Literature DB >> 25153337

Implications of population structure and ancestry on asthma genetic studies.

Victor E Ortega1, Deborah A Meyers.   

Abstract

PURPOSE OF REVIEW: The frequency and severity of asthma differ between different racial and ethnic groups. An understanding of the genetic basis for these differences could constitute future genetic biomarker panels for predicting asthma risk and progression in individuals from different ethnic groups. RECENT THEMES: The recent mixing of different ancestries during the European colonization of the Americas and the African slave trade has resulted in the complex population structures identified in different ethnic groups. These population structures represent varying degrees of genetic diversity which impacts the allele frequency of individual variants and, thus, how the gene variation is utilized in genetic association studies. In this review, we will discuss the basis for the complex population structures of modern human genomes and the impact of genetic diversity on genetic studies in different ethnic groups. We will also highlight the potential for admixture and rare variant-based genetic studies to identify novel genetic loci for asthma susceptibility and severity.
SUMMARY: The ability to account for the consequences of genetic diversity in different racial and ethnic groups will be critical in developing genetic profiles for personalized or precision medicine approaches tailored to asthmatic patients from different ethnic groups.

Entities:  

Mesh:

Year:  2014        PMID: 25153337      PMCID: PMC4278361          DOI: 10.1097/ACI.0000000000000102

Source DB:  PubMed          Journal:  Curr Opin Allergy Clin Immunol        ISSN: 1473-6322


  62 in total

1.  Asthma mortality in U.S. Hispanics of Mexican, Puerto Rican, and Cuban heritage, 1990-1995.

Authors:  D M Homa; D M Mannino; M Lara
Journal:  Am J Respir Crit Care Med       Date:  2000-02       Impact factor: 21.405

2.  Genomewide screen and identification of gene-gene interactions for asthma-susceptibility loci in three U.S. populations: collaborative study on the genetics of asthma.

Authors:  J Xu; D A Meyers; C Ober; M N Blumenthal; B Mellen; K C Barnes; R A King; L A Lester; T D Howard; J Solway; C D Langefeld; T H Beaty; S S Rich; E R Bleecker; N J Cox
Journal:  Am J Hum Genet       Date:  2001-05-10       Impact factor: 11.025

3.  Evidence for gene-environment interactions in a linkage study of asthma and smoking exposure.

Authors:  Susan Colilla; Dan Nicolae; Anna Pluzhnikov; Malcolm N Blumenthal; Terri H Beaty; Eugene R Bleecker; Ethan M Lange; Stephen S Rich; Deborah A Meyers; Carole Ober; Nancy J Cox
Journal:  J Allergy Clin Immunol       Date:  2003-04       Impact factor: 10.793

4.  Positional cloning of a novel gene influencing asthma from chromosome 2q14.

Authors:  Maxine Allen; Andrea Heinzmann; Emiko Noguchi; Gonçalo Abecasis; John Broxholme; Chris P Ponting; Sumit Bhattacharyya; Jon Tinsley; Youming Zhang; Richard Holt; E Yvonne Jones; Nick Lench; Alisoun Carey; Helene Jones; Nicholas J Dickens; Claire Dimon; Rosie Nicholls; Crystal Baker; Luzheng Xue; Elizabeth Townsend; Michael Kabesch; Stephan K Weiland; David Carr; Erika von Mutius; Ian M Adcock; Peter J Barnes; G Mark Lathrop; Mark Edwards; Miriam F Moffatt; William O C M Cookson
Journal:  Nat Genet       Date:  2003-10-19       Impact factor: 38.330

5.  Lower bronchodilator responsiveness in Puerto Rican than in Mexican subjects with asthma.

Authors:  Esteban González Burchard; Pedro C Avila; Sylvette Nazario; Jesus Casal; Alfonso Torres; Jose R Rodriguez-Santana; Monica Toscano; Jody Senter Sylvia; MariaElena Alioto; Michael Salazar; Ivan Gomez; Joanne K Fagan; Jorge Salas; Craig Lilly; Henry Matallana; Elad Ziv; Richard Castro; Moises Selman; Rocio Chapela; Dean Sheppard; Scott T Weiss; Jean G Ford; Homer A Boushey; William Rodriguez-Cintron; Jeffrey M Drazen; Edwin K Silverman
Journal:  Am J Respir Crit Care Med       Date:  2003-11-14       Impact factor: 21.405

6.  Genome-wide association study and admixture mapping identify different asthma-associated loci in Latinos: the Genes-environments & Admixture in Latino Americans study.

Authors:  Joshua M Galanter; Christopher R Gignoux; Dara G Torgerson; Lindsey A Roth; Celeste Eng; Sam S Oh; Elizabeth A Nguyen; Katherine A Drake; Scott Huntsman; Donglei Hu; Saunak Sen; Adam Davis; Harold J Farber; Pedro C Avila; Emerita Brigino-Buenaventura; Michael A LeNoir; Kelley Meade; Denise Serebrisky; Luisa N Borrell; William Rodríguez-Cintrón; Andres Moreno Estrada; Karla Sandoval Mendoza; Cheryl A Winkler; William Klitz; Isabelle Romieu; Stephanie J London; Frank Gilliland; Fernando Martinez; Carlos Bustamante; L Keoki Williams; Rajesh Kumar; José R Rodríguez-Santana; Esteban G Burchard
Journal:  J Allergy Clin Immunol       Date:  2014-01-07       Impact factor: 10.793

Review 7.  Genetic perspectives on human origins and differentiation.

Authors:  H Harpending; A Rogers
Journal:  Annu Rev Genomics Hum Genet       Date:  2000       Impact factor: 8.929

8.  Methods for high-density admixture mapping of disease genes.

Authors:  Nick Patterson; Neil Hattangadi; Barton Lane; Kirk E Lohmueller; David A Hafler; Jorge R Oksenberg; Stephen L Hauser; Michael W Smith; Stephen J O'Brien; David Altshuler; Mark J Daly; David Reich
Journal:  Am J Hum Genet       Date:  2004-04-14       Impact factor: 11.025

9.  Association of a disintegrin and metalloprotease 33 (ADAM33) gene with asthma in ethnically diverse populations.

Authors:  Timothy D Howard; Dirkje S Postma; Hajo Jongepier; Wendy C Moore; Gerard H Koppelman; Siqun L Zheng; Jianfeng Xu; Eugene R Bleecker; Deborah A Meyers
Journal:  J Allergy Clin Immunol       Date:  2003-10       Impact factor: 10.793

10.  Sequence variations in the public human genome data reflect a bottlenecked population history.

Authors:  Gabor Marth; Greg Schuler; Raymond Yeh; Ruth Davenport; Richa Agarwala; Deanna Church; Sarah Wheelan; Jonathan Baker; Ming Ward; Michael Kholodov; Lon Phan; Eva Czabarka; Janos Murvai; David Cutler; Stephen Wooding; Alan Rogers; Aravinda Chakravarti; Henry C Harpending; Pui-Yan Kwok; Stephen T Sherry
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-26       Impact factor: 11.205

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  5 in total

Review 1.  What Ancestry Can Tell Us About the Genetic Origins of Inter-Ethnic Differences in Asthma Expression.

Authors:  Natalia Hernandez-Pacheco; Carlos Flores; Sam S Oh; Esteban G Burchard; Maria Pino-Yanes
Journal:  Curr Allergy Asthma Rep       Date:  2016-07       Impact factor: 4.806

2.  Beta 2 Adrenergic Receptor Genetic Polymorphisms in Bronchial Asthma: Relationship to Disease Risk, Severity, and Treatment Response.

Authors:  Aliaë A R Mohamed-Hussein; Suzan S Sayed; Heba M Saad Eldien; Azza M Assar; Fatma E Yehia
Journal:  Lung       Date:  2018-09-03       Impact factor: 2.584

3.  Transethnic associations among immune-mediated diseases and single-nucleotide polymorphisms of the aryl hydrocarbon response gene ARNT and the PTPN22 immune regulatory gene.

Authors:  Shepherd H Schurman; Terrance P O'Hanlon; John A McGrath; Artiom Gruzdev; Arsun Bektas; Hong Xu; Stavros Garantziotis; Darryl C Zeldin; Frederick W Miller
Journal:  J Autoimmun       Date:  2019-11-21       Impact factor: 7.094

4.  Burden of rare coding variants reveals genetic heterogeneity between obese and non-obese asthma patients in the African American population.

Authors:  Yichuan Liu; Hui-Qi Qu; Jingchun Qu; Xiao Chang; Frank D Mentch; Kenny Nguyen; Lifeng Tian; Joseph Glessner; Patrick M A Sleiman; Hakon Hakonarson
Journal:  Respir Res       Date:  2022-05-06

5.  Subtypes of Native American ancestry and leading causes of death: Mapuche ancestry-specific associations with gallbladder cancer risk in Chile.

Authors:  Justo Lorenzo Bermejo; Felix Boekstegers; Rosa González Silos; Katherine Marcelain; Pablo Baez Benavides; Carol Barahona Ponce; Bettina Müller; Catterina Ferreccio; Jill Koshiol; Christine Fischer; Barbara Peil; Janet Sinsheimer; Macarena Fuentes Guajardo; Olga Barajas; Rolando Gonzalez-Jose; Gabriel Bedoya; Maria Cátira Bortolini; Samuel Canizales-Quinteros; Carla Gallo; Andres Ruiz Linares; Francisco Rothhammer
Journal:  PLoS Genet       Date:  2017-05-25       Impact factor: 5.917

  5 in total

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