Literature DB >> 15263097

Formation and characterization of an all-ferrous Rieske cluster and stabilization of the [2Fe-2S]0 core by protonation.

Ellen J Leggate1, Eckhard Bill, Timm Essigke, G Matthias Ullmann, Judy Hirst.   

Abstract

The all-ferrous Rieske cluster, [2Fe-2S](0), has been produced in solution and characterized by protein-film voltammetry and UV-visible, EPR, and Mössbauer spectroscopies. The [2Fe-2S](0) cluster, in the overexpressed soluble domain of the Rieske protein from the bovine cytochrome bc(1) complex, is formed at -0.73 V at pH 7. Therefore, at pH 7, the [2Fe-2S](1+/0) couple is 1.0 V below the [2Fe-2S](2+/1+) couple. The two cluster-bound ferrous irons are both high spin (S = 2), and they are coupled antiferromagnetically (-J > or = 30 cm(-1), H =-2JS1.S2) to give a diamagnetic (S = 0) ground state. The ability of the Rieske cluster to exist in three oxidation states (2+, 1+, and 0) without an accompanying coupled reaction, such as a conformational change or protonation, is highly unusual. However, uncoupled reduction to the [2Fe-2S](0) state occurs at pH > 9.8 only, and at high pH the intact cluster persists in solution for <1 min. At pH < 9.8, the all-ferrous cluster is stabilized significantly by protonation. A combination of experimental data and calculations based on density functional theory suggests strongly that the proton binds to one of the cluster mu(2)-sulfides, consistent with observations that reduced [3Fe-4S] clusters are protonated also. The implications for our understanding of coupled reactions at iron-sulfur clusters and of the factors that determine the relative stabilities of their different oxidation states are discussed.

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Year:  2004        PMID: 15263097      PMCID: PMC503719          DOI: 10.1073/pnas.0402711101

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  28 in total

1.  Crystal structure of the all-ferrous [4Fe-4S]0 form of the nitrogenase iron protein from Azotobacter vinelandii.

Authors:  P Strop; P M Takahara; H Chiu; H C Angove; B K Burgess; D C Rees
Journal:  Biochemistry       Date:  2001-01-23       Impact factor: 3.162

2.  Mechanism of Molybdenum Nitrogenase.

Authors:  Barbara K. Burgess; David J. Lowe
Journal:  Chem Rev       Date:  1996-11-07       Impact factor: 60.622

3.  Formation, Properties, and Characterization of a Fully Reduced Fe(II)Fe(II) Form of Spinach (and Parsley) [2Fe-2S] Ferredoxin with the Macrocyclic Complex [Cr(15-aneN(4))(H(2)O)(2)](2+) as Reductant.

Authors:  Sang-Choul Im; Takamitsu Kohzuma; William McFarlane; Jacques Gaillard; A. Geoffrey Sykes
Journal:  Inorg Chem       Date:  1997-03-26       Impact factor: 5.165

4.  Comparison of the spin-lattice relaxation properties of the two classes of [2Fe-2S] clusters in proteins.

Authors:  P Bertrand; J P Gayda; J A Fee; D Kuila; R Cammack
Journal:  Biochim Biophys Acta       Date:  1987-11-05

Review 5.  Iron-sulfur clusters: nature's modular, multipurpose structures.

Authors:  H Beinert; R H Holm; E Münck
Journal:  Science       Date:  1997-08-01       Impact factor: 47.728

6.  Breaking and re-forming the disulfide bond at the high-potential, respiratory-type Rieske [2Fe-2S] center of thermus thermophilus: characterization of the sulfhydryl state by protein-film voltammetry.

Authors:  Yanbing Zu; James A Fee; Judy Hirst
Journal:  Biochemistry       Date:  2002-11-26       Impact factor: 3.162

7.  Investigations of the oxidative disassembly of Fe-S clusters in Clostridium pasteurianum 8Fe ferredoxin using pulsed-protein-film voltammetry.

Authors:  R Camba; F A Armstrong
Journal:  Biochemistry       Date:  2000-08-29       Impact factor: 3.162

8.  Instantaneous, stoichiometric generation of powerfully reducing states of protein active sites using Eu(II) and polyaminocarboxylate ligands.

Authors:  Kylie A Vincent; Gareth J Tilley; Nina C Quammie; Ian Streeter; Barbara K Burgess; Myles R Cheesman; Fraser A Armstrong
Journal:  Chem Commun (Camb)       Date:  2003-10-21       Impact factor: 6.222

9.  Reversible super-reduction of the cubane [4Fe-4S](3+;2+;1+) in the high-potential iron-sulfur protein under non-denaturing conditions. EPR spectroscopic and electrochemical studies.

Authors:  H A Heering; Y B Bulsink; W R Hagen; T E Meyer
Journal:  Eur J Biochem       Date:  1995-09-15

10.  Azotobacter vinelandii ferredoxin I. Aspartate 15 facilitates proton transfer to the reduced [3Fe-4S] cluster.

Authors:  B Shen; L L Martin; J N Butt; F A Armstrong; C D Stout; G M Jensen; P J Stephens; G N La Mar; C M Gorst; B K Burgess
Journal:  J Biol Chem       Date:  1993-12-05       Impact factor: 5.157

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  11 in total

Review 1.  Investigating the mechanisms of photosynthetic proteins using continuum electrostatics.

Authors:  G Matthias Ullmann; Edda Kloppmann; Timm Essigke; Eva-Maria Krammer; Astrid R Klingen; Torsten Becker; Elisa Bombarda
Journal:  Photosynth Res       Date:  2008-05-14       Impact factor: 3.573

2.  Oxidized and reduced [2Fe-2S] clusters from an iron(I) synthon.

Authors:  Megan E Reesbeck; Meghan M Rodriguez; William W Brennessel; Brandon Q Mercado; David Vinyard; Patrick L Holland
Journal:  J Biol Inorg Chem       Date:  2015-06-05       Impact factor: 3.358

3.  The iron-sulfur core in Rieske proteins is not symmetric.

Authors:  Md Ehesan Ali; Nisanth N Nair; Marius Retegan; Frank Neese; Volker Staemmler; Dominik Marx
Journal:  J Biol Inorg Chem       Date:  2014-08-24       Impact factor: 3.358

Review 4.  Metalloproteins containing cytochrome, iron-sulfur, or copper redox centers.

Authors:  Jing Liu; Saumen Chakraborty; Parisa Hosseinzadeh; Yang Yu; Shiliang Tian; Igor Petrik; Ambika Bhagi; Yi Lu
Journal:  Chem Rev       Date:  2014-04-23       Impact factor: 60.622

5.  Postbiosynthetic modification of a precursor to the nitrogenase iron-molybdenum cofactor.

Authors:  Suppachai Srisantitham; Edward D Badding; Daniel L M Suess
Journal:  Proc Natl Acad Sci U S A       Date:  2021-03-08       Impact factor: 11.205

6.  High-Resolution ENDOR Spectroscopy Combined with Quantum Chemical Calculations Reveals the Structure of Nitrogenase Janus Intermediate E4(4H).

Authors:  Veronika Hoeke; Laura Tociu; David A Case; Lance C Seefeldt; Simone Raugei; Brian M Hoffman
Journal:  J Am Chem Soc       Date:  2019-07-16       Impact factor: 15.419

7.  A [2Fe-1S] Complex That Affords Access to Bimetallic and Higher-Nuclearity Iron-Sulfur Clusters.

Authors:  Daniel E DeRosha; Nicholas A Arnet; Brandon Q Mercado; Patrick L Holland
Journal:  Inorg Chem       Date:  2019-06-19       Impact factor: 5.165

Review 8.  Resonance Raman spectroscopy of Fe-S proteins and their redox properties.

Authors:  Smilja Todorovic; Miguel Teixeira
Journal:  J Biol Inorg Chem       Date:  2018-01-24       Impact factor: 3.358

9.  Planar three-coordinate iron sulfide in a synthetic [4Fe-3S] cluster with biomimetic reactivity.

Authors:  Daniel E DeRosha; Vijay G Chilkuri; Casey Van Stappen; Eckhard Bill; Brandon Q Mercado; Serena DeBeer; Frank Neese; Patrick L Holland
Journal:  Nat Chem       Date:  2019-10-14       Impact factor: 24.427

10.  Characterization of Fe-S Clusters in Proteins by Mӧssbauer Spectroscopy.

Authors:  Chie Ueda; Michelle Langton; Maria-Eirini Pandelia
Journal:  Methods Mol Biol       Date:  2021
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