Literature DB >> 25150720

Design and self-assembly of simple coat proteins for artificial viruses.

Armando Hernandez-Garcia1, Daniela J Kraft2, Anne F J Janssen3, Paul H H Bomans4, Nico A J M Sommerdijk4, Dominique M E Thies-Weesie5, Marco E Favretto6, Roland Brock7, Frits A de Wolf8, Marc W T Werten8, Paul van der Schoot9, Martien Cohen Stuart3, Renko de Vries10.   

Abstract

Viruses are among the simplest biological systems and are highly effective vehicles for the delivery of genetic material into susceptible host cells. Artificial viruses can be used as model systems for providing insights into natural viruses and can be considered a testing ground for developing artificial life. Moreover, they are used in biomedical and biotechnological applications, such as targeted delivery of nucleic acids for gene therapy and as scaffolds in material science. In a natural setting, survival of viruses requires that a significant fraction of the replicated genomes be completely protected by coat proteins. Complete protection of the genome is ensured by a highly cooperative supramolecular process between the coat proteins and the nucleic acids, which is based on reversible, weak and allosteric interactions only. However, incorporating this type of supramolecular cooperativity into artificial viruses remains challenging. Here, we report a rational design for a self-assembling minimal viral coat protein based on simple polypeptide domains. Our coat protein features precise control over the cooperativity of its self-assembly with single DNA molecules to finally form rod-shaped virus-like particles. We confirm the validity of our design principles by showing that the kinetics of self-assembly of our virus-like particles follows a previous model developed for tobacco mosaic virus. We show that our virus-like particles protect DNA against enzymatic degradation and transfect cells with considerable efficiency, making them promising delivery vehicles.

Entities:  

Mesh:

Substances:

Year:  2014        PMID: 25150720     DOI: 10.1038/nnano.2014.169

Source DB:  PubMed          Journal:  Nat Nanotechnol        ISSN: 1748-3387            Impact factor:   39.213


  28 in total

1.  Secreted production of a custom-designed, highly hydrophilic gelatin in Pichia pastoris.

Authors:  M W Werten; W H Wisselink; T J Jansen-van den Bosch; E C de Bruin; F A de Wolf
Journal:  Protein Eng       Date:  2001-06

Review 2.  Fabrication of novel biomaterials through molecular self-assembly.

Authors:  Shuguang Zhang
Journal:  Nat Biotechnol       Date:  2003-10       Impact factor: 54.908

Review 3.  Rational design of smart supramolecular assemblies for gene delivery: chemical challenges in the creation of artificial viruses.

Authors:  Kanjiro Miyata; Nobuhiro Nishiyama; Kazunori Kataoka
Journal:  Chem Soc Rev       Date:  2011-11-21       Impact factor: 54.564

4.  A kinetic Zipper model and the assembly of tobacco mosaic virus.

Authors:  Daniela J Kraft; Willem K Kegel; Paul van der Schoot
Journal:  Biophys J       Date:  2012-06-19       Impact factor: 4.033

5.  Cooperativity in macromolecular assembly.

Authors:  James R Williamson
Journal:  Nat Chem Biol       Date:  2008-08       Impact factor: 15.040

6.  A virus-based single-enzyme nanoreactor.

Authors:  Marta Comellas-Aragonès; Hans Engelkamp; Victor I Claessen; Nico A J M Sommerdijk; Alan E Rowan; Peter C M Christianen; Jan C Maan; Benedictus J M Verduin; Jeroen J L M Cornelissen; Roeland J M Nolte
Journal:  Nat Nanotechnol       Date:  2007-09-23       Impact factor: 39.213

7.  Mutants of the bacteriophage MS2 coat protein that alter its cooperative binding to RNA.

Authors:  K A LeCuyer; L S Behlen; O C Uhlenbeck
Journal:  Biochemistry       Date:  1995-08-22       Impact factor: 3.162

Review 8.  Switching in the self-assembly of tobacco mosaic virus.

Authors:  D L Caspar; K Namba
Journal:  Adv Biophys       Date:  1990

9.  Targeted gene transfer into hepatoma cells with lipopolyamine-condensed DNA particles presenting galactose ligands: a stage toward artificial viruses.

Authors:  J S Remy; A Kichler; V Mordvinov; F Schuber; J P Behr
Journal:  Proc Natl Acad Sci U S A       Date:  1995-02-28       Impact factor: 11.205

Review 10.  Strategies to improve DNA polyplexes for in vivo gene transfer: will "artificial viruses" be the answer?

Authors:  Ernst Wagner
Journal:  Pharm Res       Date:  2004-01       Impact factor: 4.200

View more
  29 in total

1.  Assessing sequence plasticity of a virus-like nanoparticle by evolution toward a versatile scaffold for vaccines and drug delivery.

Authors:  Yuan Lu; Wei Chan; Benjamin Y Ko; Christopher C VanLang; James R Swartz
Journal:  Proc Natl Acad Sci U S A       Date:  2015-09-21       Impact factor: 11.205

2.  Collective helicity switching of a DNA-coat assembly.

Authors:  Yongju Kim; Huichang Li; Ying He; Xi Chen; Xiaoteng Ma; Myongsoo Lee
Journal:  Nat Nanotechnol       Date:  2017-03-27       Impact factor: 39.213

3.  Laboratory evolution of virus-like nucleocapsids from nonviral protein cages.

Authors:  Naohiro Terasaka; Yusuke Azuma; Donald Hilvert
Journal:  Proc Natl Acad Sci U S A       Date:  2018-05-07       Impact factor: 11.205

4.  Evolution of a designed protein assembly encapsulating its own RNA genome.

Authors:  Gabriel L Butterfield; Marc J Lajoie; Heather H Gustafson; Drew L Sellers; Una Nattermann; Daniel Ellis; Jacob B Bale; Sharon Ke; Garreck H Lenz; Angelica Yehdego; Rashmi Ravichandran; Suzie H Pun; Neil P King; David Baker
Journal:  Nature       Date:  2017-12-13       Impact factor: 49.962

Review 5.  Production of protein-based polymers in Pichia pastoris.

Authors:  Marc W T Werten; Gerrit Eggink; Martien A Cohen Stuart; Frits A de Wolf
Journal:  Biotechnol Adv       Date:  2019-03-19       Impact factor: 14.227

6.  A kinetic model for the impact of packaging signal mimics on genome encapsulation.

Authors:  René de Bruijn; Pieta Cornelia Martha Wielstra; Carlos Calcines-Cruz; Tom van Waveren; Armando Hernandez-Garcia; Paul van der Schoot
Journal:  Biophys J       Date:  2022-05-30       Impact factor: 3.699

7.  Formation of functional super-helical assemblies by constrained single heptad repeat.

Authors:  Sudipta Mondal; Lihi Adler-Abramovich; Ayala Lampel; Yaron Bram; Sophia Lipstman; Ehud Gazit
Journal:  Nat Commun       Date:  2015-10-15       Impact factor: 14.919

8.  Functional properties of flagellin as a stimulator of innate immunity.

Authors:  Yuan Lu; James R Swartz
Journal:  Sci Rep       Date:  2016-01-12       Impact factor: 4.379

9.  Size-Sorting and Pattern Formation of Nanoparticle-Loaded Micellar Superstructures in Biconcave Thin Films.

Authors:  Jan Bart Ten Hove; Junyou Wang; Matthias N van Oosterom; Fijs W B van Leeuwen; Aldrik H Velders
Journal:  ACS Nano       Date:  2017-11-07       Impact factor: 15.881

Review 10.  Strategies to Build Hybrid Protein-DNA Nanostructures.

Authors:  Armando Hernandez-Garcia
Journal:  Nanomaterials (Basel)       Date:  2021-05-18       Impact factor: 5.076

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.