Literature DB >> 25151276

The iron-sulfur core in Rieske proteins is not symmetric.

Md Ehesan Ali1, Nisanth N Nair, Marius Retegan, Frank Neese, Volker Staemmler, Dominik Marx.   

Abstract

At variance with ferredoxins, Rieske-type proteins contain a chemically asymmetric iron-sulfur cluster. Nevertheless, X-ray crystallography apparently finds their [2Fe-2S] cores to be structurally symmetric or very close to symmetric (i.e. the four iron-sulfur bonds in the [2Fe-2S] core are equidistant). Using a combination of advanced density-based approaches, including finite-temperature molecular dynamics to access thermal fluctuations and free-energy profiles, in conjunction with correlated wavefunction-based methods we clearly predict an asymmetric core structure. This reveals a fundamental and intrinsic difference within the iron-sulfur clusters hosted by Rieske proteins and ferredoxins and thus opens up a new dimension for the ongoing efforts in understanding the role of Rieske-type [2Fe-2S] cluster in electron transfer processes that occur in almost all biological systems.

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Year:  2014        PMID: 25151276     DOI: 10.1007/s00775-014-1185-7

Source DB:  PubMed          Journal:  J Biol Inorg Chem        ISSN: 0949-8257            Impact factor:   3.358


  26 in total

1.  Generalized Gradient Approximation Made Simple.

Authors: 
Journal:  Phys Rev Lett       Date:  1996-10-28       Impact factor: 9.161

2.  Revealing the magnetostructural dynamics of [2Fe-2S] ferredoxins from reduced-dimensionality analysis of antiferromagnetic exchange coupling fluctuations.

Authors:  S Annamaria Fiethen; Volker Staemmler; Nisanth N Nair; Jordi Ribas-Arino; Eduard Schreiner; Dominik Marx
Journal:  J Phys Chem B       Date:  2010-09-09       Impact factor: 2.991

3.  Magnetostructural Dynamics with the Extended Broken Symmetry Formalism: Antiferromagnetic [2Fe-2S] Complexes.

Authors:  Nisanth N Nair; Eduard Schreiner; Rodolphe Pollet; Volker Staemmler; Dominik Marx
Journal:  J Chem Theory Comput       Date:  2008-08       Impact factor: 6.006

4.  Magnetostructural Dynamics from Hubbard-U Corrected Spin-Projection: [2Fe-2S] Complex in Ferredoxin.

Authors:  Nisanth N Nair; Jordi Ribas-Arino; Volker Staemmler; Dominik Marx
Journal:  J Chem Theory Comput       Date:  2010-02-09       Impact factor: 6.006

5.  A synthetic analogue of Rieske-type [2Fe-2S] clusters.

Authors:  Joachim Ballmann; Antonia Albers; Serhiy Demeshko; Sebastian Dechert; Eckhard Bill; Eberhard Bothe; Ulf Ryde; Franc Meyer
Journal:  Angew Chem Int Ed Engl       Date:  2008       Impact factor: 15.336

6.  Resonance Raman characterization of archaeal and bacterial Rieske protein variants with modified hydrogen bond network around the [2Fe-2S] center.

Authors:  Toshio Iwasaki; Asako Kounosu; Derrick R J Kolling; Sangmoon Lhee; Antony R Crofts; Sergei A Dikanov; Takuro Uchiyama; Takashi Kumasaka; Hiroyuki Ishikawa; Miwa Kono; Takeo Imai; Akio Urushiyama
Journal:  Protein Sci       Date:  2006-08       Impact factor: 6.725

7.  Redox potential of the Rieske iron-sulfur protein quantum-chemical and electrostatic study.

Authors:  Andrey M Kuznetsov; Ekaterina M Zueva; Alexei N Masliy; Lev I Krishtalik
Journal:  Biochim Biophys Acta       Date:  2009-12-21

8.  Constrained spin-density dynamics of an iron-sulfur complex: ferredoxin cofactor.

Authors:  Md Ehesan Ali; Nisanth N Nair; Volker Staemmler; Dominik Marx
Journal:  J Chem Phys       Date:  2012-06-14       Impact factor: 3.488

9.  Formation and characterization of an all-ferrous Rieske cluster and stabilization of the [2Fe-2S]0 core by protonation.

Authors:  Ellen J Leggate; Eckhard Bill; Timm Essigke; G Matthias Ullmann; Judy Hirst
Journal:  Proc Natl Acad Sci U S A       Date:  2004-07-19       Impact factor: 11.205

10.  Resonance Raman studies of Rieske-type proteins.

Authors:  D Kuila; J R Schoonover; R B Dyer; C J Batie; D P Ballou; J A Fee; W H Woodruff
Journal:  Biochim Biophys Acta       Date:  1992-12-07
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