Literature DB >> 25157154

The class III ribonucleotide reductase from Neisseria bacilliformis can utilize thioredoxin as a reductant.

Yifeng Wei1, Michael A Funk2, Leonardo A Rosado2, Jiyeon Baek2, Catherine L Drennan3, JoAnne Stubbe4.   

Abstract

The class III anaerobic ribonucleotide reductases (RNRs) studied to date couple the reduction of ribonucleotides to deoxynucleotides with the oxidation of formate to CO2. Here we report the cloning and heterologous expression of the Neisseria bacilliformis class III RNR and show that it can catalyze nucleotide reduction using the ubiquitous thioredoxin/thioredoxin reductase/NADPH system. We present a structural model based on a crystal structure of the homologous Thermotoga maritima class III RNR, showing its architecture and the position of conserved residues in the active site. Phylogenetic studies suggest that this form of class III RNR is present in bacteria and archaea that carry out diverse types of anaerobic metabolism.

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Year:  2014        PMID: 25157154      PMCID: PMC4246965          DOI: 10.1073/pnas.1414396111

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  81 in total

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3.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

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5.  Hydrogen exchange of the glycyl radical of pyruvate formate-lyase is catalyzed by cysteine 419.

Authors:  C V Parast; K K Wong; S A Lewisch; J W Kozarich; J Peisach; R S Magliozzo
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6.  Structural basis for glycyl radical formation by pyruvate formate-lyase activating enzyme.

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8.  Intron-containing T4 bacteriophage gene sunY encodes an anaerobic ribonucleotide reductase.

Authors:  P Young; M Ohman; M Q Xu; D A Shub; B M Sjöberg
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9.  Atomic structures of the human immunophilin FKBP-12 complexes with FK506 and rapamycin.

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  13 in total

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Review 4.  NADPH-dependent and -independent disulfide reductase systems.

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Review 5.  The origin and evolution of ribonucleotide reduction.

Authors:  Daniel Lundin; Gustav Berggren; Derek T Logan; Britt-Marie Sjöberg
Journal:  Life (Basel)       Date:  2015-02-27

6.  The Crystal Structure of Thermotoga maritima Class III Ribonucleotide Reductase Lacks a Radical Cysteine Pre-Positioned in the Active Site.

Authors:  Oskar Aurelius; Renzo Johansson; Viktoria Bågenholm; Daniel Lundin; Fredrik Tholander; Alexander Balhuizen; Tobias Beck; Margareta Sahlin; Britt-Marie Sjöberg; Etienne Mulliez; Derek T Logan
Journal:  PLoS One       Date:  2015-07-06       Impact factor: 3.240

7.  A >200 meV Uphill Thermodynamic Landscape for Radical Transport in Escherichia coli Ribonucleotide Reductase Determined Using Fluorotyrosine-Substituted Enzymes.

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8.  Biochemical Function, Molecular Structure and Evolution of an Atypical Thioredoxin Reductase from Desulfovibrio vulgaris.

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9.  A Ferredoxin Disulfide Reductase Delivers Electrons to the Methanosarcina barkeri Class III Ribonucleotide Reductase.

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Review 10.  New tricks for the glycyl radical enzyme family.

Authors:  Lindsey R F Backman; Michael A Funk; Christopher D Dawson; Catherine L Drennan
Journal:  Crit Rev Biochem Mol Biol       Date:  2017-09-13       Impact factor: 8.250

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