Literature DB >> 25124808

8-Azapurines as isosteric purine fluorescent probes for nucleic acid and enzymatic research.

Jacek Wierzchowski1, Jan M Antosiewicz, David Shugar.   

Abstract

The 8-azapurines, and their 7-deaza and 9-deaza congeners, represent a unique class of isosteric (isomorphic) analogues of the natural purines, frequently capable of substituting for the latter in many biochemical processes. Particularly interesting is their propensity to exhibit pH-dependent room-temperature fluorescence in aqueous medium, and in non-polar media. We herein review the physico-chemical properties of this class of compounds, with particular emphasis on the fluorescence emission properties of their neutral and/or ionic species, which has led to their widespread use as fluorescent probes in enzymology, including enzymes involved in purine metabolism, agonists/antagonists of adenosine receptors, mechanisms of catalytic RNAs, RNA editing, etc. They are also exceptionally useful fluorescent probes for analytical and clinical applications in crude cell homogenates.

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Year:  2014        PMID: 25124808     DOI: 10.1039/c4mb00233d

Source DB:  PubMed          Journal:  Mol Biosyst        ISSN: 1742-2051


  11 in total

1.  Emissive Synthetic Cofactors: Enzymatic Interconversions of tz A Analogues of ATP, NAD+ , NADH, NADP+ , and NADPH.

Authors:  François Hallé; Andrea Fin; Alexander R Rovira; Yitzhak Tor
Journal:  Angew Chem Int Ed Engl       Date:  2017-12-21       Impact factor: 15.336

2.  Emissive Synthetic Cofactors: An Isomorphic, Isofunctional, and Responsive NAD+ Analogue.

Authors:  Alexander R Rovira; Andrea Fin; Yitzhak Tor
Journal:  J Am Chem Soc       Date:  2017-10-27       Impact factor: 15.419

3.  A New Variant of Emissive RNA Alphabets.

Authors:  Paul T Ludford; Shenghua Yang; Marcela S Bucardo; Yitzhak Tor
Journal:  Chemistry       Date:  2022-02-02       Impact factor: 5.236

4.  Chemical Mutagenesis of an Emissive RNA Alphabet.

Authors:  Alexander R Rovira; Andrea Fin; Yitzhak Tor
Journal:  J Am Chem Soc       Date:  2015-11-16       Impact factor: 15.419

5.  A simplified characterization of S-adenosyl-l-methionine-consuming enzymes with 1-Step EZ-MTase: a universal and straightforward coupled-assay for in vitro and in vivo setting.

Authors:  Emmanuel S Burgos; Ryan O Walters; Derek M Huffman; David Shechter
Journal:  Chem Sci       Date:  2017-07-27       Impact factor: 9.825

6.  Expanding a fluorescent RNA alphabet: synthesis, photophysics and utility of isothiazole-derived purine nucleoside surrogates.

Authors:  Alexander R Rovira; Andrea Fin; Yitzhak Tor
Journal:  Chem Sci       Date:  2017-01-30       Impact factor: 9.825

7.  Site-Selective Ribosylation of Fluorescent Nucleobase Analogs Using Purine-Nucleoside Phosphorylase as a Catalyst: Effects of Point Mutations.

Authors:  Alicja Stachelska-Wierzchowska; Jacek Wierzchowski; Agnieszka Bzowska; Beata Wielgus-Kutrowska
Journal:  Molecules       Date:  2015-12-28       Impact factor: 4.411

8.  Tricyclic Nucleobase Analogs and Their Ribosides as Substrates and Inhibitors of Purine-Nucleoside Phosphorylases III. Aminopurine Derivatives.

Authors:  Alicja Stachelska-Wierzchowska; Jacek Wierzchowski; Michał Górka; Agnieszka Bzowska; Ryszard Stolarski; Beata Wielgus-Kutrowska
Journal:  Molecules       Date:  2020-02-05       Impact factor: 4.411

9.  Real-Time Monitoring of Human Guanine Deaminase Activity by an Emissive Guanine Analog.

Authors:  Marcela S Bucardo; You Wu; Paul T Ludford; Yao Li; Andrea Fin; Yitzhak Tor
Journal:  ACS Chem Biol       Date:  2021-06-30       Impact factor: 4.634

10.  Excited-State Proton Transfer in 8-Azapurines I: A Kinetic Analysis of 8-Azaxanthine Fluorescence.

Authors:  Jacek Wierzchowski; Bogdan Smyk
Journal:  Molecules       Date:  2020-06-12       Impact factor: 4.411

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