| Literature DB >> 25147556 |
Megan L Mickum1, Nina S Prasanphanich1, Jamie Heimburg-Molinaro1, Kristoffer E Leon1, Richard D Cummings1.
Abstract
Schistosoma mansoni and other Schistosoma sp. are multicellular parasitic helminths (worms) that infect humans and mammals worldwide. Infection by these parasites, which results in developmental maturation and sexual differentiation of the worms over a period of 5-6 weeks, induces antibodies to glycan antigens expressed in surface and secreted glycoproteins and glycolipids. There is growing interest in defining these unusual parasite-synthesized glycan antigens and using them to understand immune responses, their roles in immunomodulation, and in using glycan antigens as potential vaccine targets. A key problem in this area, however, has been the lack of information about the enzymes involved in elaborating the complex repertoire of glycans represented by the schistosome glycome. Recent availability of the nuclear genome sequences for Schistosoma sp. has created the opportunity to define the glycogenome, which represents the specific genes and cognate enzymes that generate the glycome. Here we describe the current state of information in regard to the schistosome glycogenome and glycome and highlight the important classes of glycans and glycogenes that may be important in their generation.Entities:
Keywords: genome; glycan biosynthesis; glycans; glycoconjugates; glycosyltransferases; schistosomiasis
Year: 2014 PMID: 25147556 PMCID: PMC4122909 DOI: 10.3389/fgene.2014.00262
Source DB: PubMed Journal: Front Genet ISSN: 1664-8021 Impact factor: 4.599
Figure 1The glycogenome represents the genes encoding the various glycosyltransferases, glycosidases, sugar, and nucleotide sugar metabolizing enzymes important in glycan biosynthesis, and nucleotide sugar transporters. The glycosyltransferases generated from the glycotranscriptome in schistosomes represent a large class of predicted enzymes, often requiring metal cofactors, such as manganese (Me2+), that synthesize glycans using donor nucleotide sugars to form glycosidic bonds to acceptors, here represented by a sugar-R, where R = sugar, protein, or lipid to which a sugar is linked. The products of the biosynthetic reactions have specific glycosidic linkages, e.g., β1,4 or α1,3, and the glycans produced are often acceptors for additional enzymes, thus generating the complex set of glycans representing the glycome of the organism. Examples are shown for two glycosyltransferase reactions that together can synthesize the LDN and LDNF antigen determinants. The key for several of the monosaccharides found in schistosome glycans are indicated—Glc (Glucose), Gal (Galactose), Man (Mannose), GlcNAc (N-acetylglucosamine), GalNAc (N-acetylgalactosamine), Fuc (Fucose), and Xyl (Xylose).
Components of the .
| Galactosyltransferases and N-acetylglucosaminyltransferases (GalTs and GnTs) | 14 | Smp 058670 | Smp 056260 | Smp 102400 |
| Smp 006930 | Smp 024650 | Smp 007950 | ||
| Smp 210290 | Smp 015920 | Smp 151210 | ||
| Smp 146430 | Smp 153110 | Smp 151220 | ||
| Smp 042720 | Smp 149820 | |||
| N-acetylgalactosamine transferases (GalNAcTs) | 7 | Smp 057620 | Smp 159490 | Smp 005500 |
| Smp 139230 | Smp 211240 | Smp 021370 | ||
| Smp 047240 | ||||
| Fucosyltransferases (FucTs) | 22 | Smp 175120 | Smp 175120 | Smp 137740 |
| Smp 194990 | Smp 205640 | Smp 028910 | ||
| Smp 199790 | Smp 154410 | Smp 065240 | ||
| Smp 030650 | Smp 138750 | Smp 212520 | ||
| Smp 138730 | Smp 211180 | Smp 137730 | ||
| Smp 193870 | Smp 193620 | Smp 142860 | ||
| Smp 054300 | Smp 209060 | Smp 129750 | ||
| Xylosyltransferase | 2 | Smp 128310 | Smp 125150 | |
| N-Glycan | 18e,f | Smp 051360 | Smp 045430 | Smp 082710 |
| Smp 055010 | Smp 177080 | Smp 052330 | ||
| Smp 161590 | Smp 103930 | Smp 020770 | ||
| Smp 035470 | Smp 055200 | Smp 105680 | ||
| Smp 210360 | Smp 210370 | Smp 024580 | ||
| Smp 018760 | Smp 018750 | Smp 143430 | ||
| O-Glycan | 5 | Smp 149820 | Smp 057620 | Smp 015949 |
| Smp 005500 | Smp 139230 | |||
| Glycolipid | 2 | Smp 160210 | Smp 157080 | |
| GPI-anchor | 14 | Smp 154600 | Smp 136690 | Smp 145290 |
| Smp 155890 | Smp 155900 | Smp 017730 | ||
| Smp 046880 | Smp 163640 | Smp 152460 | ||
| Smp 035080 | Smp 128810 | Smp 177040 | ||
| Smp 053460 | Smp 021980 | |||
| GAG | 6 | Smp 178490 | Smp 083130 | Smp 124020 |
| Smp 075450 | Smp 134250 | Smp 210290 | ||
Grouped in database, see text for details.
Tally in text references a subset of genes (Ex: 3 β1-4GalNAcTs, 7 total GalNAcTs)
Listed in both glycosyltransferases and pathways.
Genes have redundancies, see text reference for details.
Denotes current gene annotations discussed in the text. Not an exhaustive list.
Tally does not account for splice variants.