| Literature DB >> 25093412 |
Jiayu Duan1, Jiao Lou1, Qing Zhang2, Juntao Ke1, Yanqi Qi2, Na Shen1, Beibei Zhu1, Rong Zhong1, Zhenling Wang1, Lifeng Liu1, Jing Wu1, Wei Wang2, Fangqi Gong2, Xiaoping Miao1.
Abstract
OBJECTIVES: Recent genome-wide association study found rs1801274, a functional single nucleotide polymorphism (SNP) in IgG receptor gene FCGR2A, was associated with increased risk of Kawasaki disease (KD). However, subsequent studies on the role of this SNP were limited and controversial.Entities:
Mesh:
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Year: 2014 PMID: 25093412 PMCID: PMC4122468 DOI: 10.1371/journal.pone.0103329
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
The characteristics of patients with Kawasaki disease and healthy controls in current study.
| Variables | Case (n = 428) | Control (n = 493) |
|
| Gender, N (%) | 0.997 | ||
| Male | 263 (61.45) | 303 (61.46) | |
| Female | 165 (38.55) | 190 (38.54) |
P value was calculated by χ2 test.
Polymorphism of rs1801274 of the FCGR2A gene in the KD patients and healthy controls in current study.
| Frequency | KD cases (%) | Controls (%) | OR | 95% CI |
|
| Genotype | |||||
| GG | 27 (6.37) | 52 (10.59) | Reference | Reference | 1 |
| GA | 185 (43.63) | 226 (46.03) | 1.58 | 0.96–2.62 | 0.075 |
| AA | 212 (50.00) | 213 (43.38) | 1.93 | 1.16–3.19 |
|
| Allelic model | — | — | 1.29 | 1.06–1.58 |
|
| Dominant model | — | — | 1.75 | 1.08–2.84 |
|
| Recessive model | — | — | 1.31 | 1.01–1.70 |
|
| Additive model | — | — | 1.31 | 1.01–1.61 |
|
Adjusted the effect of gender and age. KD, Kawasaki disease.
The values in bold indicate statistically significant (p<0.05).
Figure 1Flow chart of study selection.
Characteristics of the studies on rs1801274 polymorphisms and risk of Kawasaki disease included in the meta-analysis.
| First Author | Year | Country | Ethnicity | Study Method | Study Design | Genotyping | T/NT | Case/Control |
| ShoichiroTaniuchi | 2005 | Japan | Asian | CC | Replication | RFLP | 65/566 | |
| Maarten Biezeveld | 2006 | Netherlands | Caucasian | CC | Replication | PCR-Direct sequencing | 176/239 | |
| ChieaChuenKhor | 2011 | Singapore | European | CC | GWAS | IllumiaBeadChip | 405/6252 | |
| ChieaChuenKhor | 2011 | Singapore | Asian | CC | Replication | SequenomMassARRAY | 438/446 | |
| ChieaChuenKhor | 2011 | Singapore | Asian | CC | Replication | Taqman-PCR | 460/498 | |
| ChieaChuenKhor | 2011 | Singapore | Asian | CC | Replication | Taqman-PCR | 130/568 | |
| ChieaChuenKhor | 2011 | Singapore | Mixed | TDT | Replication | SequenomMassARRAY | 314/272 | |
| Yoshihiro Onouchi | 2012 | Japan | Asian | CC | GWAS | IlluminaBeadChip | 428/3379 | |
| Yoshihiro Onouchi | 2012 | Japan | Asian | CC | Replication | Invader Assay | 470/378 | |
| Yoshihiro Onouchi | 2012 | Japan | Asian | CC | Replication | Invader Assay | 284/569 | |
| Yu Xiao Ji | 2013 | China | Asian | CC | Replication | PCR-Direct sequencing | 35/25 | |
| Yuanlong Yan | 2013 | China | Asian | CC | Replication | Taqman-PCR | 358/815 | |
| Current study | 2013 | China | Asian | CC | Replication | Taqman-PCR | 428/493 |
Abbreviations: CC, Case Control; TDT, transmission/disequilibrium test; T, transmission; NT, non-transmission.
FCGR2A rs1801274 allele A and the risk of Kawasaki disease in meta-analysis.
| Study ID | A/G in cases | A/G in controls | Transmitted A | Non-transmitted A | OR (95% CI) |
| Taniuchi (2005) | 108/22 | 885/247 | — | — | 1.37 (0.85–2.21) |
| Biezeveld (2006) | 202/150 | 250/228 | — | — | 1.23 (0.93–1.62) |
| Khor (2011) | 616/260 | 559/333 | — | — | 1.41 (1.16–1.72) |
| Khor (2011) | 200/60 | 728/408 | — | — | 1.87 (1.37–2.55) |
| Khor (2011) | 726/194 | 757/239 | — | — | 1.18 (0.95–1.46) |
| Khor (2011) | 459/351 | 5877/6627 | — | — | 1.47 (1.28–1.70) |
| Khor (2011) | — | — | 314 | 272 | 1.15 (0.98–1.36) |
| Onouchi (2012) | 720/136 | 5406/1352 | — | — | 1.32 (1.09–1.61) |
| Onouchi (2012) | 790/150 | 590/166 | — | — | 1.48 (1.16–1.89) |
| Onouchi (2012) | 482/86 | 910/228 | — | — | 1.40 (1.07–1.84) |
| Ji (2013) | 55/15 | 26/24 | — | — | 3.38 (1.53–7.50) |
| Yan (2013) | 528/188 | 1106/524 | — | — | 1.33 (1.09–1.62) |
| Current study (2013) | 609/239 | 652/330 | — | — | 1.29 (1.06–1.57) |
| Pooled OR | — | — | — | — | 1.35 (1.27–1.44) |
Fixed-effects OR, Q = 17.30, P heterogeneity = 0.139, p<0.001.
Figure 2The forest plot for the association between the A allelic variant and the risk of Kawasaki disease.
For each study, the estimate of OR and its 95% CI is plotted with a box and a horizontal line. Fixed-effects pooled OR = 1.35, 95% CI = 1.27–1.44, p<0.001; Q = 17.30, P heterogeneity = 0.139.
Figure 3The funnel plot of natural logarithm of OR against inverse standard error in each study.
Regression test for funnel plot asymmetry p = 0.224.