Literature DB >> 25075900

Proper reporting of predictor performance.

Mauno Vihinen1.   

Abstract

Mesh：

Year:  2014        PMID： 25075900     DOI： 10.1038/nmeth.3032

Source DB:  PubMed          Journal:  Nat Methods        ISSN： 1548-7091            Impact factor:   28.547


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  5 in total

1.  Guidelines for reporting and using prediction tools for genetic variation analysis.

Authors:  Mauno Vihinen
Journal:  Hum Mutat       Date:  2013-01-18       Impact factor: 4.878

2.  VariBench: a benchmark database for variations.

Authors:  Preethy Sasidharan Nair; Mauno Vihinen
Journal:  Hum Mutat       Date:  2012-10-11       Impact factor: 4.878

3.  Evolutionary diagnosis method for variants in personal exomes.

Authors:  Sudhir Kumar; Maxwell Sanderford; Vanessa E Gray; Jieping Ye; Li Liu
Journal:  Nat Methods       Date:  2012-09       Impact factor: 28.547

4.  Performance of mutation pathogenicity prediction methods on missense variants.

Authors:  Janita Thusberg; Ayodeji Olatubosun; Mauno Vihinen
Journal:  Hum Mutat       Date:  2011-02-22       Impact factor: 4.878

5.  How to evaluate performance of prediction methods? Measures and their interpretation in variation effect analysis.

Authors:  Mauno Vihinen
Journal:  BMC Genomics       Date:  2012-06-18       Impact factor: 3.969
  5 in total
  5 in total

1.  Reply to: "Proper reporting of predictor performance".

Authors:  Sudhir Kumar; Jieping Ye; Li Liu
Journal:  Nat Methods       Date:  2014-08       Impact factor: 28.547

2.  Predictor performance with stratified data and imbalanced classes.

Authors:  Eric A Stone
Journal:  Nat Methods       Date:  2014-08       Impact factor: 28.547

3.  On human disease-causing amino acid variants: statistical study of sequence and structural patterns.

Authors:  Marharyta Petukh; Tugba G Kucukkal; Emil Alexov
Journal:  Hum Mutat       Date:  2015-04-06       Impact factor: 4.878

4.  Investigating the linkage between disease-causing amino acid variants and their effect on protein stability and binding.

Authors:  Yunhui Peng; Emil Alexov
Journal:  Proteins       Date:  2016-01-11

5.  SAAMBE-3D: Predicting Effect of Mutations on Protein-Protein Interactions.

Authors:  Swagata Pahari; Gen Li; Adithya Krishna Murthy; Siqi Liang; Robert Fragoza; Haiyuan Yu; Emil Alexov
Journal:  Int J Mol Sci       Date:  2020-04-07       Impact factor: 5.923
  5 in total

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