based algorithms.

Authors:  Abdulkadir Albayrak; Gokhan Bilgin
Journal:  Med Biol Eng Comput       Date:  2018-10-16       Impact factor: 2.602

4.  AIIMDs: An Integrated Framework of Automatic Idiopathic Inflammatory Myopathy Diagnosis for Muscle.

Authors:  Manish Sapkota; Fujun Liu; Yuanpu Xie; Hai Su; Fuyong Xing; Lin Yang
Journal:  IEEE J Biomed Health Inform       Date:  2017-04-13       Impact factor: 5.772

5.  Training a cell-level classifier for detecting basal-cell carcinoma by combining human visual attention maps with low-level handcrafted features.

Authors:  Germán Corredor; Jon Whitney; Viviana Arias; Anant Madabhushi; Eduardo Romero
Journal:  J Med Imaging (Bellingham)       Date:  2017-03-11

Review 6.  Robust Nucleus/Cell Detection and Segmentation in Digital Pathology and Microscopy Images: A Comprehensive Review.

Authors:  Fuyong Xing; Lin Yang
Journal:  IEEE Rev Biomed Eng       Date:  2016-01-06

7.  Multi-Instance Multi-Label Learning for Multi-Class Classification of Whole Slide Breast Histopathology Images.

Authors:  Caner Mercan; Selim Aksoy; Ezgi Mercan; Linda G Shapiro; Donald L Weaver; Joann G Elmore
Journal:  IEEE Trans Med Imaging       Date:  2017-10-02       Impact factor: 10.048

8.  Multi-tissue and multi-scale approach for nuclei segmentation in H&E stained images.

Authors:  Massimo Salvi; Filippo Molinari
Journal:  Biomed Eng Online       Date:  2018-06-20       Impact factor: 2.819

9.  Touching Soma Segmentation Based on the Rayburst Sampling Algorithm.

Authors:  Tianyu Hu; Qiufeng Xu; Wei Lv; Qian Liu
Journal:  Neuroinformatics       Date:  2017-10

10.  Multi-Pass Adaptive Voting for Nuclei Detection in Histopathological Images.

Authors:  Cheng Lu; Hongming Xu; Jun Xu; Hannah Gilmore; Mrinal Mandal; Anant Madabhushi
Journal:  Sci Rep       Date:  2016-10-03       Impact factor: 4.379

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