Literature DB >> 25092242

Theoretical study of the NLO responses of some natural and unnatural amino acids used as probe molecules.

S N Derrar1, M Sekkal-Rahal, P Derreumaux, M Springborg.   

Abstract

The first hyperpolarizabilities β of the natural aromatic amino acids tryptophan and tyrosine have been investigated using several methods and basis sets. Some of the theoretical results obtained were compared to the only experimental hyper-Rayleigh scattering data available. The sensitivity of tryptophan to its local environment was analyzed by constructing two-dimensional potential energy plots around the dipeptide tryptophan-lysine. Static hyperpolarizabilities β(0) of the found minima were calculated by a second-order Møller-Plesset (MP2) method in combination with the 6-31+G(d) basis set. Moreover, the efficiency of tryptophan and those of a series of unnatural amino acids as endogenous probe molecules were tested by calculating the nonlinear responses of some peptides. Impressive results were obtained for the amino acid ALADAN, which shows significantly improved nonlinear performance compared to other amino acids with weak nonlinear responses.

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Year:  2014        PMID: 25092242     DOI: 10.1007/s00894-014-2388-0

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  39 in total

1.  Second harmonic imaging microscopy.

Authors:  Andrew C Millard; Paul J Campagnola; William Mohler; Aaron Lewis; Leslie M Loew
Journal:  Methods Enzymol       Date:  2003       Impact factor: 1.600

2.  Quantitative second-harmonic generation microscopy in collagen.

Authors:  Patrick Stoller; Peter M Celliers; Karen M Reiser; Alexander M Rubenchik
Journal:  Appl Opt       Date:  2003-09-01       Impact factor: 1.980

3.  Optical second harmonic generation in biological systems.

Authors:  S Fine; W P Hansen
Journal:  Appl Opt       Date:  1971-10-01       Impact factor: 1.980

4.  Modeling the absorption spectrum of tryptophan in proteins.

Authors:  David M Rogers; Nicholas A Besley; Paul O'Shea; Jonathan D Hirst
Journal:  J Phys Chem B       Date:  2005-12-08       Impact factor: 2.991

5.  Self-consistent approach for simplifying the molecular interpretation of nonlinear optical and multiphoton phenomena.

Authors:  Andrew J Moad; Garth J Simpson
Journal:  J Phys Chem A       Date:  2005-02-24       Impact factor: 2.781

6.  Detection of protein conformational change by optical second-harmonic generation.

Authors:  Joshua S Salafsky
Journal:  J Chem Phys       Date:  2006-08-21       Impact factor: 3.488

7.  Detailed ab initio studies of the conformers and conformational distributions of gaseous tryptophan.

Authors:  Zhijian Huang; Zijing Lin
Journal:  J Phys Chem A       Date:  2005-03-24       Impact factor: 2.781

8.  Applicability of hybrid density functional theory methods to calculation of molecular hyperpolarizability.

Authors:  Kyrill Yu Suponitsky; Sergio Tafur; Artëm E Masunov
Journal:  J Chem Phys       Date:  2008-07-28       Impact factor: 3.488

9.  A self-consistent-field study of tryptophan.

Authors:  E Yeargers
Journal:  Biophys J       Date:  1968-12       Impact factor: 4.033

10.  Fluorescence of membrane-bound tryptophan octyl ester: a model for studying intrinsic fluorescence of protein-membrane interactions.

Authors:  A S Ladokhin; P W Holloway
Journal:  Biophys J       Date:  1995-08       Impact factor: 4.033

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