Literature DB >> 25090393

Complete mitochondrial genome of Caridina nilotica gracilipes.

Gangchun Xu1, Fukuan Du1, Zhijuan Nie1, Pao Xu1, Ruobo Gu1.   

Abstract

In this study, we sequenced the complete mitochondrial genome of Caridina nilotica gracilipes. This mitochondrial genome, consisting of 15,550 base pairs, encoded 13 protein-coding genes, 2 ribosomal RNAs, 22 transfer RNAs, and a non-coding control region as those found in other Decapoda, with the gene synteny identical to that of typical invertebrates. Control region (D-Loop), of 673 bp in length, is located between 12S rRNA and tRNA(Ile). The overall base composition of the heavy strand shows T 30.4%, C 22.0%, A 33.0% and G 14.6%, with an AT bias of 63.4%.

Entities:  

Keywords:  Atyidae; Caridina nilotica gracilipes; mitochondrial genome

Mesh:

Substances:

Year:  2014        PMID: 25090393     DOI: 10.3109/19401736.2014.945541

Source DB:  PubMed          Journal:  Mitochondrial DNA A DNA Mapp Seq Anal        ISSN: 2470-1394            Impact factor:   1.514


  3 in total

1.  Digging deeper: new gene order rearrangements and distinct patterns of codons usage in mitochondrial genomes among shrimps from the Axiidea, Gebiidea and Caridea (Crustacea: Decapoda).

Authors:  Mun Hua Tan; Han Ming Gan; Yin Peng Lee; Gary C B Poore; Christopher M Austin
Journal:  PeerJ       Date:  2017-03-01       Impact factor: 2.984

2.  The complete mitochondrial genome of Neocaridina heteropoda koreana Kubo, 1938 (Decapoda: Atyidae).

Authors:  Jonghyun Park; Yongsung Kim; Woochan Kwon; Hong Xi; Jongsun Park
Journal:  Mitochondrial DNA B Resour       Date:  2019-07-12       Impact factor: 0.658

3.  The complete mitogenome of Caridina indistincta 'sp. A' (Decapoda: Atyidae).

Authors:  Daniel J Schmidt
Journal:  Mitochondrial DNA B Resour       Date:  2018-08-16       Impact factor: 0.658

  3 in total

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