We report here a mitochondria-targetable pH-sensitive probe that allows for a quantitative measurement of mitochondrial pH changes, as well as the real-time monitoring of pH-related physiological effects in live cells. This system consists of a piperazine-linked naphthalimide as a fluorescence off-on signaling unit, a cationic triphenylphosphonium group for mitochondrial targeting, and a reactive benzyl chloride subunit for mitochondrial fixation. It operates well in a mitochondrial environment within whole cells and displays a desirable off-on fluorescence response to mitochondrial acidification. Moreover, this probe allows for the monitoring of impaired mitochondria undergoing mitophagic elimination as the result of nutrient starvation. It thus allows for the monitoring of the organelle-specific dynamics associated with the conversion between physiological and pathological states.
We report here a mitochondria-targetable pH-sensitive probe that allows for a quantitative measurement of mitochondrial pH changes, as well as the real-time monitoring of pH-related physiological effects in live cells. This system consists of a piperazine-linked naphthalimide as a fluorescence off-on signaling unit, a cationic triphenylphosphonium group for mitochondrial targeting, and a reactive benzyl chloride subunit for mitochondrial fixation. It operates well in a mitochondrial environment within whole cells and displays a desirable off-on fluorescence response to mitochondrial acidification. Moreover, this probe allows for the monitoring of impaired mitochondria undergoing mitophagic elimination as the result of nutrient starvation. It thus allows for the monitoring of the organelle-specific dynamics associated with the conversion between physiological and pathological states.
Mitochondria play critical
roles in cellular metabolism, including
energy production through the respiratory chain,[1] cell signaling via reactive oxygen species production,[2,3] regulation of Ca2+ homeostasis,[4,5] and
the triggering of cell death.[5,6] The unique function
of mitochondria depends on the mitochondrial pH. For example, under
physiological conditions, mitochondria maintain an alkaline matrix
(pH ∼ 8) reflecting proton extrusion across the inner membrane
via the respiratory electron transport chain.[7,8] This
provides a proton-motive force (ψH+) that serves
to generate ATP via H+-ATP synthase.[2] A breakdown in this normal function leads to the production
of reactive oxygen species (ROS), such as superoxide, hydroxyl radicals,
and hydrogen peroxide, which act as signaling molecules to initiate
apoptosis.[9] The proton-motive force further
acts to regulate Ca2+ homeostasis,[10,11] which in turn modulates dehydrogenase activity associated with the
tricarboxylic acid (TCA) cycle,[12] adenine
nucleotide translocase,[13] and ATP synthase.[14]Not surprisingly, alterations in mitochondrial
baseline pH are
a key feature of abnormal cells. For instance, inhibition of mitochondrial
function typically results in mitochondrial depolarization.[15−17] Mitochondria acidification is also seen during the mitophagic elimination
(mitophagy) of malfunctioning mitochondria through lysosomal fusion.[18,19] Abnormal levels of mitophagy are associated with various pathological
conditions, including cardiovascular diseases,[20] neurodegenerative diseases,[21] Reye’s syndrome,[22] among others.
Thus, being able to probe in greater detail the mitochondrial pH,
particularly changes associated with mitophagy, could provide new
insights into the central features of mitochondrial function under
both physiological and pathological conditions.To the best
of our knowledge, fluorescent chemical probes that
permit the selective monitoring of baseline mitochondrial pH values
and the specific effect of pathogenic events have yet to be reported.
Although classic cytosolic pH probes have been used for mitochondrial
pH measurements,[15,16,23−25] their use requires conditions that restrict their
utility, such as working with isolated mitochondria[20] or permeabilized cells.[15] Biological
systems, including green fluorescent proteins (GFPs) modified with
mitochondrial targeting peptides, have been successfully used in certain
cases to measure mitochondrial pH in intact cells.[7,8,26] However, complications such as improper
protein expression and misfolding into a nonfluorescent state have
been reported.[27] Moreover, in contrast
to genetically encoded probes, small fluorescent probes are expected
to be more readily applicable for use in native cells. This provides
an incentive to develop small molecule probes that would allow mitochondrial
pH levels to be monitored in living cells.In recent years,
a number of fluorescent probes based on naphthalimide
derivatives have been reported, and their potential utility in biological
sensing and imaging established in a variety of contexts.[28] However, to our knowledge naphthalimide derivatives
that can target mitochondria in live cells and allow mitochondrial
pH changes to be monitored directly have not hitherto been reported.Here, we present a new, biocompatible pH-sensitive fluorescent
probe 1 consisting of linked piperazine naphthalimide,
triphenylphosphonium, and benzyl chloride moieties. As illustrated
schematically in Figure 1a, the cationic triphenylphosphonium
subunit[29] was expected to facilitate the
accumulation of probe 1 in mitochondria as the result
of charge considerations resulting from the membrane electrical potential
(Δψm), which makes the inner surface is negative.
In addition, the benzyl chloride functionality was expected to immobilize
probe 1 within the mitochondria as the result of nucleophilic
substitution with reactive thiols present in various mitochondrial
proteins.[30] On the basis of this dual localization
effect, it was predicted that probe 1 would remain in
the mitochondria even after acidification or membrane depolarization.
Finally, the piperazine-based naphthalimide group was expected to
provide a fluorescence “off–on” signal turn on
at acidic pH through protonation-induced inhibition of the photoinduced
electron transfer (PET) that takes place in the neutral form.[31,32]
Figure 1
Proposed
mitochondrion-specific pH sensing mechanism for probe 1 and fluorescent compounds used in this study. (a) As designed,
probe 1 is expected to localize in the mitochondrial
matrix where it will be bound covalently to mitochondrial proteins
through reaction with cysteine thiol residues. The probe is expected
to give rise to a diagnostic fluorescence off–on signal at
525 nm in response to a reduction in the pH. As detailed in the text
proper, this probe effect is ascribed to the quenching of the photoinduced
electron transfer (PET) from the piperazine ring to the naphthalimide
subunit that occurs in the neutral form. (b) Structures of probe 1 and control systems 2, 5, 11, and 13.
Proposed
mitochondrion-specific pH sensing mechanism for probe 1 and fluorescent compounds used in this study. (a) As designed,
probe 1 is expected to localize in the mitochondrial
matrix where it will be bound covalently to mitochondrial proteins
through reaction with cysteine thiol residues. The probe is expected
to give rise to a diagnostic fluorescence off–on signal at
525 nm in response to a reduction in the pH. As detailed in the text
proper, this probe effect is ascribed to the quenching of the photoinduced
electron transfer (PET) from the piperazine ring to the naphthalimide
subunit that occurs in the neutral form. (b) Structures of probe 1 and control systems 2, 5, 11, and 13.
Results and Discussion
Compounds 1, 2, 5, 11, and 13 were prepared
via the synthetic routes
outlined in Figures S1–S4. In this
study, compounds 2 and 5, lacking the benzyl
chloride or triphenylphosphonium unit, were used as control systems
to verify the target specificity and immobilization of 1 to mitochondria in living cells, respectively. Control systems 11 and 13(33) were designed
to demonstrate the proposed PET off–on mechanism of 1. The structures of all new compounds were confirmed by 1H- and 13C NMR spectroscopy, as well as ESI-MS spectrometry
(Figures S21–S46). Full synthetic
procedures are provided in the Supporting Information.As a starting point, we investigated the pH effect on the
fluorescence
behavior of the piperazine-naphthalimide subunit present in probe 1. It was recognized that the benzyl chloride moiety in probe 1 could interfere with the fluorescence response due to its
potential hydrolysis or reaction with other entities present in biological
milieus. Therefore, compound 2, an analogue of 1 lacking the benzyl chloride functionality, was used to probe
the effect of pH. This was done using both UV–vis absorption
and fluorescence emission spectroscopy. As shown in Figure 2a, as the pH decreases from 11 to 2, the absorption
band of 2 gradually shifts from 411 to 391 nm with a
distinct isosbestic point being observed at 409 nm.[31] The fluorescence intensity at 525 nm undergoes a concomitant
monotonic increase (Figure 2b). A quantitative
analysis of the fluorescence intensity at 525 nm vs pH (Figure 2c) revealed a 21-fold (from 143.83 ± 6.56 to
6.99 ± 1.01) increase as the pH range is lowered from 11 to 2.
A plot of fluorescence intensity (FI) vs pH is linear over the pH
range of 5 to 7.5 (R2 = 0.99253). The pKa of 2 was calculated to be 6.18 ± 0.049
(Figure S5). However, in the case of control
compounds 11 and 13, analogues of 1 and 2 that lack the piperazine ring, no fluorescence
changes are seen as a function of variations in the pH (Figures S6 and S7). This supports the contention
that the pH-dependent fluorescence behavior seen in the case of 2, and by extension 1, is due to a PET effect
as suggested in Figure 1a. Suitably designed
probes containing a piperazine-naphthalimide core were thus expected
to produce the desired fluorescence response and to have the sensitivity
needed to follow mitochondrial pH changes, including those accompanying
the conversion from a physiological to a pathological state.
Figure 2
Changes in the optical
features of 2 as a function
of pH. Absorption (a) and fluorescence (b) spectra of 2 (10.0 and 1.0 μM, respectively) recorded at different pH values
(2.0, 3.0, 4.0, 5.0, 6.0, 6.5, 7.0, 7.5, 8.0, 9.0, 10.0, 11.0). (c)
Plot of fluorescence intensity (FI) at 525 nm vs pH. The dots are
based on the average of three separate measurements with the error
bars showing the standard deviation. All data were obtained using
an excitation wavelength of 407 nm in 33 mM buffer solution containing
1% (v/v) DMSO at 37 °C.
The possible interference of other analytes was tested. Toward
this end, the fluorescence spectrum of 2 was recorded
in the absence and presence of various essential metal ions (Na+, K+, Ca2+, etc., as their chloride
salts), as well redox substances associated with oxidative stress,
including metabolic thiols (GSH, Cys, Hcy) and H2O2 under model physiological conditions (PBS solution at pH
7.4, 37 °C). As shown in Figure S8, no noticeable changes were observed in the case of any of these
potential interferants. On this basis, we propose that probe 1 may be used to monitor intracellular pH without interference
from other biologically relevant analytes.Changes in the optical
features of 2 as a function
of pH. Absorption (a) and fluorescence (b) spectra of 2 (10.0 and 1.0 μM, respectively) recorded at different pH values
(2.0, 3.0, 4.0, 5.0, 6.0, 6.5, 7.0, 7.5, 8.0, 9.0, 10.0, 11.0). (c)
Plot of fluorescence intensity (FI) at 525 nm vs pH. The dots are
based on the average of three separate measurements with the error
bars showing the standard deviation. All data were obtained using
an excitation wavelength of 407 nm in 33 mM buffer solution containing
1% (v/v) DMSO at 37 °C.In order to confirm the presumed mitochondrial target specificity
of 1, colocalization experiments involving 1 were performed in HeLa cells using a known mitochondrion-specific
fluorescent probe, MitoTracker Red (MTR). As expected, the fluorescence
image produced using 1 overlaps with that obtained using
MTR (Pearson’s correlation coefficient: 0.87) (Figure 3). Similar findings were found in the case of 2 (Pearson’s correlation coefficient: 0.82) (Figure S9). In contrast, with 5,
a control system lacking the triphenylphosphonium, a poor overlap
between the fluorescence of the test compound and MTR was found (Pearson’s
correlation coefficient: 0.78) (Figure S10).
Figure 3
Colocalization experiments
involving probe 1 and MitoTracker
Red (MTR) in HeLa cells. The cells were incubated with 1 (5.0 μM) for 10 min at 37 °C, and the medium was replaced
with fresh medium containing MTR (5.0 μM) and incubated for
10 min. Images for 1 (a) and MTR (b) were then recorded
using excitation wavelengths of 488 and 633 nm, and band-path emission
filters at 500–550 nm and 700–750 nm, respectively.
Panels (c) and (d) show a merged image of (a) and (b) and the corresponding
bright field image, respectively.
A separate set of control studies were carried out to determine
cell compatibility. It was found that probe 1 displays
negligible cytotoxicity in HeLa cells, as inferred from an MTT assay
(cf. Figure S11).Colocalization experiments
involving probe 1 and MitoTracker
Red (MTR) in HeLa cells. The cells were incubated with 1 (5.0 μM) for 10 min at 37 °C, and the medium was replaced
with fresh medium containing MTR (5.0 μM) and incubated for
10 min. Images for 1 (a) and MTR (b) were then recorded
using excitation wavelengths of 488 and 633 nm, and band-path emission
filters at 500–550 nm and 700–750 nm, respectively.
Panels (c) and (d) show a merged image of (a) and (b) and the corresponding
bright field image, respectively.Immobilization of 1 within the mitochondria
was believed
critical in preventing leakage of the probe from the mitochondria
under conditions of cell depolarization associated with, e.g., a pathogenic
event. To verify immobilization of 1 to the mitochondria
in living cells, confocal microscopic experiments were performed in
the absence and presence of carbonyl cyanide m-chlorophenyl
hydrazone (CCCP). This agent induces an uncoupling of the mitochondrial
membrane potential (Δψm).[34] It can thus be used in the present context to distinguish
between cationic fluorophores that are electrophoretically accumulated
into the mitochondria as the result of a negative inner potential
Δψm and those that are covalently bound and
thus not capable of leaking out once depolarization occurs. In terms
of experiment, HeLa cells were separately pretreated with media containing 1 and 2 (5.0 μM each) for 5 h at 37 °C,
respectively. The media were then replaced with PBS containing CCCP
(10.0 μM) and incubated for 1 and 6 h at 37 °C, respectively.
As can be seen from an inspection of Figure 4a, the fluorescence image produced by 1 is retained
even after 6 h incubation of CCCP. In contrast, the fluorescence image
of 2, a reference, benzyl chloride-free analogue of 1, fades with time when the cellular incubation is carried
out in the presence of CCCP. From this explicit difference, we conclude
that probe 1 is firmly immobilized within the mitochondria
in living cells; presumably, this reflects reaction of the benzyl
chloride with endogenous nucleophiles as implied in Figure 1a.
Figure 4
Analysis of
probe 1 immobilized in mitochondria of
HeLa cells. (a) The effect of CCCP, a recognized mitochondrial uncoupler,
on the fluorescence confocal images of compounds 1 and 2 in HeLa cells. The lower images represent the corresponding
bright field images. (b) 2D-gel of proteins collected from cells incubated
with 1 for 5 h at 37 °C. The dotted lines define
areas of Typhoon and CBB (coomassie brilliant blue) staining. These
images were pseudocolored with green and red, respectively, and merged.
Bands corresponding to fluorescent 1-fixed proteins are
shown with arrows. Typhoon images showing fluorescent bands were obtained
using an excitation wavelength of 457 nm. All bands were visualized
by CBB staining.
Fluorescent proteins, containing one or
more equivalents of the
covalently bound form of 1, produced as the result of
this immobilization process were monitored by 2D-gel experiments.
Figure 4b shows the fluorescent (Typhoon; for
the fluorescence spots) and CBB (coomassie brilliant blue; for the
protein spots) staining images of a 2D-gel used to visualize the proteins
produced after incubation with 1. A distinct fluorescent
spot was seen on the gel when visualized at around pH 5. This spot
is retained in the merged pseudocolored Typhoon (green) and CBB (red)
staining images. Moreover, several proteins covalently linked to probe 1 were isolated from the gel and analyzed by ESI-MS spectroscopy.
The peptide sequences of ATP synthase subunit beta (56 kDa)[35] and heat shock (60 kDa)[36] mitochondrial proteins were clearly observed (Tables S1 and S2). However, in the case of untreated cells
and those incubated with the reference compound 2, no
fluorescence proteins were observable on the gel (Figure S12). In conjunction with the data presented in Figures 3 and 4, this control study
leads us to conclude that probe 1 is selectively immobilized
within the mitochondria via covalent attachment in accord with the
design expectations (Figure 1a).Analysis of
probe 1 immobilized in mitochondria of
HeLa cells. (a) The effect of CCCP, a recognized mitochondrial uncoupler,
on the fluorescence confocal images of compounds 1 and 2 in HeLa cells. The lower images represent the corresponding
bright field images. (b) 2D-gel of proteins collected from cells incubated
with 1 for 5 h at 37 °C. The dotted lines define
areas of Typhoon and CBB (coomassie brilliant blue) staining. These
images were pseudocolored with green and red, respectively, and merged.
Bands corresponding to fluorescent 1-fixed proteins are
shown with arrows. Typhoon images showing fluorescent bands were obtained
using an excitation wavelength of 457 nm. All bands were visualized
by CBB staining.The fluorescence response
of 1 to changes in pH in
HeLa cells was tested using confocal microscopy (cf. Figure S13). For this experiment, the cells were labeled with 1. The intracellular pH was then set at values between 4 and
7 using various buffer solutions in the presence of known H+/K+ ionophores (nigericin and monensin). The fluorescence
intensity of 1 gradually increases as the cellular pH
is lowered from 7 to 4. These finding match what was seen when 1 was tested in solution (see Figure 2 and accompanying discussion). The off–on manner of the fluorescent
response seen upon lowering the pH leads us to suggest that probe 1 can be used to image mitochondrial pH changes associated
with pathogenic states in live cells.As a predicate to testing
the above suggestion, an effort was made
to quantify the mitochondrial pH in HeLa cells using 1 in conjunction with MitoTracker Red (MTR). It is well-known that
ratiometric comparisons of two separate emission bands facilitates
accurate and quantitative measurements when using fluorescent chemosensors.[37,38] To see if such an approach had merit in the present instance, several
preliminary experiments were carried out. First, we tested the effect
of pH on the fluorescence emission properties of MTR. The MTR fluorescence
at 634 nm is invariant over the 5–8 pH range (Figure S14) However, upon subjecting the cells to laser irradiation
8 time in sequence an approximately ca. 13% decrease in the effective
MTR fluorescence intensity was seen (as judged by confocal microscopy)
(Figure S15). This effect is ascribed to
photobleaching of the MTR dye in the HeLa cells. Such photobleaching
was not seen in the case of 1. Upon excitation at 488
nm, confocal fluorescence images were obtained that revealed emission
from both 1 and MTR that had its origin in both cases
in the mitochondria of HeLa cells (Figure S16). This is taken as evidence of colocalization. On the other hand,
when 1 was irradiated selectively by means of two-photon
excitation at 750 nm, only a weak image ascribable to MTR was observed.
We thus rule out FRET as an important deactivation mechanism (Figure S16). Taken in concert, these studies
lead us to conclude that coincubating cells with both 1 and MTR will provide a reliable means of monitoring mitochondrial
pH via ratiometric fluorescence studies, provided account is taken
of the photobleaching that can occur in the case of MTR.To
establish a valid intracellular pH calibration profile, HeLa
cells were coincubated with probe 1 and MTR. The cells
were then fixed and exposed to buffer solutions at different pH. As
shown in Figure 5a, the fluorescence intensity
of 1 (first row, Igreen)
in cells gradually increases with decreasing pH over the 8–5
pH range, whereas that for MTR (second row, Ired) remains essentially unchanged. The merged images (third
row) serve to confirm the colocalization of 1 and MTR
within the mitochondria. Moreover, pseudocolored images, reflecting
the ratio of the green (Igreen) and red
(Ired) emission intensities ascribed to 1 and MTR, respectively, help underscore the fact that the
probe 1 gives rise to pH-dependent signals and does so
with a linear response over the 4–8 pH range (Figure 5b).
Figure 5
Mitochondrial pH determination in HeLa cells using probe 1 and MitoTracker Red. (a) Confocal microscopy images of 1 (5.0 μM) and MitoTracker Red (MTR) (0.1 μM)
in fixed cells exposed to external media fixed at pH 5, 6, 7, and
8, respectively. (b) Intracellular pH calibration curve constructed
by plotting Igreen/Ired vs pH. The dots are based on the average with the indicated
standard error. The table provides the average pH values of the mitochondria
in intact and nutrient-deprived cells. (c) Images of 1 and MTR in intact cells. Four regions of interest (ROI) are indicated
in the merged image. The table lists the average pH values for the
pseudo red–green color (ROI 1 and ROI 3) and the blue–purple
color (ROI 2 and ROI 4) regions. The color strip indicates the pseudo
color change observed upon varying the pH. All images were recorded
using an excitation wavelength of 488 nm, and band-path emission filters
at 500–550 nm and 680–750 nm.
Mitochondrial pH determination in HeLa cells using probe 1 and MitoTracker Red. (a) Confocal microscopy images of 1 (5.0 μM) and MitoTracker Red (MTR) (0.1 μM)
in fixed cells exposed to external media fixed at pH 5, 6, 7, and
8, respectively. (b) Intracellular pH calibration curve constructed
by plotting Igreen/Ired vs pH. The dots are based on the average with the indicated
standard error. The table provides the average pH values of the mitochondria
in intact and nutrient-deprived cells. (c) Images of 1 and MTR in intact cells. Four regions of interest (ROI) are indicated
in the merged image. The table lists the average pH values for the
pseudo red–green color (ROI 1 and ROI 3) and the blue–purple
color (ROI 2 and ROI 4) regions. The color strip indicates the pseudo
color change observed upon varying the pH. All images were recorded
using an excitation wavelength of 488 nm, and band-path emission filters
at 500–550 nm and 680–750 nm.The mitochondrial pH of intact HeLa cells were then measured
based
on the calibration curve produced from the fixed pH experiments described
above (Figure 5b). Merged and pseudocolored
images of probe 1 and MTR obtained from live cells are
displayed in Figure 5c. On the basis of the
ratio of fluorescence intensities corresponding to 1 and
MTR, the average pH value of the mitochondria in HeLa cells was determined
to be 7.99 ± 0.49 (n = 5 cells). This mitochondrial
pH is similar to the earlier studies (Pozzan, pH = 8.05; Tsien, pH
= 7.98; both in HeLa cells).[7,8]In living cells,
mitochondria are expected to be heterogeneous
in terms of their pH values as the result of their functional heterogeneity.[7,39] Since distinct mitochondrial subsets may vary in their sensitivity
to pathogens, resistance to apoptosis, response to oxidative stress,
susceptibility to reactive oxygen species (ROS), or changes in Ca2+ ion fluxes, an ability to recognize heterogeneous pH values
would be beneficial.The relatively large standard deviations
seen in the initial studies
discussed above led us to consider that pH heterogeneity could be
monitored with our probe system. Toward this end, four regions of
interest (ROI) were chosen in the merged cell images. Regions ROI
1 and ROI 3 were characterized by an enhanced green fluorescence ascribed
to 1. In contrast, ROI 2 and ROI 4 displayed relatively
low fluorescence intensities. On the basis of these intensity values,
the average pH of ROI 1 and ROI 3 and of ROI 2 and ROI 4 were estimated
to be 4.63 and 8.05, respectively (see Figure 5b and 5c). These findings support the contention
that the present probe can be used to identify mitochondrial heterogeneity.To test whether probe 1 could be used to identify
mitochondrial damage associated with dysfunction and cell death, a
starvation model was employed. Nutrient deprivation impairs mitochondria
through metabolic inhibition. This leads to mitochondrial acidification,
which in turn is correlated with an increase in mitophagy levels.[18,40] HeLa cells were thus coincubated with probe 1 and MTR
in a serum-free medium. Fluorescence intensity ratios were then acquired
via confocal microscopy. Using the calibration curve shown in Figure 5b, the average mitochondria pH of HeLa cells observed
upon nutrient deprivation was determined to be 4.87 ± 0.35 (n = 8 cells) (see also Figure S17). The observation of mitochondrial acidification under these conditions
is fully consistent with previous reports in the literature,[18−20] namely, that cells subjected to nutrient deprivation possess mitochondria
characterized by lower pH than those present in intact cells.The above results led us to propose that probe 1 could
also have utility in the real-time monitoring of pH changes during
mitophagy, a process induced inter alia by nutrient depravation as
noted above. During mitophagy, the impaired mitochondria are entrapped
in acidic autolysosomes. This results first in mitochondrial acidification
followed by degradation.[15,16,18,19] To test whether probe 1 could be used to monitor mitophagy, HeLa cells were treated with
both 1 and LysoTracker Red (LTR) in a serum-free medium
containing pepstatin A. Probe 1 and LTR were expected
to allow for a visual monitoring of mitochondrial pH and acidic autolysosomes,
respectively. Pepstatin A is a protease inhibitor and was used to
delay mitochondrial degradation by proteases in the autolysosomes.As can be seen from Figure 6a, the fluorescence
intensity of 1 in nutrient-deprived cells is greater
than in intact cells. In addition, the fluorescence of 1 predominantly overlaps with that of LTR in nutrient-deprived cells.
In contrast, in intact cells instances of such overlap are rare.
Figure 6
Real-time
monitoring of mitochondrial pH changes and lysosome fusion
in intact and nutrient-deprived HeLa cells. (a) Confocal microscopy
images of HeLa cells treated with probe 1 (5.0 μM)
and LysoTracker Red (LTR) (1.0 μM) in growth medium (for intact
cells) or in serum-free KRH (Krebs-Ringer-HEPES) buffer containing
pepstatin A (7.5 μM) (for nutrient-deprived cells). Time course
images of intact (b) and nutrient-deprived cells (c). The images were
recorded at time points consisting of t = 0, 90,
180, 270, and 360 s. All images were recorded using an excitation
wavelength of 488 nm and band-path emission filters at 510–550
nm and 570–660 nm.
Real-time
monitoring of mitochondrial pH changes and lysosome fusion
in intact and nutrient-deprived HeLa cells. (a) Confocal microscopy
images of HeLa cells treated with probe 1 (5.0 μM)
and LysoTracker Red (LTR) (1.0 μM) in growth medium (for intact
cells) or in serum-free KRH (Krebs-Ringer-HEPES) buffer containing
pepstatin A (7.5 μM) (for nutrient-deprived cells). Time course
images of intact (b) and nutrient-deprived cells (c). The images were
recorded at time points consisting of t = 0, 90,
180, 270, and 360 s. All images were recorded using an excitation
wavelength of 488 nm and band-path emission filters at 510–550
nm and 570–660 nm.We also monitored the changes in the fluorescent images of 1 and LTR at 15 s intervals over a 435 s time period. The
results of this monitoring appear in Figure 6b and 6c and in the Supporting
Information (cf. Supplementary Movie 1 and Figure S18 for intact cells; cf. Supplementary Movie 2 and Figures S19 and S20 for nutrient-deprived cells). Figure 6c shows fluorescent images of nutrient-deprived
cells recorded at 90, 180, 270, and 360 s, respectively. Enlarged
images are shown in Figure S20. The fluorescence
intensity ascribed to 1 gradually increases while overlapping
with that of LTR. Pearson’s correlation coefficient increases
from 0.85 to 0.91. However, in the case of intact cells in growth
medium, these time-dependent changes are not observed (Figure 6b). Pearson’s correlation also shows a little
change (i.e., going from 0.87 to 0.84). Therefore, we conclude that
probe 1 allows for the quantitative measurement of pH
changes in mitochondria, as well as the real-time monitoring of mitophagy
in living cells. The ability to study mitochondrial pH dynamics leads
us to suggest that in due course probe 1 or its analogues
could find use as potential diagnostic tools for mitochondria-related
diseases.
Conclusions
Mitochondrial pH is a potential indicator
of both normal physiology
and cellular pathology. A significant current bottleneck in exploiting
mitochondrial pH as a marker of cell status is an absence of probes
that allow for the direct and reliable measurement of mitochondrial
pH measurement in whole cells. In this study, we have successfully
developed a chemical strategy that permits the selective and effective
determination of mitochondrial pH. We have shown that the system in
question, probe 1, permits the real time monitoring of
pH changes associated with the mitochondrial acidification and fusion
that occurs during mitophagy resulting from nutrient deprivation.
The success of our probe is ascribed to the fact that it contains
a piperazine-based naphthalimide as a PET driven fluorophore, a triphenylphosphonium
group for mitochondria targeting, and a reactive benzyl chloride subunit
that induces mitochondrial fixation. We therefore envision that in
due course this strategy will contribute to improvements in diagnostics
and testing wherein mitochondrial pH dynamics are monitored as a means
of distinguishing between physiological and pathological states or
screening potential new mitochondria-targeting drugs.
Experimental Section
Synthetic Materials and Methods
All reagents, including
metal ions, thiols, H2O2, and other chemicals
for synthesis, buffer solution preparation, and cell imaging, were
purchased from Aldrich or TCI and used as received. All solvents were
HPLC reagent grade, and deionized water was used throughout the analytical
experiments. Silica gel 60 (Sorbent, 40–63 mm) was used for
column chromatography. Analytical thin layer chromatography was performed
using Silicycle 60 F254 silica gel (precoated sheets, 0.25 mm thick). 1H and 13C NMR spectra were collected in CDCl3 (Cambridge Isotope Laboratories, Cambridge, MA) on Varian
400 MHz spectrometers.
UV–Vis Absorption and Fluorescence
Spectroscopy
Stock solutions of 1, 2, 11, and 13 were prepared in DMSO. The
biologically relevant
analytes, including chloride salts of metal ions (Na+,
K+, Ca2+, Zn2+, Mg2+,
Mn2+, Cu2+, Fe2+, Fe3+), thiols (GSH, Cys, Hcy), and H2O2, were prepared
in triple-distilled water. pH buffer solutions of differing pH were
prepared using 33 mM of potassium hydrogen phthalate (for pH 2–5),
potassium dihydrogen phosphate (for pH 6–8), sodium tetraborate
(for pH 9–10), and sodium bicarbonate (for pH 11). The actual
pH was set by adding aliquots of 0.1 M NaOH or 0.1 M HCl to the initial
buffer solutions. Absorption spectra were recorded on a Varian-5000
UV–vis–NIR spectrophotometer, and fluorescence spectra
were recorded using a FL3–11T spectrofluorometer (Nanolog)
equipped with a xenon lamp (FL 1039). Samples for absorption and emission
measurements were contained in quartz cuvettes (3 mL volume). Excitation
was effected at 407 (for 2), 450 (for 11), and 434 nm (for 13), with the excitation and emission
slit widths both set at 5 nm.
Cell Culture and Imaging
A human cervical cancer cell
line (HeLa) was cultured in Dulbecco’s modified Eagle’s
medium (DMEM) supplemented with 10% FBS (WelGene), penicillin (100
units/mL), and streptomycin (100 μg/mL). Two days before imaging,
the cells were passed and plated on glass-bottomed dishes (MatTek).
All the cells were maintained at 37 °C in a humidified atmosphere
consisting of 5/95 (v/v) CO2/air. For labeling, the growth
medium was removed and replaced with DMEM without FBS. The cells were
treated and incubated with 5.0 μM of 1 at 37 °C
under 5% CO2 for the specific incubation time associated
with a given experiment. The cells were washed three times with phosphate
buffered saline (PBS, Gibco). Cell images were then recorded using
a confocal microscope (Leica, model TCS SP2). Other information is
available in the figure captions.
Authors: Min Hee Lee; Ji Hye Han; Pil-Seung Kwon; Sankarprasad Bhuniya; Jin Young Kim; Jonathan L Sessler; Chulhun Kang; Jong Seung Kim Journal: J Am Chem Soc Date: 2012-01-03 Impact factor: 15.419
Authors: Swagata Banerjee; Emma B Veale; Caroline M Phelan; Samantha A Murphy; Gillian M Tocci; Lisa J Gillespie; Daniel O Frimannsson; John M Kelly; Thorfinnur Gunnlaugsson Journal: Chem Soc Rev Date: 2013-01-17 Impact factor: 54.564
Authors: Shuai Xia; Jianbo Wang; Yibin Zhang; Nick Whisman; Jianheng Bi; Tessa E Steenwinkel; Shulin Wan; Jerry Medford; Momoko Tajiri; Rudy L Luck; Thomas Werner; Haiying Liu Journal: J Mater Chem B Date: 2020-02-26 Impact factor: 6.331
Authors: Austin E Y T Lefebvre; Dennis Ma; Kai Kessenbrock; Devon A Lawson; Michelle A Digman Journal: Nat Methods Date: 2021-08-19 Impact factor: 28.547