Literature DB >> 25084383

Overexpression, purification, crystallization and preliminary X-ray characterization of the fourth scaffoldin A cohesin from Acetivibrio cellulolyticus in complex with a dockerin from a family 5 glycoside hydrolase.

Pedro Bule1, Ana Correia1, Kate Cameron1, Victor D Alves1, Vânia Cardoso1, Carlos M G A Fontes1, Shabir Najmudin1.   

Abstract

Cellulosomes are cell-bound multienzyme complexes secreted by anaerobic bacteria that play a crucial role in carbon turnover by degrading plant cell walls to simple sugars. Integration of cellulosomal components occurs via highly ordered protein-protein interactions between cohesin modules located in a molecular scaffold and dockerin modules found in cellulosomal enzymes. Acetivibrio cellulolyticus possesses a complex cellulosome arrangement which is organized by a primary enzyme-binding scaffoldin (ScaA), two anchoring scaffoldins (ScaC and ScaD) and an unusual adaptor scaffoldin (ScaB). A dockerin from a family 5 glycoside hydrolase (GH5), which was engineered to inactivate one of the two putative cohesin-binding interfaces, complexed with one of the ScaA cohesins from A. cellulolyticus has been purified and crystallized, and data were processed to a resolution of 1.57 Å in the orthorhombic space group P212121.

Entities:  

Keywords:  Acetivibrio cellulolyticus; cellulosome; cohesin; dockerin

Mesh:

Substances:

Year:  2014        PMID: 25084383      PMCID: PMC4118805          DOI: 10.1107/S2053230X14013181

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  20 in total

1.  Escherichia coli expression, purification, crystallization, and structure determination of bacterial cohesin-dockerin complexes.

Authors:  Joana L A Brás; Ana Luisa Carvalho; Aldino Viegas; Shabir Najmudin; Victor D Alves; José A M Prates; Luís M A Ferreira; Maria J Romão; Harry J Gilbert; Carlos M G A Fontes
Journal:  Methods Enzymol       Date:  2012       Impact factor: 1.600

2.  Mechanism of bacterial cell-surface attachment revealed by the structure of cellulosomal type II cohesin-dockerin complex.

Authors:  Jarrett J Adams; Gour Pal; Zongchao Jia; Steven P Smith
Journal:  Proc Natl Acad Sci U S A       Date:  2005-12-29       Impact factor: 11.205

3.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

4.  iMOSFLM: a new graphical interface for diffraction-image processing with MOSFLM.

Authors:  T Geoff G Battye; Luke Kontogiannis; Owen Johnson; Harold R Powell; Andrew G W Leslie
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18

5.  Purification, crystallization and preliminary X-ray characterization of the third ScaB cohesin in complex with an ScaA X-dockerin from Acetivibrio cellulolyticus.

Authors:  Kate Cameron; Victor D Alves; Pedro Bule; Luís M A Ferreira; Carlos M G A Fontes; Shabir Najmudin
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-04-25       Impact factor: 1.056

6.  The Clostridium cellulolyticum dockerin displays a dual binding mode for its cohesin partner.

Authors:  Benedita A Pinheiro; Mark R Proctor; Carlos Martinez-Fleites; José A M Prates; Victoria A Money; Gideon J Davies; Edward A Bayer; Carlos M G A Fontesm; Henri-Pierre Fierobe; Harry J Gilbert
Journal:  J Biol Chem       Date:  2008-04-28       Impact factor: 5.157

Review 7.  Scaling and assessment of data quality.

Authors:  Philip Evans
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14

8.  Better models by discarding data?

Authors:  K Diederichs; P A Karplus
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2013-06-15

9.  Overview of the CCP4 suite and current developments.

Authors:  Martyn D Winn; Charles C Ballard; Kevin D Cowtan; Eleanor J Dodson; Paul Emsley; Phil R Evans; Ronan M Keegan; Eugene B Krissinel; Andrew G W Leslie; Airlie McCoy; Stuart J McNicholas; Garib N Murshudov; Navraj S Pannu; Elizabeth A Potterton; Harold R Powell; Randy J Read; Alexei Vagin; Keith S Wilson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18

10.  BALBES: a molecular-replacement pipeline.

Authors:  Fei Long; Alexei A Vagin; Paul Young; Garib N Murshudov
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2007-12-05
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  3 in total

1.  Structure-function analyses generate novel specificities to assemble the components of multienzyme bacterial cellulosome complexes.

Authors:  Pedro Bule; Kate Cameron; José A M Prates; Luís M A Ferreira; Steven P Smith; Harry J Gilbert; Edward A Bayer; Shabir Najmudin; Carlos M G A Fontes; Victor D Alves
Journal:  J Biol Chem       Date:  2018-01-24       Impact factor: 5.157

2.  Single Binding Mode Integration of Hemicellulose-degrading Enzymes via Adaptor Scaffoldins in Ruminococcus flavefaciens Cellulosome.

Authors:  Pedro Bule; Victor D Alves; André Leitão; Luís M A Ferreira; Edward A Bayer; Steven P Smith; Harry J Gilbert; Shabir Najmudin; Carlos M G A Fontes
Journal:  J Biol Chem       Date:  2016-11-14       Impact factor: 5.157

3.  Higher order scaffoldin assembly in Ruminococcus flavefaciens cellulosome is coordinated by a discrete cohesin-dockerin interaction.

Authors:  Pedro Bule; Virgínia M R Pires; Victor D Alves; Ana Luísa Carvalho; José A M Prates; Luís M A Ferreira; Steven P Smith; Harry J Gilbert; Ilit Noach; Edward A Bayer; Shabir Najmudin; Carlos M G A Fontes
Journal:  Sci Rep       Date:  2018-05-03       Impact factor: 4.379

  3 in total

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