Literature DB >> 25096577

Insights into the biosynthesis and assembly of cryptophycean phycobiliproteins.

Kristina E Overkamp1, Raphael Gasper2, Klaus Kock3, Christian Herrmann3, Eckhard Hofmann2, Nicole Frankenberg-Dinkel4.   

Abstract

Phycobiliproteins are employed by cyanobacteria, red algae, glaucophytes, and cryptophytes for light-harvesting and consist of apoproteins covalently associated with open-chain tetrapyrrole chromophores. Although the majority of organisms assemble the individual phycobiliproteins into larger aggregates called phycobilisomes, members of the cryptophytes use a single type of phycobiliprotein that is localized in the thylakoid lumen. The cryptophyte Guillardia theta (Gt) uses phycoerythrin PE545 utilizing the uncommon chromophore 15,16-dihydrobiliverdin (DHBV) in addition to phycoerythrobilin (PEB). Both the biosynthesis and the attachment of chromophores to the apophycobiliprotein have not yet been investigated for cryptophytes. In this study, we identified and characterized enzymes involved in PEB biosynthesis. In addition, we present the first in-depth biochemical characterization of a eukaryotic phycobiliprotein lyase (GtCPES). Plastid-encoded HO (GtHo) was shown to convert heme into biliverdin IXα providing the substrate with a putative nucleus-encoded DHBV:ferredoxin oxidoreductase (GtPEBA). A PEB:ferredoxin oxidoreductase (GtPEBB) was found to convert DHBV to PEB, which is the substrate for the phycobiliprotein lyase GtCPES. The x-ray structure of GtCPES was solved at 2.0 Å revealing a 10-stranded β-barrel with a modified lipocalin fold. GtCPES is an S-type lyase specific for binding of phycobilins with reduced C15=C16 double bonds (DHBV and PEB). Site-directed mutagenesis identified residues Glu-136 and Arg-146 involved in phycobilin binding. Based on the crystal structure, a model for the interaction of GtCPES with the apophycobiliprotein CpeB is proposed and discussed.
© 2014 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  Algae; Bilin; Biosynthesis; Chromophore; Crystal Structure; Light Harvesting; Photosynthetic Pigment; Protein Assembly; Tetrapyrrole

Mesh:

Substances:

Year:  2014        PMID: 25096577      PMCID: PMC4175312          DOI: 10.1074/jbc.M114.591131

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  67 in total

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Journal:  Biochim Biophys Acta       Date:  2005-01-07

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4.  Biosynthesis of cyanobacterial phycobiliproteins in Escherichia coli: chromophorylation efficiency and specificity of all bilin lyases from Synechococcus sp. strain PCC 7002.

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10.  CyanoLyase: a database of phycobilin lyase sequences, motifs and functions.

Authors:  Anthony Bretaudeau; François Coste; Florian Humily; Laurence Garczarek; Gildas Le Corguillé; Christophe Six; Morgane Ratin; Olivier Collin; Wendy M Schluchter; Frédéric Partensky
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1.  Structures and enzymatic mechanisms of phycobiliprotein lyases CpcE/F and PecE/F.

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2.  Distinct Features of Cyanophage-encoded T-type Phycobiliprotein Lyase ΦCpeT: THE ROLE OF AUXILIARY METABOLIC GENES.

Authors:  Raphael Gasper; Julia Schwach; Jana Hartmann; Andrea Holtkamp; Jessica Wiethaus; Natascha Riedel; Eckhard Hofmann; Nicole Frankenberg-Dinkel
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Review 3.  Recent advances in production, purification and applications of phycobiliproteins.

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Journal:  World J Biol Chem       Date:  2016-02-26

4.  Ferredoxin-dependent bilin reductases in eukaryotic algae: Ubiquity and diversity.

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5.  Crystal structure and molecular mechanism of an E/F type bilin lyase-isomerase.

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6.  Structure and mechanism of the phycobiliprotein lyase CpcT.

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7.  Adaptation to Blue Light in Marine Synechococcus Requires MpeU, an Enzyme with Similarity to Phycoerythrobilin Lyase Isomerases.

Authors:  Rania M Mahmoud; Joseph E Sanfilippo; Adam A Nguyen; Johann A Strnat; Frédéric Partensky; Laurence Garczarek; Nabil Abo El Kassem; David M Kehoe; Wendy M Schluchter
Journal:  Front Microbiol       Date:  2017-02-21       Impact factor: 5.640

8.  Crystal structure of the first eukaryotic bilin reductase GtPEBB reveals a flipped binding mode of dihydrobiliverdin.

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9.  Controllable Phycobilin Modification: An Alternative Photoacclimation Response in Cryptophyte Algae.

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  9 in total

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