Literature DB >> 25115120

Definitive assignment by multigenome analysis of the gammaproteobacterial genus Thermithiobacillus to the class Acidithiobacillia.

Corey M Hudson, Kelly P Williams, Donovan P Kelly.   

Abstract

The class Acidithiobacillia was established using multiprotein phylogenetic analysis of all the available genomes of the genus Acidithiobacillus (comprising Family I, the Acidithiobacillaceae, of the Acidithiobacillales, the order created for Bergey's Manual of Systematic Bacteriology), and for representative genomes of all available bacterial orders. The Acidithiobacillales contain a second family, the Thermithiobacillaceae, represented by Thermithiobacillus tepidarius, and created on the basis of nearest neighbour 16S ribosomal RNA gene sequence similarities. This could not be included in the original multiprotein analysis as no genome sequence for Thermithio bacillus was available. The publication of the genome sequence of Thermithiobacillus tepidarius in 2013 has enabled phylogenetic assessment of this organism by comparative multigenome analysis. This shows definitively that Thermithiobacillus is a member of the class Acidithiobacillia, distinct from the Acidithiobacillus genus, and confirms it to represent a second family within the Acidithiobacillia.

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Year:  2014        PMID: 25115120

Source DB:  PubMed          Journal:  Pol J Microbiol        ISSN: 1733-1331


  6 in total

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Journal:  Protoplasma       Date:  2020-01-03       Impact factor: 3.356

2.  Bioinformatic Analyses of Unique (Orphan) Core Genes of the Genus Acidithiobacillus: Functional Inferences and Use As Molecular Probes for Genomic and Metagenomic/Transcriptomic Interrogation.

Authors:  Carolina González; Marcelo Lazcano; Jorge Valdés; David S Holmes
Journal:  Front Microbiol       Date:  2016-12-27       Impact factor: 5.640

3.  Molecular Systematics of the Genus Acidithiobacillus: Insights into the Phylogenetic Structure and Diversification of the Taxon.

Authors:  Harold Nuñez; Ana Moya-Beltrán; Paulo C Covarrubias; Francisco Issotta; Juan Pablo Cárdenas; Mónica González; Joaquín Atavales; Lillian G Acuña; D Barrie Johnson; Raquel Quatrini
Journal:  Front Microbiol       Date:  2017-01-19       Impact factor: 5.640

4.  Permanent draft genome of Thiobacillus thioparus DSM 505T, an obligately chemolithoautotrophic member of the Betaproteobacteria.

Authors:  Lee P Hutt; Marcel Huntemann; Alicia Clum; Manoj Pillay; Krishnaveni Palaniappan; Neha Varghese; Natalia Mikhailova; Dimitrios Stamatis; Tatiparthi Reddy; Chris Daum; Nicole Shapiro; Natalia Ivanova; Nikos Kyrpides; Tanja Woyke; Rich Boden
Journal:  Stand Genomic Sci       Date:  2017-01-19

5.  Essential Role of σ Factor RpoF in Flagellar Biosynthesis and Flagella-Mediated Motility of Acidithiobacillus caldus.

Authors:  Chun-Long Yang; Xian-Ke Chen; Rui Wang; Jian-Qiang Lin; Xiang-Mei Liu; Xin Pang; Cheng-Jia Zhang; Jian-Qun Lin; Lin-Xu Chen
Journal:  Front Microbiol       Date:  2019-05-24       Impact factor: 5.640

6.  Genomic evolution of the class Acidithiobacillia: deep-branching Proteobacteria living in extreme acidic conditions.

Authors:  Ana Moya-Beltrán; Simón Beard; Camila Rojas-Villalobos; Francisco Issotta; Yasna Gallardo; Ricardo Ulloa; Alejandra Giaveno; Mauro Degli Esposti; D Barrie Johnson; Raquel Quatrini
Journal:  ISME J       Date:  2021-05-18       Impact factor: 10.302

  6 in total

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