| Literature DB >> 25152706 |
Mieko Aoki1, Tetsuya Takao2, Kyoichi Takao3, Fumihiko Koike4, Narufumi Suganuma5.
Abstract
BACKGROUND: Despite the fact that smokers have deficit in detecting taste, particularly bitter taste, no study has investigated its biological correlate.Entities:
Keywords: Cigarette; Human; RT-PCR; TAS2R
Year: 2014 PMID: 25152706 PMCID: PMC4142065 DOI: 10.1186/1617-9625-12-12
Source DB: PubMed Journal: Tob Induc Dis ISSN: 1617-9625 Impact factor: 2.600
List of the sequences of the oligonucleotides used for TAS2R amplification
| TAS2R1 | NM_019599 | TAS2R1/F | atg cta gag tct cac ctc att atc | 900 bp |
| | | TAS2R1/R | tca ctg aca gca ctt act gtg gag g | |
| TAS2R3 | NM_016943 | TAS2R3/F | atg atg gga ctc acc gag ggg g | 951 bp |
| | | TAS2R3/R | cta aga gaa aat ggg tcc ctt gg | |
| TAS2R4 | NM_016944 | TAS2R4/F | atg ctt cgg tta ttc tat ttc | 900 bp |
| | | TAS2R4/R | cta ttt ttt gaa aca aag aat c | |
| TAS2R5 | NM_018980 | TAS2R5/F | atg ctg agc gct ggc cta gga ctg | 900 bp |
| | | TAS2R5/R | tca tgg gcc cca gca tct ccg agc | |
| TAS2R7 | NM_023919 | TAS2R7/F | atg gca gat aaa gtg cag act ac | 957 bp |
| | | TAS2R7/R | tca gat ttg ttt atg ttg ttg ga | |
| TAS2R8 | NM_023918 | TAS2R8/F | atg ttc agt cct gca gat aac | 930 bp |
| | | TAS2R8/R | tca tat cat gca ggc aat ttt tc | |
| TAS2R9 | NM_023917 | TAS2R9/F | atg cca agt gca ata gag gc | 939 bp |
| | | TAS2R9/R | cta tgg aac aaa agg ctt tc | |
| TAS2R10 | NM_023921 | TAS2R10/F | atg cta cgt gta gtg gaa ggc | 924 bp |
| | | TAS2R10/R | cta tgt gac tct gag att ttt cc | |
| TAS2R13 | NM_023920 | TAS2R13/F | atg gaa agt gcc ctg ccg ag | 912 bp |
| | | TAS2R13/R | tca tcg ttt agc cca tac c | |
| TAS2R14 | NM_023922 | TAS2R14/F | atg ggt ggt gtc ata aag ag | 954 bp |
| | | TAS2R14/R | tca aga tga ttc tct aaa ttc | |
| TAS2R16 | NM_016945 | TAS2R16/F | atg ata ccc atc caa ctc ac | 876 bp |
| | | TAS2R16/R | cta gca ctt tcc ctt | |
| TAS2R19 | NM_176888 | TAS2R19/F | atg atg tgt ttt ctg ctc atc | 900 bp |
| | | TAS2R19/R | tca gcg tgt cat ctg cca caa a | |
| TAS2R20 | NM176889 | TAS2R20/F | atg atg agt ttt cta cac att g | 930 bp |
| | | TAS2R20/R | cta tgg agt tga ctg gtt ctg tcc | |
| TAS2R30 | NM_001097643 | TAS2R30/F | atg ata act ttt ctg ccc atc a | 960 bp |
| | | TAS2R30/R | cta gaa gac aca caa tgc ccc tc | |
| TAS2R31 | NM176885 | TAS2R31/F | atg aca act ttt ata ccc atc | 930 bp |
| | | TAS2R31/R | cta tgg aga tga agg ctt ctc tcc | |
| TAS2R38 | NM_176817 | TAS2R38/F | atg ttg act cta act cgc atc | 1002 bp |
| | | TAS2R38/R | tca gca cag tgt ccg gga atc t | |
| TAS2R39 | NM_176881 | TAS2R39/F | atg cta ggg aga tgt ttt cct cc | 1017 bp |
| | | TAS2R39/R | tca cag agt cca ctc ttt tgg gt | |
| TAS2R40 | NM_176882 | TAS2R40/F | atg gca acg gtg aac aca gat g | 972 bp |
| | | TAS2R40/R | tca cag agt ctg ccc ttt tag gt | |
| TAS2R42 | NM_191429 | TAS2R42/F | atg gcc acc gaa ttg gac | 945 bp |
| | | TAS2R42/R | cta caa agg taa agg gtt tgg tg | |
| TAS2R43 | NM176884 | TAS2R43/F | atg ata act ttt cta ccc atc | 930 bp |
| | | TAS2R43/R | cta tgg aga tga agt ctt ctc tcc | |
| TAS2R45 | NM_176886 | TAS2R45/F | atg ata act ttt ctg ccc atc | 900 bp |
| TAS2R45/R | tca gta cct cat ttg cca caa aac tg |
Demographic characteristics of participants
| Age (years) | 41.5 | 15.8 | 46.0 | 11.4 | 1.1 | .290 |
| Duration of smoking (years) | NA | NA | 24.3 | 9.7 | NA | NA |
| Number of cigarettes smoked daily | NA | NA | 17.4 | 7.0 | NA | NA |
| Brinkman index | NA | NA | 430 | 246.7 | NA | NA |
Abbreviations: NA, not applicable; SD, standard deviation.
Figure 1Genomic DNA fragmentation by a homogenate. The genomic DNA isolated from the lower phase of the TRIzol Reagent treated specimen was observed only in 200 bp or less (indicated by “*”), suggesting that genetic DNAs were fragmented into small fraction during the process of homogenate and there is no genomic DNAs that are large enough to express TAS2R in the upper phase.
Mean age and expression of TAS2R and its subfamily
| Total TAS2R expression | 11.36 | 6.04 | 2.09 | 2.81 | 6.525 | 42 | < .0001* |
| TAS2R subfamily expression | | | | | | | |
| TAS2R1 | .55 | .51 | .18 | .59 | 2.191 | 42 | .0341 |
| TAS2R3 | .68 | .48 | .45 | .67 | 1.295 | 42 | .2024 |
| TAS2R4 | .32 | .48 | .36 | .73 | .25 | 42 | .8074 |
| TAS2R5 | .36 | .49 | .27 | .70 | .50 | 42 | .6217 |
| TAS2R7 | .64 | .49 | .09 | .43 | 3.928 | 42 | .0003* |
| TAS2R8 | .82 | .39 | .55 | .67 | 1.643 | 42 | .1078 |
| TAS2R9 | .82 | .39 | .32 | .57 | 3.391 | 42 | .0011* |
| TAS2R10 | .77 | .43 | .36 | .58 | 2.657 | 42 | .0111 |
| TAS2R13 | .45 | .51 | .18 | .59 | 1.643 | 42 | .1078 |
| TAS2R14 | .36 | .49 | .32 | .57 | .28 | 42 | .7781 |
| TAS2R16 | .64 | .49 | .27 | .46 | 2.542 | 42 | .0148 |
| TAS2R19 | .59 | .50 | .14 | .47 | 3.104 | 42 | .0034 |
| TAS2R20 | .27 | .46 | 0 | 0 | 2.806 | 42 | .0076 |
| TAS2R30 | .73 | .46 | 0 | 0 | 7.483 | 42 | < .0001* |
| TAS2R31 | .27 | .46 | 0 | 0 | 2.806 | 42 | .0076 |
| TAS2R38 | .59 | .50 | 0 | 0 | 5.508 | 42 | < .0001* |
| TAS2R39 | .55 | .51 | .18 | .50 | 2.386 | 42 | .0216 |
| TAS2R40 | .64 | .49 | .36 | .73 | 1.457 | 42 | .1525 |
| TAS2R42 | .23 | .43 | 0 | 0 | 2.485 | 42 | .0170 |
| TAS2R43 | .41 | .50 | .14 | .47 | 1.862 | 42 | .0696 |
| TAS2R45 | .50 | .51 | 0 | 0 | 4.583 | 42 | < .0001* |
*significant after Bonferroni correction.
Figure 2Relation between number of expression of TAS2R and age and smoking behaviors. A significant positive correlation was observed between age and bitter taste receptor expression in non-smokers but not in smokers (a). There was no significant association between bitter taste receptor expression and duration of smoking (b), the number of cigarettes smoked daily (c), and the Brinkman index (d).