| Literature DB >> 25117914 |
Ronald G Kaptein, Daphne Wezenberg, Trienke IJmker, Han Houdijk, Peter J Beek, Claudine J C Lamoth, Andreas Daffertshofer1.
Abstract
BACKGROUND: Identifying features for gait classification is a formidable problem. The number of candidate measures is legion. This calls for proper, objective criteria when ranking their relevance.Entities:
Mesh:
Year: 2014 PMID: 25117914 PMCID: PMC4245743 DOI: 10.1186/1743-0003-11-120
Source DB: PubMed Journal: J Neuroeng Rehabil ISSN: 1743-0003 Impact factor: 4.262
Figure 1Illustration of template matching procedure. The algorithm starts with an initial estimate of events in a signal (panel a). Around each event an epoch (window) is defined (grey shading in panel a), and the epochs are averaged to define a template (panel b). This template is compared with every epoch using the corresponding cross-correlation function. In the next step, events are shifted by the time lag of maximal cross-correlation (panel c). These events then serve as a new initial estimate (panel a). This procedure is repeated until convergence. Panels d &e show the final events and template.
Figure 2Schematic overview of the statistical assessment. The left panel depicts that in the first alternative all the measures are first analyzed using a conventional ANOVA. This extracts the subset of most significant measures, which is subsequently assessed using a multinomial logistic regression. This regression yields a certain ordering of measures-of-interest. The right panel shows the second alternative, in which the selection plus ordering is realized via a PLS regression; see the text for more details.
Measures from the participants with stroke that show a significant condition effect
| Modality | Measure | Condition |
|---|---|---|
| Metabolism | Mean | 0.00007 (0.72) |
| Mean | 0.00005 (0.73) | |
| Mean | 0.0002 (0.66) |
The effect size (partial η 2) is indicated between brackets. The significance level after the Bonferroni correction was 0.0009.
Measures from the participants with an amputation that showed a significant effect
| Modality | Measure | Condition | Group | Interaction |
|---|---|---|---|---|
| Force plate | Mean step width | - | 0.00004 (0.95) | - |
| Mean stride duration | - | 0.0004 (0.94) | - | |
| CV of stride duration | - | 0.0002 (0.66) [1] | - | |
| Template mean (x) | - | 0.0003 (0.34) [1] | - | |
| Mean variance events (z) | - | 0.0004 (0.77) | - | |
| SE of sample entropy (y) | - | 0.00001 (0.94) | - | |
| SE of sample entropy (z) | - | 0.0002 (0.75) | - | |
| Sample entropy of phase (z) | - | 0.0004 (0.98) | - | |
| SE of sample entropy of phase (y) | - | 0.00001 (0.97) | - | |
| EMG | Sample entropy (S) | - | 0.0001 (0.87) | - |
| Lyapunov exponent (G) | - | 0.0004 (0.50) | - | |
| Accelerometer | Sample entropy (x) | - | 0.00003 (0.69) | - |
| PCA eigenvalues (1) | - | 0.0002 (0.48) | - | |
| Metabolism | Mean | 0.0002 (0.32) | - | - |
| Mean | 0.0002 (0.32) | - | - | |
| Mean | - | < 0.00001 (0.96) | - |
The effect size (partial η 2) is indicated between brackets. If a leg specific measure such as stride length was only significant for one leg, this is indicated between square brackets; 1 stands for the affected side, 2 for the unaffected side (see text). If nothing is indicated, both legs showed a significant effect, and the reported p value is for the affected side. Note that the significance level is 0.0005 after the Bonferroni correction.
-coefficients of the logistic regression for study A, using the 7 measures with the highest -value (2nd column)
| Measure |
|
|
|
| || |
|---|---|---|---|---|---|
| Metabolism mean | 0.00007 | -5.2* | -4.1* | -1.1 | 6.7 |
| Accelerometer lyapunov exponent (y) | 0.01 | -2.0 | -4.6* | 2.6 | 5.7 |
| Metabolism mean | 0.02 | 3.5 | 3.4* | 0.1 | 4.8 |
| Metabolism mean | 0.0002 | 2.5 | -1.3 | 3.8 | 4.7 |
| Metabolism mean | 0.00005 | 0.5 | 3.4 | -2.9 | 4.5 |
| Accelerometer lyapunov of PC (1) | 0.02 | -2.3 | 0.5 | -2.8 | 3.6 |
| Force plate DFA- | 0.02 | -2.6* | -1.3* | -1.3 | 3.2 |
The significance level for these p-values is 0.0009 after the Bonferroni correction. Significant coefficients (p<0.05) are indicated with an *. For β 12 and ||β|| no significance could be indicated because these were calculated after the regression. Note that in the β-coefficients, 1 indicates the supported preferred speed condition, 2 indicates the supported enforced speed condition and 3 indicates the unsupported preferred speed condition.
-coefficients of the logistic regression for study B, using the relative difference between non-Stroop and Stroop results as measure
| Measure |
|
|
|
|
| || |
|---|---|---|---|---|---|---|
| Force plate SE of sample entropy (y) | 0.02 | 0.03 | -2.8 | -0.6 | -2.1 | 3.5 |
| EMG sample entropy (TA) | 0.006 | 0.005 | 0.3 | -1.8 | 2.1 | 2.8 |
| Force plate DFA- | 0.09 | 0.1 | 1.2* | -0.7 | 1.9 | 2.4 |
| EMG SE of sample entropy of phase (VM) | 0.05 | 0.7 | -1.2 | 0.6 | -1.8 | 2.3 |
| Metabolism mean (HR) | 0.07 | 0.08 | -1.5 | -0.2 | -1.3 | 2.0 |
| EMG PCA eigenvalues (5) | 0.07 | 0.02 | -0.8 | -1.3 | 0.5 | 1.6 |
| Force plate mean template (z) | 0.07 | 0.4 | 0.7 | 0.8 | -0.1 | 1.1 |
The 7 measures with the highest p-value were included. The second column (p 1) shows the p-value for the one-way ANOVA using the alternative measure, the third column (p 2) shows the p-values for the interaction effect of the two-way ANOVA. Note that in both cases, the significance level was 0.0004 after the Bonferroni correction. Significant coefficients (p<0.05) are indicated with an *. For β 12 and ||β|| no significance could be indicated because these were calculated after the regression. Note that for the β-coefficients, 1 indicates the transtibial amputee group, 2 the transfemoral group and 3 the control group.
Regression coefficients of the PLS regression for study A
| Measure |
|
|
| || |
|---|---|---|---|---|
| Force plate DFA- | 0.41 | -0.25 | -0.16 | 0.51 |
| Force plate DFA- | -0.14 | -0.22 | 0.36 | 0.44 |
| Force plate mean template (z) | 0.14 | 0.15 | -0.29 | 0.36 |
| Force plate DFA- | 0.25 | -0.25 | -0.01 | 0.35 |
| Metabolism cv of RER | -0.11 | -0.17 | 0.28 | 0.35 |
| Force plate SE of sample entropy (z) | 0.07 | -0.24 | 0.17 | 0.30 |
| Force plate mean event position (z) | 0.01 | -0.21 | 0.19 | 0.29 |
The number of components included in the regression was set to 7. β 1 indicates the supported preferred speed condition, β 2 the supported enforced speed condition and β 3 the unsupported preferred speed condition.
Regression coefficients of the PLS regression for study B
| Measure |
|
|
| || |
|---|---|---|---|---|
| Force plate SE of sample entropy (y) | 0.21 | -0.21 | -0.02 | 0.29 |
| Force plate DFA- | -0.17 | 0.23 | -0.05 | 0.29 |
| EMG SE of sample entropy (VM) | -0.16 | 0.22 | -0.06 | 0.28 |
| Force plate sample entropy (y) | 0.19 | -0.09 | -0.14 | 0.25 |
| Accelerometer sample entropy (z) | 0.17 | -0.05 | -0.15 | 0.24 |
| EMG PCA eigenvalues (5) | 0.16 | -0.07 | -0.11 | 0.21 |
| EMG SE of sample entropy of phase (VM) | 0.01 | -0.14 | 0.14 | 0.20 |
| EMG sample entropy (TA) | 0.13 | -0.02 | -0.14 | 0.19 |
| EMG PCA eigenvalues (1) | -0.11 | -0.01 | 0.15 | 0.19 |
| EMG SE of sample entropy of phase (S) | 0.12 | -0.14 | 0.02 | 0.19 |
The number of components included in the regression was set to 7. β 1 indicates the control group, β 2 the transtibial amputee group and β 3 transfemoral group.