| Literature DB >> 25054136 |
Narender Kumar1, Akhil Kapoor2, Ashok Kalwar3, Satya Narayan2, Mukesh Kumar Singhal2, Akhender Kumar4, Abhishek Mewara5, Megh Raj Bardia2.
Abstract
BACKGROUND: ABO blood group and risk of squamous cell carcinoma of esophagus have been reported by many studies, but there is no discipline that had provided association with the genotype and gene frequency by population statics.Entities:
Mesh:
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Year: 2014 PMID: 25054136 PMCID: PMC4089147 DOI: 10.1155/2014/286810
Source DB: PubMed Journal: Biomed Res Int Impact factor: 3.411
Hardy-Weinberg model for ABO blood group.
| Phenotype (blood group) | Genotype | Phenotypic frequency | Genotypic frequency | Expected frequency |
|---|---|---|---|---|
| A | AA + AO |
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| B | BB + BO |
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| AB | AB |
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| 2 |
| O | OO |
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Hardy-Weinberg equation for ABO blood group is as follows:
p + q + r = 1,
p 2 + q 2 + r 2 + 2pq + 2pr + 2qr = 1.
Frequency of ABO blood group and Rh antigen.
|
| A | AB | B | O | Rh+ | Rh− | |
|---|---|---|---|---|---|---|---|
| All | |||||||
| Cases | 480 | 98 (20.4) | 58 (12.1) | 226 (47.1) | 98 (20.4) | 424 (88.3) | 56 (11.7) |
| Control | 480 | 106 (22.1) | 43 (8.9) | 178 (37.1) | 153 (31.9) | 456 (95) | 24 (5) |
| Male | |||||||
| Cases | 252 | 48 (19) | 41 (16.3) | 106 (42.1) | 57 (22.6) | 228 (90.5) | 24 (9.5) |
| Control | 240 | 50 (20.9) | 22 (9.1) | 91 (37.9) | 77 (32.1) | 230 (95.8) | 10 (4.2) |
| Female | |||||||
| Cases | 228 | 50 (21.9) | 17 (7.5) | 120 (52.6) | 41 (18) | 196 (86) | 32 (14) |
| Control | 240 | 55 (22.9) | 22 (9.2) | 86 (35.8) | 77 (32.1) | 226 (94.2) | 14 (5.8) |
| Site of cancer (case) | |||||||
| Upper | 86 | 19 (22.1) | 7 (8.1) | 38 (44.2) | 22 (25.6) | 79 (91.9) | 7 (8.1) |
| Middle | 192 | 32 (16.7) | 19 (9.9) | 90 (46.9) | 51 (26.5) | 170 (88.5) | 22 (11.5) |
| Lower | 202 | 47 (23.3) | 32 (15.8) | 98 (48.5) | 25 (12.4) | 175 (86.6) | 27 (13.4) |
Values in parentheses are percentages.
Chi-square test value and significance of ABO blood group and Rh status.
| Cases ∗ control ( | ABO blood group | Rh status | ||
|---|---|---|---|---|
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| All | 20.296 | 0.0001 | 13.964 | 0.0001 |
| Male | 9.611 | 0.0221 | 5.484 | 0.0191 |
| Female | 17.177 | 0.0006 | 8.874 | 0.0028 |
| Site of cancer | ||||
| Upper | 1.348 | 0.717 | 0.785 | 0.375 |
| Middle | 2.3447 | 0.484 | 2.791 | 0.094 |
| Lower | 12.06 | 0.007 | 4.223 | 0.039 |
Degree of freedom = 1.
Presence of B antigen (B and AB blood groups) and absence of B antigen (O and A blood groups); Chi-square test with significance and odd ratio.
|
| Presence of B (B + AB) | Absence of B (O + A) | Chi-square |
| Odds ratio | CI = 95% | |
|---|---|---|---|---|---|---|---|
| All | |||||||
| Cases | 480 | 284 (59.17) | 196 (40.83) | 16.58 | <0.0001 | 1.69 | 1.31–2.19 |
| Control | 480 | 221 (46.04) | 259 (53.96) | ||||
| Male | |||||||
| Cases | 252 | 147 (58.33) | 105 (41.67) | 6.24 | 0.012 | 1.57 | 1.10–2.24 |
| Control | 240 | 113 (47.1) | 127 (52.9) | ||||
| Female | |||||||
| Cases | 228 | 137 (60.1) | 91 (39.9) | 10.67 | 0.001 | 1.84 | 1.27–2.65 |
| Control | 240 | 108 (45) | 132 (55) | ||||
| Site of cancer (case) | |||||||
| Upper | 86 | 45 (52.3) | 41 (47.7) | 0.212 | 0.645 | ||
| Middle | 192 | 109 (56.77) | 83 (43.23) | 1.833 | 0.175 | ||
| Lower | 202 | 130 (64.36) | 72 (35.64) | 8.248 | 0.004 |
Degree of freedom = 1.
Values in parentheses are percentages.
Gene frequency of allele with its significance.
| Group | Gene frequency | Hardy-Weinberg log likelihood |
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|---|---|---|---|---|---|---|
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| ||||
| Control | 0.169 (0.012) | 0.265 (0.015) | 0.565 (0.017) | −615.3477 | 0.002 | 0.964 |
| Total EC | 0.179 (0.013) | 0.362 (0.017) | 0.458 (0.018) | −604.5129 | 0.5856 | 0.444 |
| Male | 0.193 (0.018) | 0.349 (0.024) | 0.456 (0.025) | −331.8725 | 2.6853 | 0.101 |
| Female | 0.163 (0.018) | 0.377 (0.026) | 0.459 (0.027) | −271.8815 | 8.4190 | 0.003 |
| Upper | 0.166 (0.029) | 0.312 (0.039) | 0.521 (0.042) | −107.6611 | 0.7385 | 0.390 |
| Middle | 0.143 (0.018) | 0.342 (0.027) | 0.514 (0.029) | −237.0872 | 0.0039 | 0.950 |
| Lower | 0.222 (0.022) | 0.408 (0.028) | 0.369 (0.029) | −251.2710 | 1.2961 | 0.255 |
Values in parentheses are standard deviations.