Literature DB >> 25134534

Genome-wide association study identifies new susceptibility loci for epithelial ovarian cancer in Han Chinese women.

Kexin Chen1, Hongxia Ma2, Lian Li1, Rongyu Zang3, Cheng Wang4, Fengju Song5, Tingyan Shi6, Dianke Yu7, Ming Yang8, Wenqiong Xue9, Juncheng Dai4, Shuang Li10, Hong Zheng5, Chen Wu7, Ying Zhang9, Xiaohua Wu11, Dake Li12, Fengxia Xue13, Haixin Li5, Zhi Jiang14, Jibin Liu15, Yuexin Liu16, Pei Li5, Wen Tan7, Jing Han4, Jiang Jie4, Quan Hao17, Zhibin Hu4, Dongxin Lin7, Ding Ma10, Weihua Jia9, Hongbing Shen4, Qingyi Wei18.   

Abstract

Ovarian cancer is the leading cause of death from gynaecological malignancies worldwide. Here we perform a three-stage genome-wide association study (GWAS) in Han Chinese women to identify risk genetic variants for epithelial ovarian cancer (EOC). We scan 900,015 single-nucleotide polymorphisms (SNPs) in 1,057 EOC cases and 1,191 controls in stage I, and replicate 41 SNPs (P(meta)<10(-4)) in 960 EOC cases and 1,799 controls (stage II), and an additional 492 EOC cases and 1,004 controls (stage III). Finally, we identify two EOC susceptibility loci at 9q22.33 (rs1413299 in COL15A1, P(meta) = 1.88 × 10(-8)) and 10p11.21 (rs1192691 near ANKRD30A, P(meta) = 2.62 × 10(-8)), and two consistently replicated loci at 12q14.2 (rs11175194 in SRGAP1, P(meta) = 1.14 × 10(-7)) and 9q34.2 (rs633862 near ABO and SURF6, P(meta) = 8.57 × 10(-7)) (P<0.05 in all three stages). These results may advance our understanding of genetic susceptibility to EOC.

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Year:  2014        PMID: 25134534     DOI: 10.1038/ncomms5682

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  32 in total

Review 1.  Genome-Wide Association Studies of Cancer in Diverse Populations.

Authors:  Sungshim L Park; Iona Cheng; Christopher A Haiman
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2017-06-21       Impact factor: 4.254

2.  Involvement of the specific nucleolar protein SURF6 in regulation of proliferation and ribosome biogenesis in mouse NIH/3T3 fibroblasts.

Authors:  Anastasiia Moraleva; Charalambos Magoulas; Mikhail Polzikov; Sabine Hacot; Hichem C Mertani; Jean-Jacques Diaz; Olga Zatsepina
Journal:  Cell Cycle       Date:  2017-09-05       Impact factor: 4.534

3.  Cell-type-specific enrichment of risk-associated regulatory elements at ovarian cancer susceptibility loci.

Authors:  Simon G Coetzee; Howard C Shen; Dennis J Hazelett; Kate Lawrenson; Karoline Kuchenbaecker; Jonathan Tyrer; Suhn K Rhie; Keren Levanon; Alison Karst; Ronny Drapkin; Susan J Ramus; Fergus J Couch; Kenneth Offit; Georgia Chenevix-Trench; Alvaro N A Monteiro; Antonis Antoniou; Matthew Freedman; Gerhard A Coetzee; Paul D P Pharoah; Houtan Noushmehr; Simon A Gayther
Journal:  Hum Mol Genet       Date:  2015-03-24       Impact factor: 6.150

4.  Estimation of heritability for nine common cancers using data from genome-wide association studies in Chinese population.

Authors:  Juncheng Dai; Wei Shen; Wanqing Wen; Jiang Chang; Tongmin Wang; Haitao Chen; Guangfu Jin; Hongxia Ma; Chen Wu; Lian Li; Fengju Song; YiXin Zeng; Yue Jiang; Jiaping Chen; Cheng Wang; Meng Zhu; Wen Zhou; Jiangbo Du; Yongbing Xiang; Xiao-Ou Shu; Zhibin Hu; Weiping Zhou; Kexin Chen; Jianfeng Xu; Weihua Jia; Dongxin Lin; Wei Zheng; Hongbing Shen
Journal:  Int J Cancer       Date:  2016-10-11       Impact factor: 7.396

5.  Downregulation of SASH1 correlates with tumor progression and poor prognosis in ovarian carcinoma.

Authors:  Xiaoyan Ren; Yifei Liu; Yumei Tao; Guoxiang Zhu; Meilan Pei; Jianguo Zhang; Jian Liu
Journal:  Oncol Lett       Date:  2016-03-17       Impact factor: 2.967

Review 6.  DNA methylation changes in epithelial ovarian cancer histotypes.

Authors:  Madalene A Earp; Julie M Cunningham
Journal:  Genomics       Date:  2015-09-10       Impact factor: 5.736

Review 7.  Ovarian Cancers: Genetic Abnormalities, Tumor Heterogeneity and Progression, Clonal Evolution and Cancer Stem Cells.

Authors:  Ugo Testa; Eleonora Petrucci; Luca Pasquini; Germana Castelli; Elvira Pelosi
Journal:  Medicines (Basel)       Date:  2018-02-01

8.  Genome-wide association studies identify susceptibility loci for epithelial ovarian cancer in east Asian women.

Authors:  Kate Lawrenson; Fengju Song; Dennis J Hazelett; Siddhartha P Kar; Jonathan Tyrer; Catherine M Phelan; Rosario I Corona; Norma I Rodríguez-Malavé; Ji-Hei Seo; Emily Adler; Simon G Coetzee; Felipe Segato; Marcos A S Fonseca; Christopher I Amos; Michael E Carney; Georgia Chenevix-Trench; Jiyeob Choi; Jennifer A Doherty; Weihua Jia; Gang J Jin; Byoung-Gie Kim; Nhu D Le; Juyeon Lee; Lian Li; Boon K Lim; Noor A Adenan; Mika Mizuno; Boyoung Park; Celeste L Pearce; Kang Shan; Yongyong Shi; Xiao-Ou Shu; Weiva Sieh; Pamela J Thompson; Lynne R Wilkens; Qingyi Wei; Yin L Woo; Li Yan; Beth Y Karlan; Matthew L Freedman; Houtan Noushmehr; Ellen L Goode; Andrew Berchuck; Thomas A Sellers; Soo-Hwang Teo; Wei Zheng; Keitaro Matsuo; Sue Park; Kexin Chen; Paul D P Pharoah; Simon A Gayther; Marc T Goodman
Journal:  Gynecol Oncol       Date:  2019-03-19       Impact factor: 5.482

9.  Functional Analysis and Fine Mapping of the 9p22.2 Ovarian Cancer Susceptibility Locus.

Authors:  Melissa A Buckley; Nicholas T Woods; Jonathan P Tyrer; Gustavo Mendoza-Fandiño; Kate Lawrenson; Dennis J Hazelett; Hamed S Najafabadi; Anxhela Gjyshi; Renato S Carvalho; Paulo C Lyra; Simon G Coetzee; Howard C Shen; Ally W Yang; Madalene A Earp; Sean J Yoder; Harvey Risch; Georgia Chenevix-Trench; Susan J Ramus; Catherine M Phelan; Gerhard A Coetzee; Houtan Noushmehr; Timothy R Hughes; Thomas A Sellers; Ellen L Goode; Paul D Pharoah; Simon A Gayther; Alvaro N A Monteiro
Journal:  Cancer Res       Date:  2018-11-28       Impact factor: 12.701

10.  Contribution of Germline Mutations in the RAD51B, RAD51C, and RAD51D Genes to Ovarian Cancer in the Population.

Authors:  Honglin Song; Ed Dicks; Susan J Ramus; Jonathan P Tyrer; Maria P Intermaggio; Jane Hayward; Christopher K Edlund; David Conti; Patricia Harrington; Lindsay Fraser; Susan Philpott; Christopher Anderson; Adam Rosenthal; Aleksandra Gentry-Maharaj; David D Bowtell; Kathryn Alsop; Mine S Cicek; Julie M Cunningham; Brooke L Fridley; Jennifer Alsop; Mercedes Jimenez-Linan; Estrid Høgdall; Claus K Høgdall; Allan Jensen; Susanne Krüger Kjaer; Jan Lubiński; Tomasz Huzarski; Anna Jakubowska; Jacek Gronwald; Samantha Poblete; Shashi Lele; Lara Sucheston-Campbell; Kirsten B Moysich; Kunle Odunsi; Ellen L Goode; Usha Menon; Ian J Jacobs; Simon A Gayther; Paul D P Pharoah
Journal:  J Clin Oncol       Date:  2015-08-10       Impact factor: 44.544

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