| Literature DB >> 25161576 |
J Josephine Novina1, G Vasuki2, M Suresh3, M Syed Ali Padusha3.
Abstract
In the title hydrated compound, C15H15N3O3·H2O, the nicotinohydrazide mol-ecule adopts a trans conformation with respect to the C=N double bond. The dihedral angle between the benzene and pyridine rings is 5.10 (14)°. In the crystal, the solvent water mol-ecule acts as an acceptor, forming an N-H⋯O hydrogen bond supported by two C-H⋯O contacts. It also acts as a donor, forming bifurcated O-H⋯(O,O) and O-H⋯N hydrogen bonds that combine with the former contacts to form zigzag chains of mol-ecules along the c-axis direction. An additional O-H⋯O donor contact completes a set of six hydrogen bonds to and from the water mol-ecule and connects it to a third nicotinohydrazide mol-ecule. This latter contact combines with weaker C-H⋯O hydrogen bonds supported by a C-H⋯π contact to stack mol-ecules along b in a three-dimensional network.Entities:
Year: 2014 PMID: 25161576 PMCID: PMC4120580 DOI: 10.1107/S1600536814013798
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C15H15N3O3·H2O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 2357 reflections |
| θ = 4.7–51.8° | |
| µ = 0.10 mm−1 | |
| β = 96.513 (4)° | Block, colorless |
| 0.50 × 0.35 × 0.30 mm | |
| Bruker Kappa APEXII CCD diffractometer | 3704 independent reflections |
| Radiation source: fine-focus sealed tube | 2250 reflections with |
| Graphite monochromator | |
| ω and φ scan | θmax = 28.3°, θmin = 3.0° |
| Absorption correction: multi-scan ( | |
| 11633 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3704 reflections | (Δ/σ)max < 0.001 |
| 209 parameters | Δρmax = 0.21 e Å−3 |
| 3 restraints | Δρmin = −0.23 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 1.8728 (4) | 0.00081 (9) | 0.12935 (17) | 0.0591 (6) | |
| H1A | 1.7449 | −0.0075 | 0.0667 | 0.089* | |
| H1B | 1.9736 | −0.0306 | 0.1531 | 0.089* | |
| H1C | 1.9975 | 0.0277 | 0.1101 | 0.089* | |
| C2 | 1.5690 (3) | 0.06393 (7) | 0.19504 (13) | 0.0345 (4) | |
| C3 | 1.4107 (3) | 0.07841 (7) | 0.27937 (13) | 0.0349 (4) | |
| C4 | 1.2439 (3) | 0.12194 (7) | 0.26645 (13) | 0.0360 (4) | |
| H4 | 1.1402 | 0.1315 | 0.3221 | 0.043* | |
| C5 | 1.2269 (3) | 0.15227 (7) | 0.17060 (13) | 0.0343 (4) | |
| C8 | 1.0486 (3) | 0.19839 (7) | 0.15615 (13) | 0.0376 (4) | |
| H8 | 1.0267 | 0.2158 | 0.0889 | 0.045* | |
| C9 | 0.6145 (3) | 0.27874 (7) | 0.28846 (13) | 0.0356 (4) | |
| C10 | 0.4296 (3) | 0.32458 (7) | 0.25774 (13) | 0.0358 (4) | |
| C14 | 0.2785 (4) | 0.34525 (9) | 0.33488 (15) | 0.0512 (5) | |
| H14 | 0.2956 | 0.3293 | 0.4035 | 0.061* | |
| C13 | 0.0882 (4) | 0.40894 (9) | 0.22029 (18) | 0.0574 (6) | |
| H13 | −0.0306 | 0.4376 | 0.2065 | 0.069* | |
| C12 | 0.2313 (5) | 0.39213 (11) | 0.13952 (19) | 0.0764 (8) | |
| H12 | 0.2132 | 0.4093 | 0.0721 | 0.092* | |
| C11 | 0.4038 (5) | 0.34939 (10) | 0.15793 (17) | 0.0704 (7) | |
| H11 | 0.5030 | 0.3373 | 0.1028 | 0.084* | |
| C6 | 1.3787 (3) | 0.13702 (7) | 0.08749 (13) | 0.0396 (4) | |
| H6 | 1.3658 | 0.1564 | 0.0227 | 0.047* | |
| C7 | 1.5492 (3) | 0.09318 (7) | 0.10011 (13) | 0.0388 (4) | |
| H7 | 1.6511 | 0.0834 | 0.0440 | 0.047* | |
| C15 | 1.2265 (4) | 0.05011 (9) | 0.43970 (15) | 0.0578 (6) | |
| H15A | 1.2328 | 0.0847 | 0.4730 | 0.087* | |
| H15C | 1.2545 | 0.0234 | 0.4956 | 0.087* | |
| H15B | 1.0510 | 0.0449 | 0.3982 | 0.087* | |
| N1 | 0.9212 (3) | 0.21555 (6) | 0.23409 (11) | 0.0364 (3) | |
| N2 | 0.7497 (3) | 0.25839 (6) | 0.20898 (10) | 0.0370 (3) | |
| H2N2 | 0.7300 | 0.2717 | 0.1441 | 0.044* | |
| N3 | 0.1091 (4) | 0.38654 (8) | 0.31852 (15) | 0.0637 (5) | |
| O1 | 1.7281 (2) | 0.01981 (5) | 0.21562 (10) | 0.0467 (3) | |
| O1W | 1.1763 (3) | 0.21759 (7) | 0.47728 (11) | 0.0606 (4) | |
| O2 | 1.4351 (3) | 0.04615 (5) | 0.36928 (10) | 0.0496 (4) | |
| O3 | 0.6430 (3) | 0.26124 (6) | 0.38267 (9) | 0.0505 (4) | |
| H1O1 | 1.310 (4) | 0.2231 (12) | 0.440 (2) | 0.101 (10)* | |
| H2O1 | 1.028 (4) | 0.2235 (11) | 0.4360 (19) | 0.102 (10)* |
| C1 | 0.0537 (11) | 0.0579 (14) | 0.0675 (14) | 0.0190 (10) | 0.0148 (10) | −0.0139 (11) |
| C2 | 0.0304 (8) | 0.0321 (9) | 0.0414 (9) | −0.0008 (7) | 0.0062 (6) | −0.0027 (7) |
| C3 | 0.0366 (8) | 0.0365 (10) | 0.0318 (8) | −0.0006 (7) | 0.0052 (6) | 0.0023 (7) |
| C4 | 0.0401 (9) | 0.0401 (10) | 0.0291 (8) | 0.0058 (8) | 0.0094 (6) | −0.0026 (7) |
| C5 | 0.0368 (8) | 0.0356 (10) | 0.0307 (8) | 0.0022 (7) | 0.0038 (6) | −0.0009 (7) |
| C8 | 0.0437 (9) | 0.0406 (10) | 0.0287 (8) | 0.0060 (8) | 0.0049 (7) | 0.0027 (7) |
| C9 | 0.0381 (9) | 0.0392 (10) | 0.0297 (8) | 0.0015 (7) | 0.0052 (6) | 0.0002 (7) |
| C10 | 0.0360 (8) | 0.0383 (10) | 0.0335 (8) | 0.0035 (7) | 0.0060 (6) | −0.0004 (7) |
| C14 | 0.0625 (12) | 0.0551 (13) | 0.0375 (10) | 0.0177 (10) | 0.0117 (8) | 0.0020 (9) |
| C13 | 0.0603 (12) | 0.0493 (13) | 0.0627 (13) | 0.0206 (10) | 0.0075 (10) | 0.0025 (10) |
| C12 | 0.0972 (17) | 0.0813 (18) | 0.0549 (13) | 0.0482 (15) | 0.0267 (12) | 0.0252 (12) |
| C11 | 0.0879 (16) | 0.0809 (18) | 0.0476 (12) | 0.0467 (14) | 0.0305 (11) | 0.0188 (11) |
| C6 | 0.0448 (9) | 0.0441 (11) | 0.0310 (8) | 0.0003 (8) | 0.0094 (7) | 0.0046 (8) |
| C7 | 0.0391 (9) | 0.0432 (11) | 0.0368 (9) | 0.0017 (8) | 0.0152 (7) | −0.0038 (8) |
| C15 | 0.0555 (12) | 0.0773 (16) | 0.0427 (10) | 0.0078 (11) | 0.0142 (9) | 0.0198 (10) |
| N1 | 0.0409 (8) | 0.0367 (9) | 0.0313 (7) | 0.0080 (6) | 0.0023 (6) | 0.0011 (6) |
| N2 | 0.0447 (8) | 0.0388 (9) | 0.0274 (7) | 0.0107 (7) | 0.0038 (6) | 0.0049 (6) |
| N3 | 0.0736 (12) | 0.0635 (13) | 0.0565 (11) | 0.0278 (10) | 0.0180 (9) | −0.0034 (9) |
| O1 | 0.0467 (7) | 0.0415 (8) | 0.0543 (8) | 0.0114 (6) | 0.0159 (6) | 0.0009 (6) |
| O1W | 0.0661 (10) | 0.0840 (12) | 0.0303 (7) | −0.0146 (9) | −0.0007 (7) | 0.0055 (7) |
| O2 | 0.0559 (8) | 0.0533 (9) | 0.0418 (7) | 0.0151 (7) | 0.0153 (6) | 0.0152 (6) |
| O3 | 0.0611 (8) | 0.0611 (9) | 0.0305 (6) | 0.0175 (7) | 0.0106 (5) | 0.0088 (6) |
| C1—O1 | 1.424 (2) | C14—N3 | 1.331 (2) |
| C1—H1A | 0.9600 | C14—H14 | 0.9300 |
| C1—H1B | 0.9600 | C13—N3 | 1.326 (3) |
| C1—H1C | 0.9600 | C13—C12 | 1.348 (3) |
| C2—O1 | 1.364 (2) | C13—H13 | 0.9300 |
| C2—C7 | 1.373 (2) | C12—C11 | 1.371 (3) |
| C2—C3 | 1.412 (2) | C12—H12 | 0.9300 |
| C3—O2 | 1.3652 (19) | C11—H11 | 0.9300 |
| C3—C4 | 1.366 (2) | C6—C7 | 1.382 (2) |
| C4—C5 | 1.398 (2) | C6—H6 | 0.9300 |
| C4—H4 | 0.9300 | C7—H7 | 0.9300 |
| C5—C6 | 1.386 (2) | C15—O2 | 1.418 (2) |
| C5—C8 | 1.452 (2) | C15—H15A | 0.9600 |
| C8—N1 | 1.277 (2) | C15—H15C | 0.9600 |
| C8—H8 | 0.9300 | C15—H15B | 0.9600 |
| C9—O3 | 1.2322 (19) | N1—N2 | 1.3806 (19) |
| C9—N2 | 1.344 (2) | N2—H2N2 | 0.8600 |
| C9—C10 | 1.489 (2) | O1W—H1O1 | 0.856 (17) |
| C10—C11 | 1.370 (3) | O1W—H2O1 | 0.854 (17) |
| C10—C14 | 1.371 (2) | ||
| O1—C1—H1A | 109.5 | N3—C13—C12 | 123.02 (19) |
| O1—C1—H1B | 109.5 | N3—C13—H13 | 118.5 |
| H1A—C1—H1B | 109.5 | C12—C13—H13 | 118.5 |
| O1—C1—H1C | 109.5 | C13—C12—C11 | 119.2 (2) |
| H1A—C1—H1C | 109.5 | C13—C12—H12 | 120.4 |
| H1B—C1—H1C | 109.5 | C11—C12—H12 | 120.4 |
| O1—C2—C7 | 125.21 (15) | C10—C11—C12 | 119.83 (18) |
| O1—C2—C3 | 115.16 (15) | C10—C11—H11 | 120.1 |
| C7—C2—C3 | 119.62 (15) | C12—C11—H11 | 120.1 |
| O2—C3—C4 | 124.52 (14) | C7—C6—C5 | 120.51 (16) |
| O2—C3—C2 | 115.86 (15) | C7—C6—H6 | 119.7 |
| C4—C3—C2 | 119.61 (15) | C5—C6—H6 | 119.7 |
| C3—C4—C5 | 120.85 (15) | C2—C7—C6 | 120.38 (15) |
| C3—C4—H4 | 119.6 | C2—C7—H7 | 119.8 |
| C5—C4—H4 | 119.6 | C6—C7—H7 | 119.8 |
| C6—C5—C4 | 119.01 (16) | O2—C15—H15A | 109.5 |
| C6—C5—C8 | 119.90 (15) | O2—C15—H15C | 109.5 |
| C4—C5—C8 | 121.07 (14) | H15A—C15—H15C | 109.5 |
| N1—C8—C5 | 121.19 (15) | O2—C15—H15B | 109.5 |
| N1—C8—H8 | 119.4 | H15A—C15—H15B | 109.5 |
| C5—C8—H8 | 119.4 | H15C—C15—H15B | 109.5 |
| O3—C9—N2 | 122.34 (16) | C8—N1—N2 | 115.72 (14) |
| O3—C9—C10 | 121.05 (15) | C9—N2—N1 | 118.29 (13) |
| N2—C9—C10 | 116.61 (14) | C9—N2—H2N2 | 120.9 |
| C11—C10—C14 | 116.41 (17) | N1—N2—H2N2 | 120.9 |
| C11—C10—C9 | 124.86 (16) | C13—N3—C14 | 116.83 (17) |
| C14—C10—C9 | 118.70 (15) | C2—O1—C1 | 117.29 (15) |
| N3—C14—C10 | 124.68 (18) | H1O1—O1W—H2O1 | 108 (2) |
| N3—C14—H14 | 117.7 | C3—O2—C15 | 116.70 (13) |
| C10—C14—H14 | 117.7 | ||
| O1—C2—C3—O2 | −0.8 (2) | C9—C10—C11—C12 | −178.5 (2) |
| C7—C2—C3—O2 | 177.74 (15) | C13—C12—C11—C10 | −0.3 (4) |
| O1—C2—C3—C4 | −179.80 (15) | C4—C5—C6—C7 | −1.4 (3) |
| C7—C2—C3—C4 | −1.3 (2) | C8—C5—C6—C7 | −179.96 (16) |
| O2—C3—C4—C5 | −178.69 (15) | O1—C2—C7—C6 | 179.32 (15) |
| C2—C3—C4—C5 | 0.2 (3) | C3—C2—C7—C6 | 1.0 (3) |
| C3—C4—C5—C6 | 1.1 (3) | C5—C6—C7—C2 | 0.4 (3) |
| C3—C4—C5—C8 | 179.61 (15) | C5—C8—N1—N2 | −177.58 (14) |
| C6—C5—C8—N1 | −175.03 (16) | O3—C9—N2—N1 | 1.6 (3) |
| C4—C5—C8—N1 | 6.5 (3) | C10—C9—N2—N1 | −179.42 (14) |
| O3—C9—C10—C11 | 174.1 (2) | C8—N1—N2—C9 | −178.76 (15) |
| N2—C9—C10—C11 | −4.9 (3) | C12—C13—N3—C14 | −0.8 (4) |
| O3—C9—C10—C14 | −3.7 (3) | C10—C14—N3—C13 | −0.3 (3) |
| N2—C9—C10—C14 | 177.30 (17) | C7—C2—O1—C1 | −3.9 (3) |
| C11—C10—C14—N3 | 1.0 (3) | C3—C2—O1—C1 | 174.54 (15) |
| C9—C10—C14—N3 | 178.98 (18) | C4—C3—O2—C15 | 16.5 (3) |
| N3—C13—C12—C11 | 1.1 (4) | C2—C3—O2—C15 | −162.44 (16) |
| C14—C10—C11—C12 | −0.7 (4) |
| H··· | ||||
| N2—H2 | 0.86 | 2.06 | 2.8942 (19) | 165 |
| O1 | 0.85 (2) | 2.15 (2) | 2.955 (2) | 157 (3) |
| O1 | 0.85 (2) | 2.49 (2) | 3.1087 (19) | 130 (2) |
| C11—H11···O1 | 0.93 | 2.30 | 3.199 (3) | 162 |
| C8—H8···O1 | 0.93 | 2.67 | 3.425 (2) | 139 |
| O1 | 0.86 (2) | 2.09 (2) | 2.901 (2) | 159 (3) |
| C1—H1 | 0.96 | 2.88 | 3.729 (3) | 148 |
Hydrogen-bond geometry (Å, °)
Cg2 is the centroid of the C2–C7 benzene ring.
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N2—H2 | 0.86 | 2.06 | 2.8942 (19) | 165 |
| O1 | 0.85 (2) | 2.15 (2) | 2.955 (2) | 157 (3) |
| O1 | 0.85 (2) | 2.49 (2) | 3.1087 (19) | 130 (2) |
| C11—H11⋯O1 | 0.93 | 2.30 | 3.199 (3) | 162 |
| C8—H8⋯O1 | 0.93 | 2.67 | 3.425 (2) | 139 |
| O1 | 0.86 (2) | 2.09 (2) | 2.901 (2) | 159 (3) |
| C1—H1 | 0.96 | 2.88 | 3.729 (3) | 148 |
Symmetry codes: (i) ; (ii) .