Literature DB >> 25100137

The design of RNA binders: targeting the HIV replication cycle as a case study.

Aurélie Blond1, Eric Ennifar, Carine Tisné, Laurent Micouin.   

Abstract

The human immunodeficiency virus 1 (HIV-1) replication cycle is finely tuned with many important steps involving RNA-RNA or protein-RNA interactions, all of them being potential targets for the development of new antiviral compounds. This cycle can also be considered as a good benchmark for the evaluation of early-stage strategies aiming at designing drugs that bind to RNA, with the possibility to correlate in vitro activities with antiviral properties. In this review, we highlight different approaches developed to interfere with four important steps of the HIV-1 replication cycle: the early stage of reverse transcription, the transactivation of viral transcription, the nuclear export of partially spliced transcripts and the dimerization step.
© 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  RNA recognition; antiviral agents; drug design; human immunodeficiency virus; new targets

Mesh:

Substances:

Year:  2014        PMID: 25100137     DOI: 10.1002/cmdc.201402259

Source DB:  PubMed          Journal:  ChemMedChem        ISSN: 1860-7179            Impact factor:   3.466


  8 in total

1.  Driving factors in amiloride recognition of HIV RNA targets.

Authors:  Neeraj N Patwardhan; Zhengguo Cai; Aline Umuhire Juru; Amanda E Hargrove
Journal:  Org Biomol Chem       Date:  2019-10-30       Impact factor: 3.876

2.  Development of Small Molecules with a Noncanonical Binding Mode to HIV-1 Trans Activation Response (TAR) RNA.

Authors:  Fardokht A Abulwerdi; Matthew D Shortridge; Joanna Sztuba-Solinska; Robert Wilson; Stuart F J Le Grice; Gabriele Varani; John S Schneekloth
Journal:  J Med Chem       Date:  2016-12-02       Impact factor: 7.446

Review 3.  Synthetic small-molecule RNA ligands: future prospects as therapeutic agents.

Authors:  A Di Giorgio; M Duca
Journal:  Medchemcomm       Date:  2019-04-30       Impact factor: 3.597

4.  Synthesis of 9-Substituted Triptycene Building Blocks for Solid-Phase Diversification and Nucleic Acid Junction Targeting.

Authors:  Ina Yoon; Sung-Eun Suh; Stephanie A Barros; David M Chenoweth
Journal:  Org Lett       Date:  2016-02-17       Impact factor: 6.005

5.  Amiloride as a new RNA-binding scaffold with activity against HIV-1 TAR.

Authors:  Neeraj N Patwardhan; Laura R Ganser; Gary J Kapral; Christopher S Eubanks; Janghyun Lee; Bharathwaj Sathyamoorthy; Hashim M Al-Hashimi; Amanda E Hargrove
Journal:  Medchemcomm       Date:  2017-03-15       Impact factor: 3.597

Review 6.  Retroviral RNA Dimerization: From Structure to Functions.

Authors:  Noé Dubois; Roland Marquet; Jean-Christophe Paillart; Serena Bernacchi
Journal:  Front Microbiol       Date:  2018-03-22       Impact factor: 5.640

Review 7.  Small molecules targeting viral RNA.

Authors:  Thomas Hermann
Journal:  Wiley Interdiscip Rev RNA       Date:  2016-06-16       Impact factor: 9.957

8.  Native mass spectrometry reveals the initial binding events of HIV-1 rev to RRE stem II RNA.

Authors:  Eva-Maria Schneeberger; Matthias Halper; Michael Palasser; Sarah Viola Heel; Jovana Vušurović; Raphael Plangger; Michael Juen; Christoph Kreutz; Kathrin Breuker
Journal:  Nat Commun       Date:  2020-11-13       Impact factor: 14.919

  8 in total

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