| Literature DB >> 25157947 |
Jason A Miranda1, Phil Stanley2, Katrina Gore2, Jamie Turner1, Rebecca Dias1, Huw Rees1.
Abstract
Sensory processing in the spinal cord during disease states can reveal mechanisms for novel treatments, yet very little is known about pain processing at this level in the most commonly used animal models of articular pain. Here we report a test of the prediction that two clinically effective compounds, naproxen (an NSAID) and oxycodone (an opiate), are efficacious in reducing the response of spinal dorsal horn neurons to noxious knee joint rotation in the monosodium iodoacetate (MIA) sensitized rat. The overall objective for these experiments was to develop a high quality in vivo electrophysiology assay to confidently test novel compounds for efficacy against pain. Given the recent calls for improved preclinical experimental quality we also developed and implemented an Assay Capability Tool to determine the quality of our assay and ensure the quality of our results. Spinal dorsal horn neurons receiving input from the hind limb knee joint were recorded in anesthetized rats 14 days after they were sensitized with 1 mg of MIA. Intravenous administered oxycodone and naproxen were each tested separately for their effects on phasic, tonic, ongoing and afterdischarge action potential counts in response to innocuous and noxious knee joint rotation. Oxycodone reduced tonic spike counts more than the other measures, doing so by up to 85%. Tonic counts were therefore designated the primary endpoint when testing naproxen which reduced counts by up to 81%. Both reductions occurred at doses consistent with clinically effective doses for osteoarthritis. These results demonstrate that clinically effective doses of standard treatments for osteoarthritis reduce pain processing measured at the level of the spinal cord for two different mechanisms. The Assay Capability Tool helped to guide experimental design leading to a high quality and robust preclinical assay to use in discovering novel treatments for pain.Entities:
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Year: 2014 PMID: 25157947 PMCID: PMC4144976 DOI: 10.1371/journal.pone.0106108
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Figure 1Experimental timelines.
(A) MIA Sensitization timeline with recording on a single day between 14–17 days post injection (B) Protocol on the day of recording. Black arrows denote time points at which dried blood spot samples were taken for drug exposure measurement.
Assay Capability Tool.
| Question to consider: | Why it is important: | ||
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| Q1: Are the scientific objectives forrunning the assay recorded in aprotocol/SOP? | The scientific questions to be answered, the measurements to be obtained and analyzed along with their required precision (as defined by, for example, a standard error or confidence limits) must be stated in the protocol/SOP to prevent data dredging and misinterpretation of the results. | ||
| Q2: What will a successful assayoutcome look like in order to guidedecision making? | Pre-specifying decision criteria leads to clear decisions and ensures unbiased interpretation of results. A target value should be stated for the primary endpoint. Since all assay results include inherent uncertainty, pre-defining what a successful outcome will look like requires a pre-specified level of uncertainty that can be tolerated for acceptable decision making. | ||
| Q3: Is the experimental design, asdescribed in the protocol/SOP, alignedclosely with the objectives? | Is the experimental design and conduct capable of achieving results that meet the objectives? The design and conduct should be revisited in light of current/changing objectives. Once the objectives and definitions of success are defined, consultation with a statistician is essential to ensure the assay is appropriate. | ||
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| Q4: Are the assay’s development andvalidation fully documented? | What work has been done in order to verify that an assay is fit for purpose? The answer should identify key lessons/issues/concerns arising from experiments done while the assay was being developed. Assay developers should document validation runs using positive and negative controls and tool compounds to provide benchmarks and reassurance to the users of the resulting data. | ||
| Q5: Have the sources of variabilitypresent in the assay been explored? | All assays exhibit variability and it is important to know what the sources of variability are and their relative sizes. The major sources of variation and the statistical methods that will be used for their control should be summarized in the assay protocol. Understanding and controlling sources of variability in an assay are critical to achieving required precision as captured in the standard errors and confidence intervals for key endpoints. | ||
| Q6: Is the proposed sample size/levelof replication fit for purpose? | An assay that enables a clear decision requires sufficient, but not excessive, precision. Sample size should always be based on what is known about the assay’s variability in the laboratory where it will be run and the quantitative definition of what a successful assay outcome will look like. Relying on historical precedent or published values should not be the default strategy. | ||
| Q7: Is there a comprehensive protocol/SOP detailing study objectives, keyendpoints, experimental design, methodsof analysis and a timetable of activities? | A comprehensive assay protocol supports efficient decisions by specifying the methods to be used to control variation (e.g. randomization, blocking, use of covariates and blinding). It helps to ensure uniformity in assay execution resulting in assay results that are reproducible and comparable from one run to another. It promotes transparency by documenting the actual conditions of the assay. This helps decision makers interpret the results. | ||
| Q8: How is assay performance monitoredover time? What is the plan for reactingto signs of instability? | Repeated assay use should be tracked to detect changing conditions that may affect the interpretation of results and to understand the natural variability of the assay. Quality control (QC) charts are available to monitor the assay consistency of controls, standard or tool compounds over time. Ongoing monitoring is necessary to understand any changes and their implications for interpreting the results and to trigger remediation when necessary. | ||
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| Q9: Are inclusion/exclusion criteria for theassay specified in the protocol/SOP? | Criteria for the inclusion/exclusion of animals, cells, etc. in an assay should be pre-defined and clearly stated in the protocol/SOP. This ensures all the appropriate data are collected and eliminates selection bias. | ||
| Q10: Is the management of subjectivity indata collection and reporting definedin the protocol/SOP? | There is a need to ensure, through the use of randomization and blinding, that the scientist remains unaware of the treatment that the animal has received. Even when the assay measurement is obtained automatically without human intervention there is possibility for bias, and randomization is essential and blinding is highly recommended. Studies of a long duration should be done in blocks to ensure that no bias is introduced by changing conditions over time. | ||
| Q11: If the raw data are processed (e.g. bysummarization or normalization) prior toanalysis, is the method for doing thisspecified in the study protocol/SOP? | Methods of processing raw data prior to statistical analysis should be clearly stated in the assay protocol/SOP. For example, is it the raw response data, change from baseline or log transformed data that are to be analyzed; or are the raw data summarized into an area under the curve or average? This ensures that assay methods and results can be reproduced and validated. | ||
| Q12: Are rules for treating data as outliersin the analysis specified in theprotocol/SOP? | Rules for treating data as outliers should be clearly stated in the assay protocol/SOP. Rules should be in place for the removal of individual data points, whole animals and dose groups as required. This ensures all the appropriate data are analyzed and eliminates selection bias. | ||
| Q13: Is the analysis specified in thestudy protocol/SOP? Is it fit forpurpose? | The statistical analysis must reflect the study design and assay objectives. Inappropriate analyses can result in misleading conclusions and a false sense of precision. The analysis must incorporate the structure of the data and consultation with a statistician is essential to model the experimental structure appropriately. | ||
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| Confidence for decision making | Low/Medium/High | Low/Medium/High | Low/Medium/High |
| Assay Capability Tool Summary | Summarize the evidence for an overall confidence rating in this assay for a given experiment | ||
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| Target value | Required effect size for decision making | ||
| Required precision | Depends on the identified acceptable level of risk for a given project | ||
| Required replication | Based on a sample size calculation using data from previous experiments or a pilot study | ||
Assay Capability Tool applied to the joint rotation assay.
| Question: | Response | ||
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| Q1: Are the scientific objectives for running theassay recorded in a protocol/SOP? | See the Introduction section | ||
| Q2: What will a successful assay outcome look likein order to guide decision making? | For the naproxen experiment, an effect size comparable to oxycodone was set as a criteria for success | ||
| Q3: Is the experimental design, as described in theprotocol/SOP, aligned closely with the objectives? | Experiment one, testing oxycodone, was designed as an exploratory test to determine what endpoints are appropriate and what effect size should be expected. Experiment two used the selected primary endpoint to test a different mechanism against the oxycodone benchmark. | ||
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| Q4: Are the assay’s development and validationfully documented? | Oxycodone effects are reported for exploratory endpoints along with rationale for the primary endpoint selection | ||
| Q5: Have the sources of variability present in theassay been explored? | Variability in baseline responses is high across cells and potentially high across experimental groups. | ||
| Q6: Is the proposed sample size/level of replicationfit for purpose? | Sample size calculation for naproxen is based on an effect size comparable to oxycodone effects | ||
| Q7: Is there a comprehensive protocol/SOP detailingstudy objectives, key endpoints, experimental design,methods of analysis and timetable of activities? | See the Methods section | ||
| Q8: How is assay performance monitored over time?What is the plan for reacting to signs of instability? | Where this experimental design is used to test novel compounds, oxycodone or naproxen effects will be monitored as positive controls to track assay stability. First response will be to investigate known sources of variability including equipment calibration and inter-experimenter reliability. | ||
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| Q9: Are inclusion/exclusion criteria for the assayspecified in the protocol/SOP? | Cell inclusion/exclusion is documented in the methods section and is limited to recording quality, animal health and whether they respond to joint rotation within out testable parameters. | ||
| Q10: Is the management of subjectivity in data collectionand reporting defined in the protocol/SOP? | Random allocation to experimental groups, allocation concealment and blinded outcome assessment were implemented and documented as per Sena et al. 2007. | ||
| Q11: If the raw data are processed (e.g. by summarizationor normalization) prior to analysis, is the methodfor doing this specified in the study protocol/SOP? | Change from baseline calculations are performed using ANCOVA and adjusted means are reported. This is documented in the methods section. | ||
| Q12: Are rules for treating data as outliers in theanalysis specified in the protocol/SOP? | Outliers are identified as part of the statistical model fitting process and documented. | ||
| Q13: Is the analysis specified in the study <@?show=[sr]?>protocol/SOP?Is it fit for purpose? | A detailed analysis protocol is included in the methods section | ||
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| Confidence for decision making | High | High | High |
| Assay Capability Tool Summary | These experiments are fit for purpose and likely to produce repeatable and reliable data upon which to base further experiments or make preclinical drug research decisions. | ||
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| Target value | Both oxycodone and naproxen showed a maximum ratio of approximately 0.2 (80% reduction) for the tonic response | ||
| Required precision | 95% confidence intervals around the ratio should not overlap with a ratio value of one. | ||
| Required replication | Sample size calculations suggest approximately 19 replications per group. The addition of future experiments will increase the confidence in this estimate. | ||
Figure 2Spinal cord neuron responses to knee joint rotation.
For each of (A), (B) and (C) the top trace shows the rotation stimulus set with rotation angle increasing in 20 degree steps and extending at least 40 degrees above the tonic firing threshold. The middle trace shows the PSTH of the response to the rotation set. White arrow denotes phasic threshold, black arrow denotes tonic threshold and bin width = 0.05 ms. The bottom trace shows the neural waveform during the joint rotation stimulus set. (A) Response from a cell showing no ongoing spike activity and high response threshold (B) A cell showing little ongoing spike activity, low threshold and extended firing after stimulus offset (C) A cell showing high ongoing spike activity with a low response threshold.
Figure 3Effects of oxycodone on spinal dorsal horn neuronal activity.
Each row shows the results for an exploratory endpoint with ANCOVA adjusted means on the left (error bars ± sem) and the ratios of adjusted means for oxycodone/saline on the right (error bars ±95%CI). Ratio graphs focus on 0, 30, 60 and 90 minutes, the time points at which a following cohort of animals was determined to have (mean±sem) 0±0 nM, 44±6 nM, 217±24 nM and 70±12 nM free plasma concentration of oxycodone respectively. The 90 minute time point is after a 30 minute infusion of 20 mg/kg/hr naloxone with no oxycodone infused. (A) tonic spike count during the six seconds following phasic spiking (B) phasic spiking during the first one second after rotation onset (C) ongoing activity quantified during the 120 seconds preceding each stimulus set (D) afterdischarge during the 120 seconds following the last rotation of each set.
Figure 4Effects of naproxen on spinal dorsal horn neuronal activity.
Each row shows the results for an exploratory endpoint with ANCOVA adjusted means on the left (error bars ± sem) and the ratios of adjusted means for naproxen/saline on the right (error bars ±95%CI). Ratio graphs focus on 0, 30, and 60 minutes, the time points at which these animals were determined to have (mean±sem) 0±0 nM, 165±28 nM and 697±45 nM free plasma concentration of naproxen respectively and 90 minutes which is after 30 minutes of no infusion resulting in 567±34 nM free plasma concentration. (A) tonic spike count during the six seconds following phasic spiking (B) phasic spiking during the first one second after rotation onset (C) ongoing activity quantified during the 120 seconds preceding each stimulus set and (D) afterdischarge during the 120 seconds following the last rotation of each set.