Literature DB >> 25135973

DNA modifications in the mammalian brain.

Jaehoon Shin1, Guo-Li Ming2, Hongjun Song3.   

Abstract

DNA methylation is a crucial epigenetic mark in mammalian development, genomic imprinting, X-inactivation, chromosomal stability and suppressing parasitic DNA elements. DNA methylation in neurons has also been suggested to play important roles for mammalian neuronal functions, and learning and memory. In this review, we first summarize recent discoveries and fundamental principles of DNA modifications in the general epigenetics field. We then describe the profiles of different DNA modifications in the mammalian brain genome. Finally, we discuss roles of DNA modifications in mammalian brain development and function.
© 2014 The Author(s) Published by the Royal Society. All rights reserved.

Entities:  

Keywords:  5-hydroxymethylcytosine; 5-methylcytosine; DNA methylation; learning and memory

Mesh：

Substances：

Year:  2014        PMID： 25135973      PMCID： PMC4142033          DOI： 10.1098/rstb.2013.0512

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN： 0962-8436            Impact factor:   6.237


  87 in total

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Journal:  Neuron       Date:  2007-03-15       Impact factor: 17.173

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Authors:  Yu-Fei He; Bin-Zhong Li; Zheng Li; Peng Liu; Yang Wang; Qingyu Tang; Jianping Ding; Yingying Jia; Zhangcheng Chen; Lin Li; Yan Sun; Xiuxue Li; Qing Dai; Chun-Xiao Song; Kangling Zhang; Chuan He; Guo-Liang Xu
Journal:  Science       Date:  2011-08-04       Impact factor: 47.728

3.  A mouse Mecp2-null mutation causes neurological symptoms that mimic Rett syndrome.

Authors:  J Guy; B Hendrich; M Holmes; J E Martin; A Bird
Journal:  Nat Genet       Date:  2001-03       Impact factor: 38.330

4.  Non-CpG methylation is prevalent in embryonic stem cells and may be mediated by DNA methyltransferase 3a.

Authors:  B H Ramsahoye; D Biniszkiewicz; F Lyko; V Clark; A P Bird; R Jaenisch
Journal:  Proc Natl Acad Sci U S A       Date:  2000-05-09       Impact factor: 11.205

5.  DNA ticketing theory of memory.

Authors:  J S Griffith; H R Mahler
Journal:  Nature       Date:  1969-08-09       Impact factor: 49.962

6.  Dnmt1 and Dnmt3a maintain DNA methylation and regulate synaptic function in adult forebrain neurons.

Authors:  Jian Feng; Yu Zhou; Susan L Campbell; Thuc Le; En Li; J David Sweatt; Alcino J Silva; Guoping Fan
Journal:  Nat Neurosci       Date:  2010-03-14       Impact factor: 24.884

7.  Dynamic expression of de novo DNA methyltransferases Dnmt3a and Dnmt3b in the central nervous system.

Authors:  Jian Feng; Hua Chang; En Li; Guoping Fan
Journal:  J Neurosci Res       Date:  2005-03-15       Impact factor: 4.164

8.  DNA methylation and the frequency of CpG in animal DNA.

Authors:  A P Bird
Journal:  Nucleic Acids Res       Date:  1980-04-11       Impact factor: 16.971

9.  Puromycin effect on successive phases of memory storage.

Authors:  S H Barondes; H D Cohen
Journal:  Science       Date:  1966-02-04       Impact factor: 47.728

10.  Expression of DNA methyltransferase gene in mature and immature neurons as well as proliferating cells in mice.

Authors:  K Goto; M Numata; J I Komura; T Ono; T H Bestor; H Kondo
Journal:  Differentiation       Date:  1994-04       Impact factor: 3.880
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  17 in total

1.  An Intrinsic Epigenetic Barrier for Functional Axon Regeneration.

Authors:  Yi-Lan Weng; Ran An; Jessica Cassin; Jessica Joseph; Ruifa Mi; Chen Wang; Chun Zhong; Seung-Gi Jin; Gerd P Pfeifer; Alfonso Bellacosa; Xinzhong Dong; Ahmet Hoke; Zhigang He; Hongjun Song; Guo-Li Ming
Journal:  Neuron       Date:  2017-04-19       Impact factor: 17.173

Review 2.  Decoding the non-coding genome: elucidating genetic risk outside the coding genome.

Authors:  C L Barr; V L Misener
Journal:  Genes Brain Behav       Date:  2016-01-04       Impact factor: 3.449

3.  Introduction.

Authors:  Lawrence Edelstein; John Smythies; Denis Noble
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2014-09-26       Impact factor: 6.237

4.  Methyl-CpG-Binding Protein MBD1 Regulates Neuronal Lineage Commitment through Maintaining Adult Neural Stem Cell Identity.

Authors:  Emily M Jobe; Yu Gao; Brian E Eisinger; Janessa K Mladucky; Charles C Giuliani; Laurel E Kelnhofer; Xinyu Zhao
Journal:  J Neurosci       Date:  2017-01-18       Impact factor: 6.167

5.  Developmental and Thyroid Hormone Regulation of the DNA Methyltransferase 3a Gene in Xenopus Tadpoles.

Authors:  Yasuhiro Kyono; Laurent M Sachs; Patrice Bilesimo; Luan Wen; Robert J Denver
Journal:  Endocrinology       Date:  2016-10-25       Impact factor: 4.736

Review 6.  Non-CG Methylation in the Human Genome.

Authors:  Yupeng He; Joseph R Ecker
Journal:  Annu Rev Genomics Hum Genet       Date:  2015-06-04       Impact factor: 8.929

7.  Liganded Thyroid Hormone Receptors Transactivate the DNA Methyltransferase 3a Gene in Mouse Neuronal Cells.

Authors:  Yasuhiro Kyono; Arasakumar Subramani; Preeti Ramadoss; Anthony N Hollenberg; Ronald M Bonett; Robert J Denver
Journal:  Endocrinology       Date:  2016-07-07       Impact factor: 4.736

8.  DNA methylation dynamics underlie metamorphic gene regulation programs in Xenopus tadpole brain.

Authors:  Yasuhiro Kyono; Samhitha Raj; Christopher J Sifuentes; Nicolas Buisine; Laurent Sachs; Robert J Denver
Journal:  Dev Biol       Date:  2020-03-31       Impact factor: 3.582

9.  DNA Methyltransferase 3A Is Involved in the Sustained Effects of Chronic Stress on Synaptic Functions and Behaviors.

Authors:  Jing Wei; Jia Cheng; Nicholas J Waddell; Zi-Jun Wang; Xiaodong Pang; Qing Cao; Aiyi Liu; Javed M Chitaman; Kristen Abreu; Rahul Singh Jasrotia; Lara J Duffney; Jinfeng Zhang; David M Dietz; Jian Feng; Zhen Yan
Journal:  Cereb Cortex       Date:  2021-03-05       Impact factor: 5.357

10.  DNA methylation: A mechanism for sustained alteration of KIR4.1 expression following central nervous system insult.

Authors:  Jessica L Boni; Uri Kahanovitch; Sinifunanya E Nwaobi; Candace L Floyd; Michelle L Olsen
Journal:  Glia       Date:  2020-02-18       Impact factor: 7.452
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