Literature DB >> 25077649

Identification of OSBPL2 as a novel candidate gene for progressive nonsyndromic hearing loss by whole-exome sequencing.

Guangqian Xing1, Jun Yao2, Bin Wu3, Tingting Liu1, Qinjun Wei2, Cheng Liu1, Yajie Lu2, Zhibin Chen1, Heng Zheng4, Xiaonan Yang3, Xin Cao2.   

Abstract

PURPOSE: Various forms of hearing loss have genetic causes, but many of the responsible genes have not yet been identified. Here, we describe a large seven-generation Chinese family with autosomal dominant nonsyndromic hearing loss that has been excluded as being caused by known deafness gene mutations associated with autosomal dominant nonsyndromic hearing loss with the aim of identifying a novel causative gene involved in deafness.
METHODS: Whole-exome sequencing was conducted in three affected family members, and cosegregation analysis was performed on other members of the family.
RESULTS: Whole-exome sequencing and subsequent segregation analysis identified a heterozygous frameshift mutation (c.153_154delCT, p.Gln53Argfs*100) in the oxysterol binding protein-like 2 (OSBPL2) gene in 25 affected family members. The deletion mutation is predicted to lead to premature truncation of the OSBPL2 protein. Modeling and structure-based analysis support the theory that this gene deletion is functionally deleterious. Our finding was further confirmed by the detection of another missense mutation, a c.583C>A transversion (p.Leu195Met) in exon 7 of OSBPL2, in an additional sporadic case of deafness.
CONCLUSION: Based on this study, OSBPL2 was identified as an excellent novel candidate gene for autosomal dominant nonsyndromic hearing loss; this study is the first to implicate OSBPL2 mutations in autosomal dominant nonsyndromic hearing loss.

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Year:  2014        PMID: 25077649     DOI: 10.1038/gim.2014.90

Source DB:  PubMed          Journal:  Genet Med        ISSN: 1098-3600            Impact factor:   8.822


  38 in total

Review 1.  Identification of genes for childhood heritable diseases.

Authors:  Kym M Boycott; David A Dyment; Sarah L Sawyer; Megan R Vanstone; Chandree L Beaulieu
Journal:  Annu Rev Med       Date:  2014       Impact factor: 13.739

2.  A frameshift mutation in GRXCR2 causes recessively inherited hearing loss.

Authors:  Ayesha Imtiaz; David C Kohrman; Sadaf Naz
Journal:  Hum Mutat       Date:  2014-04-07       Impact factor: 4.878

3.  Structure of Osh3 reveals a conserved mode of phosphoinositide binding in oxysterol-binding proteins.

Authors:  Junsen Tong; Huiseon Yang; Hongyuan Yang; Soo Hyun Eom; Young Jun Im
Journal:  Structure       Date:  2013-06-20       Impact factor: 5.006

4.  TGM6 identified as a novel causative gene of spinocerebellar ataxias using exome sequencing.

Authors:  Jun Ling Wang; Xu Yang; Kun Xia; Zheng Mao Hu; Ling Weng; Xin Jin; Hong Jiang; Peng Zhang; Lu Shen; Ji Feng Guo; Nan Li; Ying Rui Li; Li Fang Lei; Jie Zhou; Juan Du; Ya Fang Zhou; Qian Pan; Jian Wang; Jun Wang; Rui Qiang Li; Bei Sha Tang
Journal:  Brain       Date:  2010-11-23       Impact factor: 13.501

5.  Oxysterol binding protein induces upregulation of SREBP-1c and enhances hepatic lipogenesis.

Authors:  Daoguang Yan; Markku Lehto; Laura Rasilainen; Jari Metso; Christian Ehnholm; Seppo Ylä-Herttuala; Matti Jauhiainen; Vesa M Olkkonen
Journal:  Arterioscler Thromb Vasc Biol       Date:  2007-02-15       Impact factor: 8.311

6.  Lipid and C-reactive protein levels as risk factors for hearing loss in older adults.

Authors:  Annie N Simpson; Lois J Matthews; Judy R Dubno
Journal:  Otolaryngol Head Neck Surg       Date:  2013-01-15       Impact factor: 3.497

Review 7.  The diverse functions of oxysterol-binding proteins.

Authors:  Sumana Raychaudhuri; William A Prinz
Journal:  Annu Rev Cell Dev Biol       Date:  2010       Impact factor: 13.827

8.  OSBP-related protein 2 is a sterol receptor on lipid droplets that regulates the metabolism of neutral lipids.

Authors:  Riikka Hynynen; Monika Suchanek; Johanna Spandl; Nils Bäck; Christoph Thiele; Vesa M Olkkonen
Journal:  J Lipid Res       Date:  2009-02-17       Impact factor: 5.922

9.  Identity-by-descent-guided mutation analysis and exome sequencing in consanguineous families reveals unusual clinical and molecular findings in retinal dystrophy.

Authors:  Frauke Coppieters; Kristof Van Schil; Miriam Bauwens; Hannah Verdin; Annelies De Jaegher; Delfien Syx; Tom Sante; Steve Lefever; Nouha Bouayed Abdelmoula; Fanny Depasse; Ingele Casteels; Thomy de Ravel; Françoise Meire; Bart P Leroy; Elfride De Baere
Journal:  Genet Med       Date:  2014-03-13       Impact factor: 8.822

10.  Exome sequencing and linkage analysis identified tenascin-C (TNC) as a novel causative gene in nonsyndromic hearing loss.

Authors:  Yali Zhao; Feifan Zhao; Liang Zong; Peng Zhang; Liping Guan; Jianguo Zhang; Dayong Wang; Jing Wang; Wei Chai; Lan Lan; Qian Li; Bing Han; Ling Yang; Xin Jin; Weiyan Yang; Xiaoxiang Hu; Xiaoning Wang; Ning Li; Yingrui Li; Christine Petit; Jun Wang; Huanming Yang Jian Wang; Qiuju Wang
Journal:  PLoS One       Date:  2013-07-30       Impact factor: 3.240

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  21 in total

Review 1.  Whole-exome sequencing and its impact in hereditary hearing loss.

Authors:  Tahir Atik; Guney Bademci; Oscar Diaz-Horta; Susan H Blanton; Mustafa Tekin
Journal:  Genet Res (Camb)       Date:  2015-03-31       Impact factor: 1.588

Review 2.  Gene therapy development in hearing research in China.

Authors:  Zhen Zhang; Jiping Wang; Chunyan Li; Wenyue Xue; Yazhi Xing; Feng Liu
Journal:  Gene Ther       Date:  2020-07-17       Impact factor: 5.250

Review 3.  Bridging the molecular and biological functions of the oxysterol-binding protein family.

Authors:  Antonietta Pietrangelo; Neale D Ridgway
Journal:  Cell Mol Life Sci       Date:  2018-03-13       Impact factor: 9.261

4.  Targeted gene capture and massively parallel sequencing identify TMC1 as the causative gene in a six-generation Chinese family with autosomal dominant hearing loss.

Authors:  Xue Gao; Sha-Sha Huang; Yong-Yi Yuan; Guo-Jian Wang; Jin-Cao Xu; Yu-Bin Ji; Ming-Yu Han; Fei Yu; Dong-Yang Kang; Xi Lin; Pu Dai
Journal:  Am J Med Genet A       Date:  2015-06-16       Impact factor: 2.802

Review 5.  Navigating genetic diagnostics in patients with hearing loss.

Authors:  Christina M Sloan-Heggen; Richard J H Smith
Journal:  Curr Opin Pediatr       Date:  2016-12       Impact factor: 2.856

6.  Oxysterol-binding protein-like 2 contributes to the developmental progression of preadipocytes by binding to β-catenin.

Authors:  Tianming Wang; Tianyu Zhang; Youzhi Tang; Hongshun Wang; Qinjun Wei; Yajie Lu; Jun Yao; Yuan Qu; Xin Cao
Journal:  Cell Death Discov       Date:  2021-05-17

7.  OSBPL2 encodes a protein of inner and outer hair cell stereocilia and is mutated in autosomal dominant hearing loss (DFNA67).

Authors:  Michaela Thoenes; Ulrike Zimmermann; Inga Ebermann; Martin Ptok; Morag A Lewis; Holger Thiele; Susanne Morlot; Markus M Hess; Andreas Gal; Tobias Eisenberger; Carsten Bergmann; Gudrun Nürnberg; Peter Nürnberg; Karen P Steel; Marlies Knipper; Hanno Jörn Bolz
Journal:  Orphanet J Rare Dis       Date:  2015-02-10       Impact factor: 4.123

Review 8.  Genetics of Nonsyndromic Congenital Hearing Loss.

Authors:  Oguz Kadir Egilmez; M Tayyar Kalcioglu
Journal:  Scientifica (Cairo)       Date:  2016-02-18

Review 9.  OSBP-Related Protein Family in Lipid Transport Over Membrane Contact Sites.

Authors:  Vesa M Olkkonen
Journal:  Lipid Insights       Date:  2015-11-12

10.  Small fish, big prospects: using zebrafish to unravel the mechanisms of hereditary hearing loss.

Authors:  Barbara Vona; Julia Doll; Michaela A H Hofrichter; Thomas Haaf; Gaurav K Varshney
Journal:  Hear Res       Date:  2020-02-06       Impact factor: 3.208

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