| Literature DB >> 25161875 |
Maximilian A Seiter1, Stefan Salcher2, Martina Rupp2, Judith Hagenbuchner2, Ursula Kiechl-Kohlendorfer3, Jérémie Mortier4, Gerhard Wolber4, Judith M Rollinger5, Petra Obexer2, Michael J Ausserlechner1.
Abstract
Defects in the regulation of apoptosis are one main cause of cancer development and may result from overexpression of anti-apoptotic proteins such as the X-linked inhibitor of apoptosis protein (XIAP). XIAP is frequently overexpressed in human leukemia and prostate and breast tumors. Inhibition of apoptosis by XIAP is mainly coordinated through direct binding to the initiator caspase-9 via its baculovirus-IAP-repeat-3 (BIR3) domain. XIAP inhibits caspases directly making it to an attractive target for anti-cancer therapy. In the search for novel, non-peptidic XIAP inhibitors in this study we focused on the chemical constituents of sāng bái pí (mulberry root bark). Most promising candidates of this plant were tested biochemically in vitro by a fluorescence polarization (FP) assay and in vivo via protein fragment complementation analysis (PCA). We identified the Diels Alder adduct Sanggenon G (SG1) as a novel, small-molecular weight inhibitor of XIAP. As shown by FP and PCA analyses, SG1 binds specifically to the BIR3 domain of XIAP with a binding affinity of 34.26 μM. Treatment of the transgenic leukemia cell line Molt3/XIAP with SG1 enhances caspase-8, -3 and -9 cleavage, displaces caspase-9 from XIAP as determined by immunoprecipitation experiments and sensitizes these cells to etoposide-induced apoptosis. SG1 not only sensitizes the XIAP-overexpressing leukemia cell line Molt3/XIAP to etoposide treatment but also different neuroblastoma cell lines endogenously expressing high XIAP levels. Taken together, Sanggenon G (SG1) is a novel, natural, non-peptidic, small-molecular inhibitor of XIAP that can serve as a starting point to develop a new class of improved XIAP inhibitors.Entities:
Keywords: (FP-) assay, fluorescence polarization assay; ARPF-FAM, ARPF-K(5-Fam)-NH2-peptide; BIR-3, baculovirus-IAP-repeat-3; CC, column chromatography; Cell permeable; Kd, dissociation constant; Ki, binding affinity; MAC, methanol crude extract of mulberry root bark; Natural; PCA, protein fragment complementation analysis; RLU, relative luminescence units; SG1, sanggenon G; Sanggenon G; Small-molecular weight; XIAP inhibitor; XIAP, X-linked inhibitor of apoptosis protein
Year: 2014 PMID: 25161875 PMCID: PMC4141193 DOI: 10.1016/j.fob.2014.07.001
Source DB: PubMed Journal: FEBS Open Bio ISSN: 2211-5463 Impact factor: 2.693
Fig. 1SG1 binds to the BIR3 domain of XIAP in vitro. (A) Screening of mulberry root bark extracts (MAC, MAC-4, SG1–SG7; 0.2 μg/μl) for binding to the ARPF domain of SMAC/DIABLO in vitro by FP-assay. MAC (methanol crude extract); MAC-4 (enriched extract). (B) Chemical structures of isolated constituents from mulberry root bark. (C) Proof of specificity of the BIR3-ARPF interaction by FP-assay. Specific binding of the natural compound SG1 and SG3 (200 μM) to the BIR3 domain of XIAP was analyzed by FP-assay (left panel). An unspecific competitor R18 (2 μM) does not displace the probe AbuRPF-K(5-Fam)-NH2 (FAM-ARPF, 20 nM) from BIR3 protein (720 nM). The specific competitor ARPF (2 μM) displaces the probe almost completely. Shown are means ± s.e.m. of three independent experiments. Statistical analysis was done using Student’s unpaired t-test, ∗∗∗P < 0.01 compared to corresponding control. (D) Proposed binding mode for compounds SG1 (A) and SG3 (B) in XIAP (PDB code 2OPY). Yellow spheres indicate lipophilic areas, red/green arrows hydrogen bonds, and cyan discs cation–π interactions. (For interpretation of the references to color in this figure legend, the reader is referred to the web version of this article.)
Fig. 2SG1 binds to the BIR3 domain of XIAP in vivo. (A) Schematic representation of the biosensor used in the protein fragment complementation assay. The BIR3 domain of XIAP and the AVPI peptide of SMAC/DIABLO are fused to structural fragments of the Renilla-luciferase. If the fragments of the luciferase get in close proximity a functional luciferase is formed and light is emitted under addition of the substrate. If a natural compound is able to compete off the AVPI peptide the light emission is reduced. (B) Biological activity of SG1in vivo is shown by PCA assay. SG1 displaces the AVPI-peptide from the BIR3 domain of XIAP in HEK293T cells thereby reducing luciferase activity. The dissociation of the BIR3-SMAC complex by addition of SG1 (2.9 μM) results in a reduction of the Renilla-luminescence of 44%.SG1 does neither reduce Renilla-luminescence of the control for unspecific protein interactions (REG1 + REG2) nor does it quench the Renilla-luminescence itself. Shown are means ± s.e.m. of three independent experiments. Statistical analysis was done with the Student’s unpaired t-test, ∗P < 0.05 compared to corresponding control. RLU (relative luminescence units). (C) Biological activity of the control substance embelin in vivo is shown by PCA. Embelin (3.4 μM) has a similar effect on XIAP-BIR3-LucF1/AVPI-LucF2-luciferase activity as SG1. Neither the Renilla-luminescence (right panel) nor the controls for unspecific protein interaction (middle panel) were affected by embelin. Shown are means ± s.e.m. of three independent experiments. Statistical analysis was done with the Student’s unpaired t-test, ∗P < 0.05 compared to corresponding control. (D) Biochemical characterization of SG1: Binding isotherm of AbuRPF-K(5-Fam)-NH2 to the XIAP-BIR3 domain. The probe (24.8 nM) was incubated with increasing concentrations of the recombinant XIAP-BIR3 domain (0–15 μM). The Ki-value of SG1 was calculated using the equation of Nikolovska-Coleska (51), based upon the measured IC50-value, the Kd-value of the probe and the XIAP-BIR3 complex, and the concentration of protein and probe in the competition assay (720 nM BIR3, 24.8 nM probe).
Fig. 3Treatment of Molt3/XIAP cells with SG1 enhances caspase activation. (A) Molt3/XIAP cells are more resistant to etoposide-induced apoptosis than Molt3/Ctr cells. Molt3/Ctr and Molt3/XIAP cells were treated with etoposide (100 ng/ml) for 72 h and then subjected to FACS analyses of PI-stained nuclei. Ectopic XIAP expression in Molt3/XIAP cells is shown by immunoblot. GAPDH is used as loading control. (B) Treatment of XIAP overexpressing cells with substance SG1 leads to enhanced caspase-9 activity. Molt3/Ctr and Molt3/XIAP cells were treated with SG1 (14.4 μM) alone and in combination with etoposide (130 nM) for 24 h. Caspase-9 activation was determined by immunoblot. GAPDH served as loading control. The immunoblot was performed three times (independent experiments). Shown is one exemplary figure. (C) Molt3/Ctr and Molt3/XIAP cells were incubated with 130 nM etoposide and 14.4 μM SG1 either alone or in combination for 24 h. Caspase-8 cleavage was then analyzed by immunoblot. GAPDH was used as loading control. The immunoblot was performed three times (independent experiments). Shown is one exemplary figure. (D) Caspase-3 cleavage was analyzed by immunoblot in Molt3/Ctr and Molt3/XIAP cells which were treated with SG1 (14.4 μM) alone and in combination with etoposide (130 nM) for 24 h. α-Tubulin was used as loading control. The immunoblot was performed three times (independent experiments). Shown is one exemplary figure. (E) HEK293T cells were transfected with FLAG-tagged XIAP and treated with etoposide (130 nM), 14.4 μM SG1 or DMSO for 18 h and subjected to co-immunopurification using anti-flag beads. Immunoprecipitates were analyzed for presence of caspase-9 by immunoblot. TP (total protein input), IP (immunoprecipitate), SN (supernatant). Areas containing the expected bands were cropped and assembled to the final figure. This applies for all immunoblots shown here.
Fig. 4Treatment of Molt3/XIAP cells with SG1 inhibits cell growth and enhances etoposide-induced apoptosis in a dose-dependent manner. (A) The compound SG1 inhibits growth of the XIAP-overexpressing cell line Molt3/XIAP in combination with etoposide. Molt3/Ctr and Molt3/XIAP cells were incubated with SG1 (14.4 μM) alone and in combination with etoposide (130 nM) for the indicated time points. Cells were counted with a Casy cell counter (Roche Diagnostics, Mannheim, Germany). Shown are means ± s.e.m. of three independent experiments. Statistical analysis was done with the Student’s unpaired t-test, ∗P < 0.05 compared to corresponding controls. (B) The compound SG1 sensitizes Molt3/XIAP cells to etoposide-induced apoptosis. Molt3/Ctr and Molt3/XIAP cells were treated with SG1 (14.4 μM) alone and in combination with etoposide (130 nM) for 72 h and were then subjected to FACS analyses of PI-stained nuclei. For analysis of apoptotic cells by AnnexinV staining, cells were incubated with 130 nM etoposide and 14.4 μM SG1, either alone or in combination, for 24 h and then analyzed for AnnexinV positive cells. Shown are means ± s.e.m. of three independent experiments. Statistical analysis was done with the Student’s unpaired t-test, ∗P < 0.05 compared to corresponding control. (C) For dose–response curves Molt3/Ctr and Molt3/XIAP cells were treated with increasing concentrations of SG1 (8.2–14.4 μM) alone and in combination with 130 nM etoposide for 24 h. Apoptotic cells were analyzed by AnnexinV staining. Shown are means ± s.e.m. of three independent experiments.
Fig. 5Proof of specificity of SG1 for XIAP in the cIAP1-inhibitor sensitive cell lines OVCAR-4 and HTB-77. (A) The cIAP1-inhibitor sensitive OVCAR-4 and HTB-77 cells were incubated with SG1 (8.5 μM) for 48 h and then subjected to FACS analysis of PI-stained nuclei. Shown are means ± s.e.m. of three independent experiments. Embelin, a known specific XIAP inhibitor, served as control. (B) OVCAR-4 and HTB-77 cells were treated with SG1 (8.5 μM) for 4 h and then subjected to immunoblot analysis of cIAP1 protein levels. The smac mimetics LCL-161 (L) and TL32711 (TL) which both neutralize cIAP1/2 were used as a controls for cIAP1 degradation. GAPDH served as loading control.
Fig. 6Induction of apoptosis by SG1 in neuroblastoma cell lines. (A–C) IMR-32, NxS2 and SH-EP cells were treated with 10 μM SG1 and 250, 750 and 1270 nM etoposide. Apoptosis was determined by flow cytometry of PI stained nuclei after 48 h. Shown are means ± s.e.m. of three independent experiments. For statistical analysis ANOVA with post hoc Bonferroni-analysis was used. A 2-tailed P value ⩽0.05 was considered as significant.