Literature DB >> 25150536

Characterization of cellulolytic activity in the gut of the terrestrial land slug Arion ater: Biochemical identification of targets for intensive study.

Ryan Joynson1, Arvind Swamy1, Paz Aranega Bou1, Ambre Chapuis1, Natalie Ferry2.   

Abstract

The level of cellulolytic activity in different areas of the gut of the terrestrial slug Arion ater was assayed at different temperatures and pH values. To do this, crude gut proteins were isolated and assayed using modified dinitrosalicylic acid reducing sugar assay. Crude protein samples were also separated and cellulolytic activity identified using in gel CMC zymography and esculin hydrate activity gel assays. pH and temperature profiling revealed optimum cellulolytic activity between pH5.0 and 6.0 for different gut regions and retention of up to 90% of activity at temperatures up to 50°C. Zymograms and activity gels revealed multiple endoglucanase and β-glucosidase enzymes. To further investigate the source of this cellulolytic activity bacterial isolates from the gut were tested for endoglucanase and β-glucosidase activity using growth plate assays. 12 cellulolytic microbes were identified using 16S rDNA gene sequencing. These include members of the genera Buttiauxella, Enterobacter, Citrobacter, Serratia and Klebsiella. Gut metagenomic DNA was then subjected to PCR, targeting a 400bp region of the 16SrDNA gene which was subsequently separated and individuals identified using DGGE. This identified members of the genera Citrobacter, Serratia, Pectobacterium, Acinetobacter, Mycoplasma, Pantoea and Erwinia. In summary, multiple glycoside hydrolase enzymes active over a broad range of temperature and pH values in a relatively under studied organism were detected, indicating that the gut of A. ater is a viable target for intensive study to identify novel carbohydrate active enzymes that may be used in the biofuel industry.
Copyright © 2014 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Cellulase; Glycoside hydrolase; Gut fluids; Lignocellulose; Slug

Mesh:

Substances:

Year:  2014        PMID: 25150536     DOI: 10.1016/j.cbpb.2014.08.003

Source DB:  PubMed          Journal:  Comp Biochem Physiol B Biochem Mol Biol        ISSN: 1096-4959            Impact factor:   2.231


  6 in total

1.  Effects of diet type, developmental stage, and gut compartment in the gut bacterial communities of two Cerambycidae species (Coleoptera).

Authors:  Jeong Myeong Kim; Min-Young Choi; Jae-Woo Kim; Shin Ae Lee; Jae-Hyung Ahn; Jaekyeong Song; Seong-Hyun Kim; Hang-Yeon Weon
Journal:  J Microbiol       Date:  2016-12-30       Impact factor: 3.422

2.  Adsorption and mechanism of cellulase enzymes onto lignin isolated from corn stover pretreated with liquid hot water.

Authors:  Xianqin Lu; Xiaoju Zheng; Xuezhi Li; Jian Zhao
Journal:  Biotechnol Biofuels       Date:  2016-06-03       Impact factor: 6.040

3.  Pectobacterium parvum sp. nov., having a Salmonella SPI-1-like Type III secretion system and low virulence.

Authors:  Miia Pasanen; Malgorzata Waleron; Thomas Schott; Ilse Cleenwerck; Agnieszka Misztak; Krzysztof Waleron; Leighton Pritchard; Ramadan Bakr; Yeshitila Degefu; Jan van der Wolf; Peter Vandamme; Minna Pirhonen
Journal:  Int J Syst Evol Microbiol       Date:  2020-02-20       Impact factor: 2.747

4.  Genome Sequence of Citrobacter sp. CtB7.12, Isolated from the Gut of the Desert Subterranean Termite Heterotermes aureus.

Authors:  Héctor Fontes-Perez; Myrna Olvera-García; America Chávez-Martínez; Felipe A Rodriguez-Almeida; Claudio A Arzola-Alvarez; Alejandro Sanchez-Flores; Agustín Corral-Luna
Journal:  Genome Announc       Date:  2015-11-05

5.  Metagenomic Analysis of the Gut Microbiome of the Common Black Slug Arion ater in Search of Novel Lignocellulose Degrading Enzymes.

Authors:  Ryan Joynson; Leighton Pritchard; Ekenakema Osemwekha; Natalie Ferry
Journal:  Front Microbiol       Date:  2017-11-08       Impact factor: 5.640

6.  16S rRNA sequencing reveals likely beneficial core microbes within faecal samples of the EU protected slug Geomalacus maculosus.

Authors:  Inga Reich; Umer Zeeshan Ijaz; Mike Gormally; Cindy J Smith
Journal:  Sci Rep       Date:  2018-07-10       Impact factor: 4.379

  6 in total

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